HHsearch alignment for GI: 254780150 and conserved domain: cd00882
>cd00882 Ras_like_GTPase Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulate initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Memb
Probab=99.11 E-value=1.4e-10 Score=84.69 Aligned_cols=139 Identities=20% Similarity=0.155 Sum_probs=82.2
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEEC--CCEEEEEEECCCCHHHHHHHHHHHHC
Q ss_conf 9904689887899999987644420013126868698629206378999821--99089998478730246779877400
Q gi|254780150|r 17 TIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYET--DKRFYSHIDCPGHADYVKNMITGATQ 94 (392)
Q Consensus 17 ~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~--~~~~i~iiD~PGH~~f~~~mi~g~~~ 94 (392)
T Consensus 1 vvG~~~~GKSsl~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~~~~~~~~~~ 68 (157)
T cd00882 1 VVGDSGVGKTSLLNRLLGGEFV------------PEEYETTIIDFYSKTIEVDGKKVKLQIWDTAGQERFRSLRRLYYRG 68 (157)
T ss_pred CCCCCCCCHHHHHHHHHCCCCC------------CCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 9294996889999999719888------------7646871578999999999999999999858951156789999753
Q ss_pred CCCEEEEECCCCCCCCCHHHHH--HHHHH---CCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEECCCCE
Q ss_conf 2331452012344332106778--88863---187602331002333561222110123210011101453221023311
Q gi|254780150|r 95 ADGAILVCAAEDGPKPQTREHI--LLARQ---IGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTPIIRGS 169 (392)
Q Consensus 95 ~D~ailvVda~~G~~~QT~eh~--~l~~~---lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~pii~~s 169 (392)
T Consensus 69 ~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~-iiiv~nK~Dl~~~~~~~~~~--~~~~-~~~---~~~~~~~~~S 141 (157)
T cd00882 69 ADGIILVYDVTDRESFENVKEWLLLILINKEGENIP-IILVGNKIDLPEERVVSEEE--LAEQ-LAK---ELGVPYFETS 141 (157)
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEEEECCCCHHCCCCCHHH--HHHH-HHH---HCCCEEEEEC
T ss_conf 579999986588888999999999999975258984-99998535615406688999--9999-998---7898699984
Q ss_pred EEEEE
Q ss_conf 46764
Q gi|254780150|r 170 ALCAL 174 (392)
Q Consensus 170 a~~g~ 174 (392)
T Consensus 142 a~~~~ 146 (157)
T cd00882 142 AKTGE 146 (157)
T ss_pred CCCCC
T ss_conf 78883