>cd01897 NOG NOG1 is a nucleolar GTP-binding protein present in eukaryotes ranging from trypanosomes to humans. NOG1 is functionally linked to ribosome biogenesis and found in association with the nuclear pore complexes and identified in many preribosomal complexes. Thus, defects in NOG1 can lead to defects in 60S biogenesis. The S. cerevisiae NOG1 gene is essential for cell viability, and mutations in the predicted G motifs abrogate function. It is a member of the ODN family of GTP-binding proteins that also includes the bacterial Obg and DRG proteins.

Probab=99.58 E-value=1.4e-14 Score=109.40 Aligned_cols=150 Identities=17% Similarity=0.180 Sum_probs=93.0 Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHH----HH---- Q ss_conf 9999904689887899999987644420013126868698629206378999821990899984787302----46---- Q gi|254780150|r 14 GLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHAD----YV---- 85 (392) Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~----f~---- 85 (392) T Consensus 2 ~VaivG~pNvGKStL~N~L~g~~~~v------~~------~p~TTr~~~~~~~~~~~~~~~liDTpGi~~~~~~~~~~ie 69 (168) T cd01897 2 TLVIAGYPNVGKSSLVNKLTRAKPEV------AP------YPFTTKSLFVGHFDYKYLRWQVIDTPGLLDRPLEERNTIE 69 (168) T ss_pred EEEEECCCCCCHHHHHHHHHCCCCEE------CC------CCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHH T ss_conf 79998899988999999995898602------37------5872357436899983727687248865567478888999 Q ss_pred HHHHHHHH-CCCCEEEEECCCCCCCCCHHHHHHHHH---H--CCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEE Q ss_conf 77987740-023314520123443321067788886---3--18760233100233356122211012321001110145 Q gi|254780150|r 86 KNMITGAT-QADGAILVCAAEDGPKPQTREHILLAR---Q--IGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKY 159 (392) Q Consensus 86 ~~mi~g~~-~~D~ailvVda~~G~~~QT~eh~~l~~---~--lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~ 159 (392) T Consensus 70 ~~~~~~l~~~~d~il~viD~~~~~~~~~~~~~~l~~~i~~~~~~~-p~i~v~NK~Dl~~~~~~~~~-----~~~~~~--- 140 (168) T cd01897 70 MQAITALAHLRAAVLFLFDPSETCGYSLEEQLSLFEEIKPLFKNK-PVIVVLNKIDLLTFEDLSEI-----EEEEEL--- 140 (168) T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC-CEEEEEECCCCCCCCCHHHH-----HHHHHC--- T ss_conf 999999983577689999688767848999999999877652588-87999947534581007999-----999970--- Q ss_pred EEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHC Q ss_conf 322102331146764114445652123320344310 Q gi|254780150|r 160 SDDTPIIRGSALCALQGTNKELGEDSIHALMKAVDT 195 (392) Q Consensus 160 ~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~ 195 (392) T Consensus 141 -~~~~vi~ISA~~g~----------Gi~~L~~~i~e 165 (168) T cd01897 141 -EGEEVLKISTLTEE----------GVDEVKNKACE 165 (168) T ss_pred -CCCCEEEEECCCCC----------CHHHHHHHHHH T ss_conf -89988999815896----------99999999999

HHsearch alignment for GI: 254780150 and conserved domain: cd01897