HHsearch alignment for GI: 254780150 and conserved domain: cd01881

>cd01881 Obg_like The Obg-like subfamily consists of five well-delimited, ancient subfamilies, namely Obg, DRG, YyaF/YchF, Ygr210, and NOG1. Four of these groups (Obg, DRG, YyaF/YchF, and Ygr210) are characterized by a distinct glycine-rich motif immediately following the Walker B motif (G3 box). Obg/CgtA is an essential gene that is involved in the initiation of sporulation and DNA replication in the bacteria Caulobacter and Bacillus, but its exact molecular role is unknown. Furthermore, several OBG family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. Nog1 is a nucleolar protein that might function in ribosome assembly. The DRG and Nog1 subfamilies are ubiquitous in archaea and eukaryotes, the Ygr210 subfamily is present in archaea and fungi, and the Obg and YyaF/YchF subfamilies are ubiquitous in bacteria and eukaryotes. The Obg/Nog1 and DRG subfamilies appear to
Probab=99.49  E-value=1.1e-13  Score=104.01  Aligned_cols=149  Identities=19%  Similarity=0.185  Sum_probs=89.6

Q ss_pred             EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECC-CEEEEEEECCC-----CHH--HHHHH
Q ss_conf             99046898878999999876444200131268686986292063789998219-90899984787-----302--46779
Q gi|254780150|r   17 TIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETD-KRFYSHIDCPG-----HAD--YVKNM   88 (392)
Q Consensus        17 ~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~-~~~i~iiD~PG-----H~~--f~~~m   88 (392)
T Consensus         1 ivG~PNvGKSTL~N~Lt~~~~~v-------~~-----~pgTTr~~~~g~~~~~~~~~i~~~DtpGi~~~~~~~~~~~~~~   68 (176)
T cd01881           1 LVGLPNVGKSTLLNALTNAKPKV-------AN-----YPFTTLEPNLGVVEVPDGARIQVADIPGLIEGASEGRGLGNQF   68 (176)
T ss_pred             CCCCCCCCHHHHHHHHHCCCCEE-------EC-----CCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHH
T ss_conf             96999888999999996899603-------07-----8996761246799947996699995787545733787899999


Q ss_pred             HHHHHCCCCEEEEECCCCCCCCCHHHH----------HHH-------HHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCC
Q ss_conf             877400233145201234433210677----------888-------863187602331002333561222110123210
Q gi|254780150|r   89 ITGATQADGAILVCAAEDGPKPQTREH----------ILL-------ARQIGISSIVVYMNKVDAVDDDELLDISEYEIR  151 (392)
Q Consensus        89 i~g~~~~D~ailvVda~~G~~~QT~eh----------~~l-------~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~  151 (392)
T Consensus        69 l~~~~~~d~il~vvD~~~~~~~~~~~~~~~~~~i~~el~~~~~~~~~~~~~~kp-~i~v~NK~Dl~~~~~~~~~~~~---  144 (176)
T cd01881          69 LAHIRRADAILHVVDASEDDDIGGVDPLEDYEILNAELKLYDLETILGLLTAKP-VIYVLNKIDLDDAEELEEELVR---  144 (176)
T ss_pred             HHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCC-EEEEEECEECCCHHHHHHHHHH---
T ss_conf             987410889999998987655454458999999999999711566555432697-1999968603470031599999---


Q ss_pred             EEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHC
Q ss_conf             01110145322102331146764114445652123320344310
Q gi|254780150|r  152 DLLKEHKYSDDTPIIRGSALCALQGTNKELGEDSIHALMKAVDT  195 (392)
Q Consensus       152 ~~l~~~~~~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~  195 (392)
T Consensus       145 -~~~~---~~~~~ii~iSA~~~~----------gi~~L~~~i~~  174 (176)
T cd01881         145 -ELAL---EEGAEVVPISAKTEE----------GLDELIRAIYE  174 (176)
T ss_pred             -HHHH---CCCCCEEEEECCCCC----------CHHHHHHHHHH
T ss_conf             -9974---689958999777887----------99999999996