HHsearch alignment for GI: 254780150 and conserved domain: PRK00741
>PRK00741 prfC peptide chain release factor 3; Provisional.
Probab=100.00 E-value=0 Score=348.64 Aligned_cols=265 Identities=26% Similarity=0.362 Sum_probs=193.7
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHH------HH----HHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHH
Q ss_conf 999990468988789999998764------44----20013126868698629206378999821990899984787302
Q gi|254780150|r 14 GLSTIGHVDHGKTTLTAAITKYYS------EE----KKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHAD 83 (392)
Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~------~~----~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~ 83 (392)
T Consensus 12 niaIi~H~dAGKTTLtE~lL~~~GaI~~~G~V~~~~~~~~~~sD~~~~E~~RgiSI~ssv~~~e~~~~~iNliDTPGh~D 91 (526)
T PRK00741 12 TFAIISHPDAGKTTLTEKLLLFGGAIQEAGTVKGRKSGRHATSDWMEMEKQRGISVTSSVMQFPYRDCLINLLDTPGHED 91 (526)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCEEECCEEEEEECCEEEEEEECCCCHH
T ss_conf 79999378989899999999746752448466314678864678858899759648615177867898999990989467
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCC--CHHHHHHCCCCCCE---------
Q ss_conf 4677987740023314520123443321067788886318760233100233356--12221101232100---------
Q gi|254780150|r 84 YVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVD--DDELLDISEYEIRD--------- 152 (392)
Q Consensus 84 f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~--~~~~~~~i~~~i~~--------- 152 (392)
T Consensus 92 F~~e~~raL~a~D~Av~Vida~~GVe~qTe~~w~~~~~~~iP-~i~FINKmDR~~ad~~~~l~ei~~~lg~~~~p~~~Pi 170 (526)
T PRK00741 92 FSEDTYRTLTAVDSALMVIDAAKGVEPQTRKLMEVCRLRDTP-IFTFINKLDRDGREPLELLDEIEEVLGIACAPITWPI 170 (526)
T ss_pred HHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 789999999873759999977755233368999998863998-8999965676789878988778887478736888303
Q ss_pred -----------EEEEE--EEE-------------------------------------------------------EEEE
Q ss_conf -----------11101--453-------------------------------------------------------2210
Q gi|254780150|r 153 -----------LLKEH--KYS-------------------------------------------------------DDTP 164 (392)
Q Consensus 153 -----------~l~~~--~~~-------------------------------------------------------~~~p 164 (392)
T Consensus 171 g~g~~F~GvvDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~el~~~~~~~~d~~~~~~G~l~P 250 (526)
T PRK00741 171 GMGKRFKGVYDLYNDEVELYQPGHGHTIQEFEIIKGLDNPELDEALGEDLAEQLREELELVQGASNEFDLEAFLAGELTP 250 (526)
T ss_pred CCCCCEEEEEEECCCEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEE
T ss_conf 67886037888013879980367788404660587787789998753899997553577773155510689997398028
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCC---------CCCCCCCEECCCCC--CC-CCCCCCEEEEEEEC
Q ss_conf 23311467641144456521233203443102522221---------00001100000001--35-54454301487424
Q gi|254780150|r 165 IIRGSALCALQGTNKELGEDSIHALMKAVDTHIPTPQR---------SLDAPFLMHIEGSC--GI-EGRGTVVTGCIKRG 232 (392)
Q Consensus 165 ii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~~~p~~---------~~~~p~r~~I~~vf--~i-~g~G~Vv~GrV~sG 232 (392)
T Consensus 251 Vf~GSA~~----------n~GV~~LLd~iv~~~PsP~~r~~~~~~v~p~~~~fsa~VFKiqanmDP~h~griaf~RV~SG 320 (526)
T PRK00741 251 VFFGSALN----------NFGVQEFLDAFVEWAPAPQPRQTDERVVEPTEEKFSGFVFKIQANMDPKHRDRIAFMRVCSG 320 (526)
T ss_pred EEEEECCC----------CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEE
T ss_conf 99620003----------65699999999997799877777765447877774359999984037542543799997511
Q ss_pred CCCCCCEEEEEECCCCCCCEEEECCCC----CCCCCCCCCCCHHHHHHHCCCCCCEEECHHEEECCCC
Q ss_conf 534896799950687432125412100----1211443210013666411245432202117732677
Q gi|254780150|r 233 RIKAGSDVEIIGMGGKKLKVKCTDVEM----FRKKLDEAIAGDNVGLLLRGVNRADVPRGRVVCAPGS 296 (392)
Q Consensus 233 ~l~~Gd~i~i~p~~~~~~~~kv~si~~----~~~~v~~a~aGd~v~l~Lkgi~~~di~rGdvl~~~~~ 296 (392)
T Consensus 321 ~l~~g~~v~n~r~gk---~eri~~l~~~~g~~r~~V~ea~AGDIvgl~----~~~~~~tGDTL~~~~~ 381 (526)
T PRK00741 321 KFEKGMKVRHVRTGK---DVRISNALTFMAQDREHVEEAYAGDIIGLH----NHGTIQIGDTFTEGEK 381 (526)
T ss_pred EECCCCEEEECCCCC---EEEHHHHHHHHCCCCEEEEEECCCCEEEEC----CCCCCCCCCEECCCCC
T ss_conf 885799898525795---366326778744352351387699899971----6663003755206885