HHsearch alignment for GI: 254780150 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=99.73 E-value=2.2e-17 Score=126.83 Aligned_cols=154 Identities=26% Similarity=0.315 Sum_probs=119.0
Q ss_pred CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCH-----
Q ss_conf 038827999990468988789999998764442001312686869862920637899982199089998478730-----
Q gi|254780150|r 8 RNKESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHA----- 82 (392)
Q Consensus 8 ~~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~----- 82 (392)
T Consensus 168 ~~~~~iriaivGrPNvGKSTl~N~ll~~~r~------ivs~-----~~GtTrD~i~~~~~~~~~~~~~iDTaGirkk~k~ 236 (429)
T TIGR03594 168 EEDGPIKIAIIGRPNVGKSTLVNALLGEERV------IVSD-----IAGTTRDSIDIPFERNGKKYLLIDTAGIRRKGKV 236 (429)
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHH------HCCC-----CCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCC
T ss_conf 4556526999748876546777776543332------1479-----9986310268799999908999989887636642
Q ss_pred -----HH-HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEE
Q ss_conf -----24-677987740023314520123443321067788886318760233100233356122211012321001110
Q gi|254780150|r 83 -----DY-VKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKE 156 (392)
Q Consensus 83 -----~f-~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~ 156 (392)
T Consensus 237 ~~~~e~~s~~~t~~~i~~~dvvil~iD~~~~~~~qD~~i~~~i~~~~k~-~ii~~NK~Dli~~~~~~~~~~~~i~~~l~~ 315 (429)
T TIGR03594 237 TEGIEKYSVLRTLKAIERADVVLLVLDATEGITEQDLRIAGLALEAGKA-LIIVVNKWDLVKDEKTREEFKKELRRKLPF 315 (429)
T ss_pred CHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEEHHHCCCCHHHHHHHHHHHHHHCCC
T ss_conf 3047799999999998744779999976658848889999989873997-699997223037999999999999985623
Q ss_pred EEEEEEEECCCCEEEEEEEC
Q ss_conf 14532210233114676411
Q gi|254780150|r 157 HKYSDDTPIIRGSALCALQG 176 (392)
Q Consensus 157 ~~~~~~~pii~~sa~~g~~~ 176 (392)
T Consensus 316 ~---~~~pI~fiSA~~g~gi 332 (429)
T TIGR03594 316 L---DFAPIVFISALTGQGV 332 (429)
T ss_pred C---CCCCEEEEECCCCCCH
T ss_conf 6---8986899734577899