HHsearch alignment for GI: 254780150 and conserved domain: cd04151

>cd04151 Arl1 Arl1 subfamily. Arl1 (Arf-like 1) localizes to the Golgi complex, where it is believed to recruit effector proteins to the trans-Golgi network. Like most members of the Arf family, Arl1 is myristoylated at its N-terminal helix and mutation of the myristoylation site disrupts Golgi targeting. In humans, the Golgi-localized proteins golgin-97 and golgin-245 have been identified as Arl1 effectors. Golgins are large coiled-coil proteins found in the Golgi, and these golgins contain a C-terminal GRIP domain, which is the site of Arl1 binding. Additional Arl1 effectors include the GARP (Golgi-associated retrograde protein)/VFT (Vps53) vesicle-tethering complex and Arfaptin 2. Arl1 is not required for exocytosis, but appears necessary for trafficking from the endosomes to the Golgi. In Drosophila zygotes, mutation of Arl1 is lethal, and in the host-bloodstream form of Trypanosoma brucei, Arl1 is essential for viability.
Probab=99.11  E-value=2.7e-10  Score=82.86  Aligned_cols=139  Identities=17%  Similarity=0.131  Sum_probs=84.4

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHC
Q ss_conf             99990468988789999998764442001312686869862920637899982199089998478730246779877400
Q gi|254780150|r   15 LSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHADYVKNMITGATQ   94 (392)
Q Consensus        15 i~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f~~~mi~g~~~   94 (392)
T Consensus         2 il~lG~~~~GKTsll~~~~~~---------~~~~~------~pTig~~~~~i~~~~~~~~iwD~~G~e~~r~~~~~y~~~   66 (158)
T cd04151           2 ILILGLDNAGKTTILYRLQLG---------EVVTT------IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSN   66 (158)
T ss_pred             EEEECCCCCCHHHHHHHHHCC---------CCCCC------CCCCCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHCCC
T ss_conf             999999999899999999709---------96775------784882469999898899999679862446278874667


Q ss_pred             CCCEEEEECCCCCC-CCCHHHHHHH----HHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCC-EEEEEEEEEEEEECCCC
Q ss_conf             23314520123443-3210677888----863187602331002333561222110123210-01110145322102331
Q gi|254780150|r   95 ADGAILVCAAEDGP-KPQTREHILL----ARQIGISSIVVYMNKVDAVDDDELLDISEYEIR-DLLKEHKYSDDTPIIRG  168 (392)
Q Consensus        95 ~D~ailvVda~~G~-~~QT~eh~~l----~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~-~~l~~~~~~~~~pii~~  168 (392)
T Consensus        67 ~~~ii~VvD~sd~~~~~~~~~~l~~~l~~~~~~~~p-iliv~NK~Dl~~~~~~~~-i~~~l~l~~~~----~~~~~~~~t  140 (158)
T cd04151          67 TDAIIYVVDSTDRDRLGTAKEELHAMLEEEELKGAV-LLVFANKQDMPGALSEAE-ISEKLGLSELK----DRTWSIFKT  140 (158)
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCHHH-HHHHHHHHHHH----CCCCEEEEE
T ss_conf             889999974578789999999999998346536981-999997667765779999-99998598741----699689996


Q ss_pred             EEEEEE
Q ss_conf             146764
Q gi|254780150|r  169 SALCAL  174 (392)
Q Consensus       169 sa~~g~  174 (392)
T Consensus       141 SA~tG~  146 (158)
T cd04151         141 SAIKGE  146 (158)
T ss_pred             ECCCCC
T ss_conf             787893