HHSEARCH alignment of GI: 254780148 and SCOP domain: d1nz8a_

Alignment
>d1nz8a_ d.58.42.1 (A:) N-utilization substance G protein NusG, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=99.97  E-value=1.5e-30  Score=200.17  Aligned_cols=110  Identities=31%  Similarity=0.674  Sum_probs=101.7

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCEEEE-CCEEEEEECCEECEEEEEEEECCC-----CC
Q ss_conf             886189995288538999999999997798111432663131012772-020356641203309999996186-----52
Q gi|254780148|r    2 TPRWYIVQVYSNCEKKAVESIGGRLSRSGLDHLVTEITIPSERVVSVR-KGRKVNSERRFFPGYVLIKAVMTD-----KV   75 (177)
Q Consensus         2 ~~~Wyvv~t~~~~E~~v~~~L~~~~~~~~~~~~~~~v~~P~~~~~~~~-~g~~~~~~~plfpgYiFv~~~~~~-----~~   75 (177)
                      +++||||+|+||+|++|+++|+++++..+++++++++++|++++...+ +|+++.+.+|+|||||||++++++     ++
T Consensus         1 ~mkWYvl~t~sg~E~~v~~~L~~~i~~~~l~~~~~~v~vP~e~~~~~k~~gkk~~~~~~lFPGYvfV~~~~~d~~~~~~~   80 (119)
T d1nz8a_           1 SIEWYAVHTLVGQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVVELREGGKKEVVRKKLFPGYLFIQMDLGDEEEPNEA   80 (119)
T ss_dssp             CCEEEEEECCTTTHHHHHHHHHHHHHHHTCTTTCCEEECSEEEEEEECSSSCEEEEEEESSTTEEEEEECCCSSSSCCHH
T ss_pred             CCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCHHH
T ss_conf             96599999578938999999999998846432244232374568999925632773024588389999864765443026


Q ss_pred             HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             244420330366432788610025889999997653
Q gi|254780148|r   76 YHTIKDTPKVIGFLGTGENPSPVTDSEIEHIMNQVE  111 (177)
Q Consensus        76 ~~~i~~t~gV~~~l~~~~~P~~i~~~ei~~l~~~~~  111 (177)
                      |+.|++|+||++||+++++|.||+++||++|+...+
T Consensus        81 ~~~Ir~t~gV~~fvg~~~~P~pv~~~Ei~~il~~~g  116 (119)
T d1nz8a_          81 WEVVRGTPGITGFVGAGMRPVPLSPDEVRHILEVSG  116 (119)
T ss_dssp             HHHHHHSTTCCCCCCSSSSSCBCCHHHHHHHHHHHT
T ss_pred             HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHC
T ss_conf             789853898069868998606489999999999857


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: N-utilization substance G protein NusG, N-terminal domain
family: N-utilization substance G protein NusG, N-terminal domain
domain: N-utilization substance G protein NusG, N-terminal domain
species: Thermus thermophilus [TaxId: 274]