HHsearch alignment for GI: 254780150 and conserved domain: PRK04004
>PRK04004 translation initiation factor IF-2; Validated.
Probab=100.00 E-value=7.4e-42 Score=278.59 Aligned_cols=223 Identities=25% Similarity=0.307 Sum_probs=159.3
Q ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCC-E-----------------E
Q ss_conf 827999990468988789999998764442001312686869862920637899982199-0-----------------8
Q gi|254780150|r 11 ESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDK-R-----------------F 72 (392)
Q Consensus 11 ~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~-~-----------------~ 72 (392)
T Consensus 5 ~PI-vtimGHVDhGKTsLLD~iR~t-~V~~~E-----------aGGITQhIGA~~v~~~~~~~~~~~~~~~~~~~~~ipg 71 (592)
T PRK04004 5 QPI-VVVLGHVDHGKTTLLDKIRGT-AVAAKE-----------AGGITQHIGATEVPIDVIEKIAGPLVKRLPLKLKIPG 71 (592)
T ss_pred CCE-EEEECCCCCCHHHHHHHHHCC-CCCCCC-----------CCCCCCEECEEEECCCCHHHHCCCCCCCCCCCCCCCC
T ss_conf 988-999787377763689998628-773555-----------7762323065984123101103443344332345677
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCC-CHH----H-----
Q ss_conf 999847873024677987740023314520123443321067788886318760233100233356-122----2-----
Q gi|254780150|r 73 YSHIDCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVD-DDE----L----- 142 (392)
Q Consensus 73 i~iiD~PGH~~f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~-~~~----~----- 142 (392)
T Consensus 72 llfiDTPGHeaFt~mR~RGa~vtDiaILVVa~~dGv~pQT~EaI~~~k~~~vP-~IVAiNKiDr~~gw~~~~~~~~~~~~ 150 (592)
T PRK04004 72 LLFIDTPGHEAFSNLRKRGGALADIAILVVDINEGFQPQTIESLNILKSRKTP-FVVAANKIDRIPGWKSVEGAPFLESF 150 (592)
T ss_pred CEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCCCCHHHHH
T ss_conf 55765996599999997367457889999977888676279999999975998-89998622356667767674112322
Q ss_pred ---HHHCCCCC----CE---EEEEE-----------EEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCC----
Q ss_conf ---11012321----00---11101-----------4532210233114676411444565212332034431025----
Q gi|254780150|r 143 ---LDISEYEI----RD---LLKEH-----------KYSDDTPIIRGSALCALQGTNKELGEDSIHALMKAVDTHI---- 197 (392)
Q Consensus 143 ---~~~i~~~i----~~---~l~~~-----------~~~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~---- 197 (392)
T Consensus 151 ~~q~~~v~~~l~~~~~~vi~~l~e~G~~~e~~~~~~d~g~~v~~VpvSA~tGe----------Gi~dLL~~i~~Laq~~l 220 (592)
T PRK04004 151 KKQSERVQAELEEKLYELIGELYELGFSADRFDRVSDFTKTVAIVPVSAKTGE----------GIPDLLMVLAGLAQRYL 220 (592)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCC----------CHHHHHHHHHHHHHHHH
T ss_conf 31738899999888888889998728763221454345881489978205689----------98999999999999999
Q ss_pred C-CCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCC
Q ss_conf 2-222100001100000001355445430148742453489679995068743212541210
Q gi|254780150|r 198 P-TPQRSLDAPFLMHIEGSCGIEGRGTVVTGCIKRGRIKAGSDVEIIGMGGKKLKVKCTDVE 258 (392)
Q Consensus 198 ~-~p~~~~~~p~r~~I~~vf~i~g~G~Vv~GrV~sG~l~~Gd~i~i~p~~~~~~~~kv~si~ 258 (392)
T Consensus 221 ~~~Lka~~~~~a~GtViEsk~dkG~G~vatVIv~~GtLk~GD~IV~g~~~G-pi~tkVRALl 281 (592)
T PRK04004 221 EEELKIEVEGPGKGTVLEVKEERGLGTTLDVILYDGTLRKGDTIVVGGLDG-PIVTKVRALL 281 (592)
T ss_pred HHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCEECCCCEEEEEECCC-CCCCCHHHHH
T ss_conf 985367999986189999986079886179999768471699999951578-6200047660