HHsearch alignment for GI: 254780150 and conserved domain: PRK04004

>PRK04004 translation initiation factor IF-2; Validated.
Probab=100.00  E-value=7.4e-42  Score=278.59  Aligned_cols=223  Identities=25%  Similarity=0.307  Sum_probs=159.3

Q ss_pred             CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCC-E-----------------E
Q ss_conf             827999990468988789999998764442001312686869862920637899982199-0-----------------8
Q gi|254780150|r   11 ESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDK-R-----------------F   72 (392)
Q Consensus        11 ~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~-~-----------------~   72 (392)
T Consensus         5 ~PI-vtimGHVDhGKTsLLD~iR~t-~V~~~E-----------aGGITQhIGA~~v~~~~~~~~~~~~~~~~~~~~~ipg   71 (592)
T PRK04004          5 QPI-VVVLGHVDHGKTTLLDKIRGT-AVAAKE-----------AGGITQHIGATEVPIDVIEKIAGPLVKRLPLKLKIPG   71 (592)
T ss_pred             CCE-EEEECCCCCCHHHHHHHHHCC-CCCCCC-----------CCCCCCEECEEEECCCCHHHHCCCCCCCCCCCCCCCC
T ss_conf             988-999787377763689998628-773555-----------7762323065984123101103443344332345677


Q ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCC-CHH----H-----
Q ss_conf             999847873024677987740023314520123443321067788886318760233100233356-122----2-----
Q gi|254780150|r   73 YSHIDCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVD-DDE----L-----  142 (392)
Q Consensus        73 i~iiD~PGH~~f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~-~~~----~-----  142 (392)
T Consensus        72 llfiDTPGHeaFt~mR~RGa~vtDiaILVVa~~dGv~pQT~EaI~~~k~~~vP-~IVAiNKiDr~~gw~~~~~~~~~~~~  150 (592)
T PRK04004         72 LLFIDTPGHEAFSNLRKRGGALADIAILVVDINEGFQPQTIESLNILKSRKTP-FVVAANKIDRIPGWKSVEGAPFLESF  150 (592)
T ss_pred             CEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCCCCHHHHH
T ss_conf             55765996599999997367457889999977888676279999999975998-89998622356667767674112322


Q ss_pred             ---HHHCCCCC----CE---EEEEE-----------EEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCC----
Q ss_conf             ---11012321----00---11101-----------4532210233114676411444565212332034431025----
Q gi|254780150|r  143 ---LDISEYEI----RD---LLKEH-----------KYSDDTPIIRGSALCALQGTNKELGEDSIHALMKAVDTHI----  197 (392)
Q Consensus       143 ---~~~i~~~i----~~---~l~~~-----------~~~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~----  197 (392)
T Consensus       151 ~~q~~~v~~~l~~~~~~vi~~l~e~G~~~e~~~~~~d~g~~v~~VpvSA~tGe----------Gi~dLL~~i~~Laq~~l  220 (592)
T PRK04004        151 KKQSERVQAELEEKLYELIGELYELGFSADRFDRVSDFTKTVAIVPVSAKTGE----------GIPDLLMVLAGLAQRYL  220 (592)
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCC----------CHHHHHHHHHHHHHHHH
T ss_conf             31738899999888888889998728763221454345881489978205689----------98999999999999999


Q ss_pred             C-CCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCC
Q ss_conf             2-222100001100000001355445430148742453489679995068743212541210
Q gi|254780150|r  198 P-TPQRSLDAPFLMHIEGSCGIEGRGTVVTGCIKRGRIKAGSDVEIIGMGGKKLKVKCTDVE  258 (392)
Q Consensus       198 ~-~p~~~~~~p~r~~I~~vf~i~g~G~Vv~GrV~sG~l~~Gd~i~i~p~~~~~~~~kv~si~  258 (392)
T Consensus       221 ~~~Lka~~~~~a~GtViEsk~dkG~G~vatVIv~~GtLk~GD~IV~g~~~G-pi~tkVRALl  281 (592)
T PRK04004        221 EEELKIEVEGPGKGTVLEVKEERGLGTTLDVILYDGTLRKGDTIVVGGLDG-PIVTKVRALL  281 (592)
T ss_pred             HHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCEECCCCEEEEEECCC-CCCCCHHHHH
T ss_conf             985367999986189999986079886179999768471699999951578-6200047660