HHsearch alignment of GI: 254780149 and MMDB domain: 2ww9_B_

>2ww9_B (B:) Protein transport protein SSS1; ribonucleoprotein, transmembrane, phosphoprotein, signal sequence, membrane, ribosome, cytoplasm; 8.60A {Saccharomyces cerevisiae} PDB: 2wwa_B
Probab=91.58  E-value=1  Score=24.46  Aligned_cols=50  Identities=18%  Similarity=-0.001  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             55999999999999873489889999999999999999999999999999
Q gi|254780149|r    6 LAVLNFFKQVRDESKKIFWPSRSEVLVSVIVVIIMLSISSVFFLVIDQSI   55 (67)
Q Consensus         6 ~~i~~f~~ev~~ElkkV~WPt~~e~~~~T~~Vi~~~~i~~~~i~~~D~~~   55 (67)
                      ..+.+|++|.+.-++|.+=|+|+|-.+...++-+--+++|++=+.+..++
T Consensus        23 ~~~~eF~kd~~r~lk~c~KP~~kEf~~ia~a~~iGf~imG~IGf~IkLI~   72 (80)
T 2ww9_B           23 EAPVEFVREGTQFLAKCKKPDLKEYTKIVKAVGIGFIAVGIIGYAIKLIH   72 (80)
T ss_dssp             HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             98999999989999996499889999999999998999999999999731