HHsearch alignment for GI: 254780150 and conserved domain: cd00882

>cd00882 Ras_like_GTPase Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulate initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Memb
Probab=99.11  E-value=1.4e-10  Score=84.69  Aligned_cols=139  Identities=20%  Similarity=0.155  Sum_probs=82.2

Q ss_pred             EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEEC--CCEEEEEEECCCCHHHHHHHHHHHHC
Q ss_conf             9904689887899999987644420013126868698629206378999821--99089998478730246779877400
Q gi|254780150|r   17 TIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYET--DKRFYSHIDCPGHADYVKNMITGATQ   94 (392)
Q Consensus        17 ~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~--~~~~i~iiD~PGH~~f~~~mi~g~~~   94 (392)
T Consensus         1 vvG~~~~GKSsl~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~~~~~~~~~~   68 (157)
T cd00882           1 VVGDSGVGKTSLLNRLLGGEFV------------PEEYETTIIDFYSKTIEVDGKKVKLQIWDTAGQERFRSLRRLYYRG   68 (157)
T ss_pred             CCCCCCCCHHHHHHHHHCCCCC------------CCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf             9294996889999999719888------------7646871578999999999999999999858951156789999753


Q ss_pred             CCCEEEEECCCCCCCCCHHHHH--HHHHH---CCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEECCCCE
Q ss_conf             2331452012344332106778--88863---187602331002333561222110123210011101453221023311
Q gi|254780150|r   95 ADGAILVCAAEDGPKPQTREHI--LLARQ---IGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTPIIRGS  169 (392)
Q Consensus        95 ~D~ailvVda~~G~~~QT~eh~--~l~~~---lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~pii~~s  169 (392)
T Consensus        69 ~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~-iiiv~nK~Dl~~~~~~~~~~--~~~~-~~~---~~~~~~~~~S  141 (157)
T cd00882          69 ADGIILVYDVTDRESFENVKEWLLLILINKEGENIP-IILVGNKIDLPEERVVSEEE--LAEQ-LAK---ELGVPYFETS  141 (157)
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEEEECCCCHHCCCCCHHH--HHHH-HHH---HCCCEEEEEC
T ss_conf             579999986588888999999999999975258984-99998535615406688999--9999-998---7898699984


Q ss_pred             EEEEE
Q ss_conf             46764
Q gi|254780150|r  170 ALCAL  174 (392)
Q Consensus       170 a~~g~  174 (392)
T Consensus       142 a~~~~  146 (157)
T cd00882         142 AKTGE  146 (157)
T ss_pred             CCCCC
T ss_conf             78883