HHsearch alignment for GI: 254780150 and conserved domain: pfam08477

>pfam08477 Miro Miro-like protein. Mitochondrial Rho proteins (Miro-1 and Miro-2), are atypical Rho GTPases. They have a unique domain organisation, with tandem GTP-binding domains and two EF hand domains (pfam00036), that may bind calcium. They are also larger than classical small GTPases. It has been proposed that they are involved in mitochondrial homeostasis and apoptosis.
Probab=98.41  E-value=2.8e-06  Score=58.01  Aligned_cols=111  Identities=22%  Similarity=0.271  Sum_probs=69.7

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHC
Q ss_conf             99990468988789999998764442001312686869862920637899982199089998478730246779877400
Q gi|254780150|r   15 LSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHADYVKNMITGATQ   94 (392)
Q Consensus        15 i~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f~~~mi~g~~~   94 (392)
T Consensus         2 ivvvG~~~vGKTSLi~r~~~~~f~~~--------~~~-~~~~~~~~~~~~~~~~~~~~l~i~Dt~g~~~~~~~~~~~~~~   72 (118)
T pfam08477         2 VVVIGDKGSGKSSLLSQLVGGEFPPE--------IPE-EIQGDTLAVDTLEVDGDTELLHIWDFGGREELKFEHIIFMKT   72 (118)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCC--------CCC-CCCCCEEEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHCCC
T ss_conf             99999899789999999983988876--------667-877776888999999928999999899967776666542258


Q ss_pred             CCCEEEEECCCCCCCCCHHHH----HHHHHH--CCCCCEEEEECCCC
Q ss_conf             233145201234433210677----888863--18760233100233
Q gi|254780150|r   95 ADGAILVCAAEDGPKPQTREH----ILLARQ--IGISSIVVYMNKVD  135 (392)
Q Consensus        95 ~D~ailvVda~~G~~~QT~eh----~~l~~~--lgi~~iIv~iNKmD  135 (392)
T Consensus        73 ~d~~ilvydit~~~Sf~~~~~~~~~i~~~~~~~~~~p-iilVGnK~D  118 (118)
T pfam08477        73 ADAILLVYDLTDRESLNRVSRLIAWLPHLRKLGKKIP-VILVGNKFD  118 (118)
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC-EEEEEECCC
T ss_conf             7467899979987899999999999999982099998-899996859