HHsearch alignment for GI: 254780150 and conserved domain: CHL00071
>CHL00071 tufA elongation factor Tu.
Probab=100.00 E-value=0 Score=725.86 Aligned_cols=391 Identities=56% Similarity=0.923 Sum_probs=355.6
Q ss_pred CCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH----HCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEE
Q ss_conf 9612421038827999990468988789999998764442----001312686869862920637899982199089998
Q gi|254780150|r 1 MVEKRYVRNKESLGLSTIGHVDHGKTTLTAAITKYYSEEK----KEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHI 76 (392)
Q Consensus 1 m~~~~~~~~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~----~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~ii 76 (392)
T Consensus 1 ~~~~~~~~~k~~vni~~~GHVD~GKSTL~g~L~~~~~~~~~~~~~~~~~~D~~~eEr~rGiTid~~~~~~et~~~~~~~i 80 (409)
T CHL00071 1 MAREKFERKKPHVNIGTIGHVDHGKTTLTAAITMTLAANGGAKGKKYDEIDSAPEEKARGITINTAHVEYETENRHYAHV 80 (409)
T ss_pred CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCEEEECEEEEECCCEEEEEE
T ss_conf 96000368998699999954588399999998645300451334315532379768736944880248996287599998
Q ss_pred ECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEE
Q ss_conf 47873024677987740023314520123443321067788886318760233100233356122211012321001110
Q gi|254780150|r 77 DCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKE 156 (392)
Q Consensus 77 D~PGH~~f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~ 156 (392)
T Consensus 81 D~PGH~~fv~nmi~Gas~aD~alLVV~A~~G~~~QTkEHl~l~~~lgV~~~IVavnKmD~v~~~~~~e~i~~~i~~~l~~ 160 (409)
T CHL00071 81 DCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTKEHILLAKQVGVPNIVVFLNKEDQVDDEELLELVELEVRELLDK 160 (409)
T ss_pred ECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 67967899999875230158128999868788500499999999739993655555679854899999999999999997
Q ss_pred EEEEE-EEECCCCEEEEEEECCC-------CCCCCCCC-CCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEE
Q ss_conf 14532-21023311467641144-------45652123-32034431025222210000110000000135544543014
Q gi|254780150|r 157 HKYSD-DTPIIRGSALCALQGTN-------KELGEDSI-HALMKAVDTHIPTPQRSLDAPFLMHIEGSCGIEGRGTVVTG 227 (392)
Q Consensus 157 ~~~~~-~~pii~~sa~~g~~~~n-------~~~~~~~~-~~Ll~~i~~~~~~p~~~~~~p~r~~I~~vf~i~g~G~Vv~G 227 (392)
T Consensus 161 ~g~~~~~i~~vp~sa~~~~~~~~~~~~~~~~~~~w~~~~~~Ll~~l~~~~p~~~r~~~~p~r~~Id~vf~v~G~GtVv~G 240 (409)
T CHL00071 161 YDFPGDEIPIVAGSALLALEALIENPKIKRGENKWVDKIYNLMDAVDSYIPTPERDTDKPFLMAIEDVFSITGRGTVATG 240 (409)
T ss_pred CCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEECCCCEEEEEE
T ss_conf 39984556089652133234312587545565612447999999887237788887677606442214753897889999
Q ss_pred EEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECHHEEECCCCCCCCEEEEEEE
Q ss_conf 87424534896799950687432125412100121144321001366641124543220211773267776300016899
Q gi|254780150|r 228 CIKRGRIKAGSDVEIIGMGGKKLKVKCTDVEMFRKKLDEAIAGDNVGLLLRGVNRADVPRGRVVCAPGSIQEYSRFRASV 307 (392)
Q Consensus 228 rV~sG~l~~Gd~i~i~p~~~~~~~~kv~si~~~~~~v~~a~aGd~v~l~Lkgi~~~di~rGdvl~~~~~~~~~~~f~A~i 307 (392)
T Consensus 241 ~v~sG~v~~Gd~v~i~~~~-~~~~~~VksI~~~~~~~~~a~aG~~v~l~L~gi~~~~I~rG~VL~~p~~~~~~~~F~A~I 319 (409)
T CHL00071 241 RIERGTVKVGDTVEIVGLR-ETRTTTVTGLEMFQKTLDEGLAGDNVGILLRGIQKEDIERGMVLAKPGTITPHTKFEAQV 319 (409)
T ss_pred EEEECCCCCCCEEEEEECC-CCCEEEEEEEEECCCCCCEECCCCEEEEEECCCCHHHCCCEEEEECCCCCCCCEEEEEEE
T ss_conf 9914563499989999769-986079999998895988887998899997599878877468996899998731999999
Q ss_pred EEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEEEC-----CCHHHHCCCCEEEEEEEECCCEEECCCCEEEEEECCEEE
Q ss_conf 971056787555511597899995414777999961-----895570789769999997781775469849999899699
Q gi|254780150|r 308 YILTASEGGRTTGFMDNYRPQFFMDTADVTGRIILS-----PGSQAVMPGDRVDLEVELIYPIAMEPNQTFSMREGGKTV 382 (392)
Q Consensus 308 ~il~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~-----~~~~~i~~g~~~~v~l~l~~pi~~e~~~rfilRd~~~ti 382 (392)
T Consensus 320 ~iL~~~~~~~~~pi~~g~~~~lh~~t~~~~~~I~~l~~~~~~~~~~l~~Gd~a~v~~~l~~Pi~ie~g~RfilRd~g~Ti 399 (409)
T CHL00071 320 YILTKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFTADDGSKAEMVMPGDRIKMTVELIYPIAIEKGMRFAIREGGRTV 399 (409)
T ss_pred EEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCEECCCCEEEEEEEECCCEEECCCCEEEEEECCEEE
T ss_conf 99867667765531589758999985499999999603577786173689989999998940887659989999899889
Q ss_pred EEEEEEEEEC
Q ss_conf 9899955319
Q gi|254780150|r 383 GAGLILEIIE 392 (392)
Q Consensus 383 g~G~I~~v~e 392 (392)
T Consensus 400 g~G~V~~v~~ 409 (409)
T CHL00071 400 GAGVVSKIIK 409 (409)
T ss_pred EEEEEEEEEC
T ss_conf 9999999869