HHsearch alignment for GI: 254780150 and conserved domain: COG0486
>COG0486 ThdF Predicted GTPase [General function prediction only].
Probab=99.36 E-value=6.4e-12 Score=92.99 Aligned_cols=154 Identities=23% Similarity=0.221 Sum_probs=102.7
Q ss_pred CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCC---CHHHHH
Q ss_conf 88279999904689887899999987644420013126868698629206378999821990899984787---302467
Q gi|254780150|r 10 KESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPG---HADYVK 86 (392)
Q Consensus 10 k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PG---H~~f~~ 86 (392)
T Consensus 215 r~G~kvvIiG~PNvGKSSLLNaL~~~d~AI-----VTd------I~GTTRDviee~i~i~G~pv~l~DTAGiRet~d~VE 283 (454)
T COG0486 215 REGLKVVIIGRPNVGKSSLLNALLGRDRAI-----VTD------IAGTTRDVIEEDINLNGIPVRLVDTAGIRETDDVVE 283 (454)
T ss_pred HCCCEEEEECCCCCCHHHHHHHHHCCCCEE-----ECC------CCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCHHH
T ss_conf 458649998799886799999886678667-----428------999741037899998988999985677666734899
Q ss_pred H--H---HHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEE
Q ss_conf 7--9---8774002331452012344332106778888631876023310023335612221101232100111014532
Q gi|254780150|r 87 N--M---ITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSD 161 (392)
Q Consensus 87 ~--m---i~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~ 161 (392)
T Consensus 284 ~iGIeRs~~~i~~ADlvL~v~D~~~~~~~~d~~~~~-~~~~~-~~~i~v~NK~DL~~~~~----~-~~~-------~~~~ 349 (454)
T COG0486 284 RIGIERAKKAIEEADLVLFVLDASQPLDKEDLALIE-LLPKK-KPIIVVLNKADLVSKIE----L-ESE-------KLAN 349 (454)
T ss_pred HHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHH-HCCCC-CCEEEEEECHHCCCCCC----C-CHH-------HCCC
T ss_conf 999999999998599899997088777601177887-24368-97799996021156432----1-012-------0267
Q ss_pred EEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 2102331146764114445652123320344310252
Q gi|254780150|r 162 DTPIIRGSALCALQGTNKELGEDSIHALMKAVDTHIP 198 (392)
Q Consensus 162 ~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~~ 198 (392)
T Consensus 350 ~~~~i~iSa~t~----------~Gl~~L~~~i~~~~~ 376 (454)
T COG0486 350 GDAIISISAKTG----------EGLDALREAIKQLFG 376 (454)
T ss_pred CCCEEEEEECCC----------CCHHHHHHHHHHHHH
T ss_conf 882699982576----------579999999999986