HHsearch alignment for GI: 254780150 and conserved domain: cd01898
>cd01898 Obg Obg subfamily. The Obg nucleotide binding protein subfamily has been implicated in stress response, chromosome partitioning, replication initiation, mycelium development, and sporulation. Obg proteins are among a large group of GTP binding proteins conserved from bacteria to humans. The E. coli homolog, ObgE is believed to function in ribosomal biogenesis. Members of the subfamily contain two equally and highly conserved domains, a C-terminal GTP binding domain and an N-terminal glycine-rich domain.
Probab=99.60 E-value=2.7e-15 Score=113.89 Aligned_cols=152 Identities=21% Similarity=0.279 Sum_probs=91.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEEC-CCEEEEEEECCC-----CHHH--H
Q ss_conf 9999904689887899999987644420013126868698629206378999821-990899984787-----3024--6
Q gi|254780150|r 14 GLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYET-DKRFYSHIDCPG-----HADY--V 85 (392)
Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~-~~~~i~iiD~PG-----H~~f--~ 85 (392)
T Consensus 2 ~VAiiG~pNvGKSTLlN~l~~~~~~V~------~------~pgTT~~~~~g~i~~~~~~~i~~~DtpGi~~~~~~~~~l~ 69 (170)
T cd01898 2 DVGLVGLPNAGKSTLLSAISNAKPKIA------D------YPFTTLVPNLGVVRVDDGRSFVVADIPGLIEGASEGKGLG 69 (170)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCCEEE------C------CCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCHH
T ss_conf 589989999989999999967876032------5------6665237447799936985699964886444554662248
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCC--CHHHHHHHHHH-----CCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEE
Q ss_conf 7798774002331452012344332--10677888863-----1876023310023335612221101232100111014
Q gi|254780150|r 86 KNMITGATQADGAILVCAAEDGPKP--QTREHILLARQ-----IGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHK 158 (392)
Q Consensus 86 ~~mi~g~~~~D~ailvVda~~G~~~--QT~eh~~l~~~-----lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~ 158 (392)
T Consensus 70 ~~~l~~i~~advil~vvD~~~~~~~~~~~~~i~~~l~~~~~~~~~-kp~ilv~NK~Dl~~~~~~~~~~~----~~~~~~- 143 (170)
T cd01898 70 HRFLRHIERTRLLLHVIDLSGDDDPVEDYKTIRNELELYNPELLE-KPRIVVLNKIDLLDEEELFELLK----ELLKEL- 143 (170)
T ss_pred HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHC-CCCEEEEEHHHCCCHHHHHHHHH----HHHHHC-
T ss_conf 999861334561799998998789899999999999982744403-86506776202428356389999----999856-
Q ss_pred EEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHC
Q ss_conf 5322102331146764114445652123320344310
Q gi|254780150|r 159 YSDDTPIIRGSALCALQGTNKELGEDSIHALMKAVDT 195 (392)
Q Consensus 159 ~~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~ 195 (392)
T Consensus 144 --~~~~vi~iSA~~g~----------gi~~L~~~I~~ 168 (170)
T cd01898 144 --WGKPVFPISALTGE----------GLDELLRKLAE 168 (170)
T ss_pred --CCCCEEEEECCCCC----------CHHHHHHHHHH
T ss_conf --99958999754797----------99999999996