HHsearch results for GI: 254780148 and protein with PDBid: 1nz9_A

>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=99.55  E-value=8.3e-15  Score=107.37  Aligned_cols=56  Identities=50%  Similarity=0.841  Sum_probs=53.8

Q ss_pred             CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHHEE
Q ss_conf             12347897799951877897199999828898899999816870478856787123
Q gi|254780148|r  120 SVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQVEK  175 (177)
Q Consensus       120 ~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~iek  175 (177)
                      ...|++||.|+|++|||+|++|.|.++|.+++|++|+++||||.|+|+++++||||
T Consensus         2 ~v~F~~Gd~V~V~~GpF~g~~g~V~~i~~~~~rv~Vll~ifGr~t~vel~~~~veK   57 (58)
T 1nz9_A            2 QVAFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTIFGRETPVELDFSQVVK   57 (58)
T ss_dssp             CCSCCTTCEEEECSGGGTTCEEEEEEEETTTTEEEEEEESSSSEEEEEECGGGEEE
T ss_pred             CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEECHHHEEC
T ss_conf             22306999999903689998999999918899999999944998237369899870