HHsearch results for GI: 254780148 and protein with PDBid: 2j01_Y

>2j01_Y 50S ribosomal protein L24; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: b.34.5.1 PDB: 1vsp_S 2hgj_X 2hgq_X 2hgu_X 1vsa_S 2j03_Y 2jl6_Y 2jl8_Y 2v47_Y 2v49_Y 2wdi_Y 2wdj_Y 2wdl_Y 2wdn_Y 2wh2_Y 2wh4_Y 2wrj_Y 2wrl_Y 2wro_Y 2wrr_Y ...

Probab=92.70  E-value=0.0076  Score=35.76  Aligned_cols=40  Identities=35%  Similarity=0.410  Sum_probs=33.3

Q ss_pred             CCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE-EEEC
Q ss_conf             234789779995187789719999982889889999-9816
Q gi|254780148|r  121 VFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVE-VVIF  160 (177)
Q Consensus       121 ~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~-v~i~  160 (177)
                      ..+..||.|.|++|+.+|-.|.|.+++.+++++.|. +++-
T Consensus         5 ~kikkGD~V~VisGkdKGK~G~Vl~V~~~~~~ViVeGvN~~   45 (110)
T 2j01_Y            5 MHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNIV   45 (110)
T ss_dssp             CCSCCSSCEECCSSTTSSCCBSCCCCCCTTCBCCTTSCCCC
T ss_pred             CEEECCCEEEEEECCCCCCEEEEEEEECCCCEEEEECCEEE
T ss_conf             48757999999168889971789999898999999783756