HHsearch alignment for GI: 254780150 and conserved domain: cd03695
>cd03695 CysN_NodQ_II CysN_NodQ_II: This subfamily represents the domain II of the large subunit of ATP sulfurylase (ATPS): CysN or the N-terminal portion of NodQ, found mainly in proteobacteria and homologous to the domain II of EF-Tu. Escherichia coli ATPS consists of CysN and a smaller subunit CysD and CysN. ATPS produces adenosine-5'-phosphosulfate (APS) from ATP and sulfate, coupled with GTP hydrolysis. In the subsequent reaction APS is phosphorylated by an APS kinase (CysC), to produce 3'-phosphoadenosine-5'-phosphosulfate (PAPS) for use in amino acid (aa) biosynthesis. The Rhizobiaceae group (alpha-proteobacteria) appears to carry out the same chemistry for the sufation of a nodulation factor. In Rhizobium meliloti, a the hererodimeric complex comprised of NodP and NodQ appears to possess both ATPS and APS kinase activities. The N and C termini of NodQ correspond to CysN and CysC, respectively. Other eubacteria, Archaea, and eukaryotes use a different ATP sulfurylase, which sho
Probab=99.64 E-value=1e-16 Score=122.77 Aligned_cols=81 Identities=31% Similarity=0.459 Sum_probs=74.8
Q ss_pred CCEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEC
Q ss_conf 10000000135544543014874245348967999506874321254121001211443210013666411245432202
Q gi|254780150|r 208 FLMHIEGSCGIEGRGTVVTGCIKRGRIKAGSDVEIIGMGGKKLKVKCTDVEMFRKKLDEAIAGDNVGLLLRGVNRADVPR 287 (392)
Q Consensus 208 ~r~~I~~vf~i~g~G~Vv~GrV~sG~l~~Gd~i~i~p~~~~~~~~kv~si~~~~~~v~~a~aGd~v~l~Lkgi~~~di~r 287 (392)
T Consensus 1 fr~PVQ~V~r~~~~~R~~~G~v~sG~v~~GD~v~i~Psg---~~a~Vk~I~~~~~~~~~A~aG~~v~l~L~--~eidisR 75 (81)
T cd03695 1 FRFPVQYVIRPNADFRGYAGTIASGSIRVGDEVVVLPSG---KTSRVKSIETFDGELDEAGAGESVTLTLE--DEIDVSR 75 (81)
T ss_pred CCCCEEEEEECCCCCCEEEEEEEECCEECCCEEEECCCC---CCEEEEEEEECCCCCCEECCCCEEEEEEC--CCCCCCC
T ss_conf 932518998269984689999933558389999968999---81899899958998248879982899978--7311579
Q ss_pred HHEEEC
Q ss_conf 117732
Q gi|254780150|r 288 GRVVCA 293 (392)
Q Consensus 288 Gdvl~~ 293 (392)
T Consensus 76 Gdvi~s 81 (81)
T cd03695 76 GDVIVA 81 (81)
T ss_pred CCEEEC
T ss_conf 879859