HHsearch alignment for GI: 254780150 and conserved domain: pfam05783

>pfam05783 DLIC Dynein light intermediate chain (DLIC). This family consists of several eukaryotic dynein light intermediate chain proteins. The light intermediate chains (LICs) of cytoplasmic dynein consist of multiple isoforms, which undergo post-translational modification to produce a large number of species. DLIC1 is known to be involved in assembly, organisation, and function of centrosomes and mitotic spindles when bound to pericentrin. DLIC2 is a subunit of cytoplasmic dynein 2 that may play a role in maintaining Golgi organisation by binding cytoplasmic dynein 2 to its Golgi-associated cargo.
Probab=97.83  E-value=1.9e-05  Score=52.85  Aligned_cols=141  Identities=26%  Similarity=0.277  Sum_probs=78.0

Q ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHH---HHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEE-CCCCHHHHHHH
Q ss_conf             79999904689887899999987644---420013126868698629206378999821990899984-78730246779
Q gi|254780150|r   13 LGLSTIGHVDHGKTTLTAAITKYYSE---EKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHID-CPGHADYVKNM   88 (392)
Q Consensus        13 ~ni~~iGhvd~GKSTL~~~L~~~~~~---~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD-~PGH~~f~~~m   88 (392)
T Consensus        46 K~ILVLGd~~sGKttLi~kLQg~ed~kkG~gLeY~YldV~DedrDd------------~tRl~VWiLDgd~~~~~LLKfa  113 (490)
T pfam05783        46 KNVLVLGEDGSGKTTLIAKLQGVEHPKKGRGLEYLYLNVHDEDRDD------------QTRCNVWILDGDLYHKGLLKFA  113 (490)
T ss_pred             CEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCC------------CCCEEEEEECCCCCHHHHHCCC
T ss_conf             7289977898755899988527443466875433888512465441------------1002358844870111243157


Q ss_pred             HHHHHCCCC-EEEEECCCCCCC--CCH-------HHHH------------------------------------------
Q ss_conf             877400233-145201234433--210-------6778------------------------------------------
Q gi|254780150|r   89 ITGATQADG-AILVCAAEDGPK--PQT-------REHI------------------------------------------  116 (392)
Q Consensus        89 i~g~~~~D~-ailvVda~~G~~--~QT-------~eh~------------------------------------------  116 (392)
T Consensus       114 Ln~~si~~TlIvI~lDms~PW~im~qL~~Wi~VL~~hi~sL~id~ee~~el~e~l~~~wq~Y~ep~d~~~gs~~~r~~~~  193 (490)
T pfam05783       114 LNAESLADTLVIFVVDMSRPWTIMESLQKWASVLREHIDKLKIPPEEMRELEQRLVKDFQEYVEPGDDLPGSPQRRTPRL  193 (490)
T ss_pred             CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             88545020289999725774789999999999999999874899999999999999999864242335788753357777


Q ss_pred             ---------------HHHHHCCCCCEEEEECCCCCCC-------C-HHHHHHCCCCCCEEEEEEEEEEEEECCCCEE
Q ss_conf             ---------------8886318760233100233356-------1-2221101232100111014532210233114
Q gi|254780150|r  117 ---------------LLARQIGISSIVVYMNKVDAVD-------D-DELLDISEYEIRDLLKEHKYSDDTPIIRGSA  170 (392)
Q Consensus       117 ---------------~l~~~lgi~~iIv~iNKmD~v~-------~-~~~~~~i~~~i~~~l~~~~~~~~~pii~~sa  170 (392)
T Consensus       194 s~~~d~~v~LPLgeg~Lt~NLGiP-IvVV~tKsD~me~LEKe~dy~dEhFDfIqq~LR~fCLqyGA----ALiYTSv  265 (490)
T pfam05783       194 SGSDDDSVLLPLGENVLTHNLGIP-VVVVCTKCDAMSVLEKEHDYRDEHFDFIQSHIRRFCLQYGA----ALIYTSV  265 (490)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCC-EEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC----EEEEEEC
T ss_conf             776666421468987100047987-79999464188887651262067789999999999986196----5788523