HHsearch results for GI: 254780148 and protein with PDBid: 2e6z_A

>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.11  E-value=0.00046  Score=43.01  Aligned_cols=54  Identities=20%  Similarity=0.302  Sum_probs=43.9

Q ss_pred             CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHHEE
Q ss_conf             12347897799951877897199999828898899999816870478856787123
Q gi|254780148|r  120 SVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQVEK  175 (177)
Q Consensus       120 ~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~iek  175 (177)
                      ...|.+||.|+|..|-++|+.|.|.+++.  ..++|..+.-+=..+++++..+|+|
T Consensus         5 ~~~F~~GD~VeV~~GEl~~l~G~V~~v~~--d~Vti~p~~~~L~~~l~fp~~~LrK   58 (59)
T 2e6z_A            5 SSGFQPGDNVEVCEGELINLQGKILSVDG--NKITIMPKHEDLKDMLEFPAQELRK   58 (59)
T ss_dssp             CSSCCTTSEEEECSSTTTTCEEEECCCBT--TEEEEEECCSSCCSCEEEETTTEEE
T ss_pred             CCCCCCCCEEEEECCEECCCEEEEEEECC--CEEEEEECCCCCCCCEEECHHHCCC
T ss_conf             36549999899922676377999999729--9999977740358507607898734