HHsearch alignment for GI: 254780150 and conserved domain: pfam00448
>pfam00448 SRP54 SRP54-type protein, GTPase domain. This family includes relatives of the G-domain of the SRP54 family of proteins.
Probab=98.11 E-value=4.4e-05 Score=50.58 Aligned_cols=123 Identities=20% Similarity=0.313 Sum_probs=70.8
Q ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC--CCCC---HHHH------HCCCEEEEEEE-------------EE
Q ss_conf 82799999046898878999999876444200131--2686---8698------62920637899-------------98
Q gi|254780150|r 11 ESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGD--IDSA---PEEK------LRGITIATAHV-------------SY 66 (392)
Q Consensus 11 ~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~--~D~~---~~E~------~rGiTi~~~~~-------------~~ 66 (392)
T Consensus 1 P~v-i~lvGptGvGKTTTiaKLAa~~~~~~~~V~lit~Dt~R~gA~eQL~~ya~~l~v~~~~~~~~~d~~~~~~~~l~~~ 79 (196)
T pfam00448 1 PNV-ILLVGLQGSGKTTTIAKLAAYLKKQGKKVLLVAADTFRAAAIEQLKQLAERLGVPVFGSGTGSDPAAVAFDAVEKA 79 (196)
T ss_pred CEE-EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 969-9998999998899999999999977992899975877688999999999863981781487778789999999998
Q ss_pred ECCCEEEEEEECCC--CHH--HHHHH--HHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 21990899984787--302--46779--8774002331452012344332106778888631876023310023335
Q gi|254780150|r 67 ETDKRFYSHIDCPG--HAD--YVKNM--ITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAV 137 (392)
Q Consensus 67 ~~~~~~i~iiD~PG--H~~--f~~~m--i~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v 137 (392)
T Consensus 80 ~~~~~D~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~-~~~~~f~~~~~~~~~I--~TKlDet 153 (196)
T pfam00448 80 KAENYDVVLVDTAGRLQNDKNLMDELKKIKRVIAPDEVLLVLDATTGQNAL-NQAKAFNEAVGITGVI--LTKLDGD 153 (196)
T ss_pred HHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH-HHHHHHHHHCCCCCEE--EEEECCC
T ss_conf 846899999989998747677899999998522873028998567782137-8999876004776268--8840578