HHsearch alignment of GI: 254780148 and MMDB domain: 3h7h_B_
>3h7h_B (B:) Transcription elongation factor SPT5; helices surrounding beta sheet, activator, metal-binding, nucleus, repressor, transcription regulation, zinc; 1.55A {Homo sapiens}
Probab=97.63 E-value=3.2e-05 Score=50.93 Aligned_cols=87 Identities=15% Similarity=0.207 Sum_probs=58.4
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHCCC---HHHCCEEEEECCCCEEEECCEEEEEECCEECEEEEEEEECCCCCHHH
Q ss_conf 886189995288538999999999997798---11143266313101277202035664120330999999618652244
Q gi|254780148|r 2 TPRWYIVQVYSNCEKKAVESIGGRLSRSGL---DHLVTEITIPSERVVSVRKGRKVNSERRFFPGYVLIKAVMTDKVYHT 78 (177)
Q Consensus 2 ~~~Wyvv~t~~~~E~~v~~~L~~~~~~~~~---~~~~~~v~~P~~~~~~~~~g~~~~~~~plfpgYiFv~~~~~~~~~~~ 78 (177)
+|+-|+++|++|+|+.++..|.++...... +-.++.+|.| +=++|||||++....+....
T Consensus 5 DP~i~~Vk~~~G~Er~va~~l~~k~~~~~~~~~~l~I~Sv~~~-----------------~~lkGyIyVEA~~~~~V~~a 67 (106)
T 3h7h_B 5 DPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAP-----------------EHVKGYIYVEAYKQTHVKQA 67 (106)
T ss_dssp CCEEEEEECCTTCHHHHHHHHHHHHHHHTTSSSCCCCCEEEEC-----------------TTCCSEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-----------------CCCCEEEEEEECCHHHHHHH
T ss_conf 9977999868980899999999999873246997650799824-----------------88836899987988999999
Q ss_pred HHCCCEEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 420330366432788610025889999997
Q gi|254780148|r 79 IKDTPKVIGFLGTGENPSPVTDSEIEHIMN 108 (177)
Q Consensus 79 i~~t~gV~~~l~~~~~P~~i~~~ei~~l~~ 108 (177)
++..+++.+.+ ..+..+|-+||.+++.
T Consensus 68 i~gi~~v~~~~---~~~~lVp~~E~~~~l~ 94 (106)
T 3h7h_B 68 IEGVGNLRLGY---WNQQMVPIKEMTDVLK 94 (106)
T ss_dssp HTTCGGGGGGS---SCCEECCGGGTTGGGC
T ss_pred HHCCHHHCCCC---CCCCEECHHHHHHHCC
T ss_conf 85212212556---8461774999776551