HHsearch alignment for GI: 254780150 and conserved domain: pfam00071
>pfam00071 Ras Ras family. Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See pfam00009 pfam00025, pfam00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices.
Probab=99.20 E-value=4.4e-11 Score=87.78 Aligned_cols=139 Identities=24% Similarity=0.216 Sum_probs=85.2
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCC--EEEEEEECCCCHHHHHHHHHH
Q ss_conf 999990468988789999998764442001312686869862920637899982199--089998478730246779877
Q gi|254780150|r 14 GLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDK--RFYSHIDCPGHADYVKNMITG 91 (392)
Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~--~~i~iiD~PGH~~f~~~mi~g 91 (392)
T Consensus 1 Ki~vvG~~~vGKTsli~r~~~~------------~f~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~e~~~~~~~~~ 68 (162)
T pfam00071 1 KLVLVGDGGVGKSSLLIRFTQN------------KFPEEYIPTIGVDFYTKTIEVDGKTVKLQIWDTAGQERFRALRPLY 68 (162)
T ss_pred CEEEECCCCCCHHHHHHHHHHC------------CCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCHHHHHHHHHH
T ss_conf 9899997997799999999619------------9998747741355678999999999999999789872046788998
Q ss_pred HHCCCCEEEEECCCCCCCCCHHHHHH----HH-HH--CCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEE
Q ss_conf 40023314520123443321067788----88-63--1876023310023335612221101232100111014532210
Q gi|254780150|r 92 ATQADGAILVCAAEDGPKPQTREHIL----LA-RQ--IGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTP 164 (392)
Q Consensus 92 ~~~~D~ailvVda~~G~~~QT~eh~~----l~-~~--lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~p 164 (392)
T Consensus 69 ~~~ad~~iivfd~~~---~~S~~~i~~~~~~i~~~~~~~~p-iilvgnK~Dl~~~~~---i~~~e~~~~a~~~----~~~ 137 (162)
T pfam00071 69 YRGAQGFLLVYDITS---RDSFENVKKWLEEILRHADDNVP-IVLVGNKCDLEDQRV---VSTEEGEALAKEL----GLP 137 (162)
T ss_pred HCCCCCCEEECCCCC---HHHHHHHHHHHHHHHHHCCCCCE-EEEEEECCCHHHCCC---CCHHHHHHHHHHH----CCE
T ss_conf 625765504234898---89999999999999985798862-889975247465188---9999999999980----997
Q ss_pred CCCCEEEEEEE
Q ss_conf 23311467641
Q gi|254780150|r 165 IIRGSALCALQ 175 (392)
Q Consensus 165 ii~~sa~~g~~ 175 (392)
T Consensus 138 y~e~Sak~g~g 148 (162)
T pfam00071 138 FMETSAKTNEN 148 (162)
T ss_pred EEEECCCCCCC
T ss_conf 99973788829