PSIBLAST alignment of GI: 254780148 and protein with PDB id: 3p8b
gi|320089854|pdb|3P8B|B Chain B, X-Ray Crystal Structure Of Pyrococcus Furiosus Transcription Elongation Factor Spt45 Length = 152
>gi|320089856|pdb|3P8B|D Chain D, X-Ray Crystal Structure Of Pyrococcus Furiosus Transcription Elongation Factor Spt45 Length = 152
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 31/155 (20%)
Query: 1 MTPRWYIVQVYSNCEKKAVESIGGRLSRSGLDHLVTEITIPSERVVSVRKGRKVNSERRF 60
M + + V+V E+ + I ++ L + I PS
Sbjct: 1 MAGKIFAVRVTHGQEETTAKLIYSKVRTYNLP--IYAILAPSR----------------- 41
Query: 61 FPGYVLIKAVMTDKVYHTIKDTPKVIGFLGTGENPSPVTDSEIEHIMNQVEAAVQRPVSS 120
GY+ ++A V I+ G L P + E ++ +
Sbjct: 42 VKGYIFVEAPNKGVVDEAIRGIRHARGVLPG---EVPFKEIEH---------FLEEKPAV 89
Query: 121 VFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHV 155
E G+ V V GPF V +DE K V V
Sbjct: 90 SGLEPGDLVEVIAGPFKGQKAKVVKIDESKDEVVV 124