HHSEARCH alignment of GI: 254780148 and SCOP domain: d1nppa2

Alignment

Probab=99.58  E-value=1.4e-15  Score=110.54  Aligned_cols=57  Identities=53%  Similarity=0.887  Sum_probs=54.4

Q ss_pred             CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHHEEC
Q ss_conf             123478977999518778971999998288988999998168704788567871233
Q gi|254780148|r  120 SVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQVEKI  176 (177)
Q Consensus       120 ~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~ieki  176 (177)
                      ...|++||.|+|++|||+|++|.|.++|.+++|++|++++|||.|+|+++++||+||
T Consensus         2 kvdf~~Gd~V~I~~GpF~g~~g~V~~i~~~~~rv~V~v~~fGr~t~vel~~~~veki   58 (58)
T d1nppa2           2 KVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI   58 (58)
T ss_dssp             SCSCCTTCEEEECSSTTTTCEEEEEEEEGGGTEEEEEEEETTEEEEEEEEGGGEEEC
T ss_pred             CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEECHHHEEEC
T ss_conf             655259999999126899989999998288999999996009983586688998949

SCOP domain information

class: All beta proteins
fold: SH3-like barrel
superfamily: Translation proteins SH3-like domain
family: N-utilization substance G protein NusG, C-terminal domain
domain: N-utilization substance G protein NusG, C-terminal domain
species: Aquifex aeolicus [TaxId: 63363]