HHsearch alignment for GI: 254780150 and conserved domain: smart00173
>smart00173 RAS Ras subfamily of RAS small GTPases. Similar in fold and function to the bacterial EF-Tu GTPase. p21Ras couples receptor Tyr kinases and G protein receptors to protein kinase cascades
Probab=98.75 E-value=2.7e-08 Score=70.47 Aligned_cols=137 Identities=23% Similarity=0.263 Sum_probs=81.6
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEE-EEEECCC--EEEEEEECCCCHHHHHHHHH
Q ss_conf 99999046898878999999876444200131268686986292063789-9982199--08999847873024677987
Q gi|254780150|r 14 GLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAH-VSYETDK--RFYSHIDCPGHADYVKNMIT 90 (392)
Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~-~~~~~~~--~~i~iiD~PGH~~f~~~mi~ 90 (392)
T Consensus 2 Kiv~vGd~~vGKTsli~r~~~~~------------f~~~y--~~Ti~~~~~k~i~~~~~~~~l~iwDt~G~e~~~~~~~~ 67 (164)
T smart00173 2 KLVVLGSGGVGKSALTIQFVQGH------------FVDDY--DPTIEDSYRKQIEIDGEVCLLDILDTAGQEEFSAMRDQ 67 (164)
T ss_pred EEEEECCCCCCHHHHHHHHHHCC------------CCCCC--CCCEEEEEEEEEEECCEEEEEEEEECCCCCCHHHHHHH
T ss_conf 89999999978999999997297------------99877--88136789999999999999999989997103567777
Q ss_pred HHHCCCCEEEEECCCCCCCCCHHHHH-----HHHHHC---CCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEE
Q ss_conf 74002331452012344332106778-----888631---8760233100233356122211012321001110145322
Q gi|254780150|r 91 GATQADGAILVCAAEDGPKPQTREHI-----LLARQI---GISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDD 162 (392)
Q Consensus 91 g~~~~D~ailvVda~~G~~~QT~eh~-----~l~~~l---gi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~ 162 (392)
T Consensus 68 ~~~~a~~~ilvydi~~---~~Sf~~~~~~~~~i~~~~~~~~~p-iilvgnK~DL~~~r~---V~~~e~~~~a~~~----~ 136 (164)
T smart00173 68 YMRTGEGFLLVYSITD---RQSFEEIKKFREQILRVKDRDDVP-IVLVGNKCDLESERV---VSTEEGKELARQW----G 136 (164)
T ss_pred HCCCCCEEEEEEECCC---HHHHHHHHHHHHHHHHHCCCCCCC-EEEEEECCCCHHCCC---CCHHHHHHHHHHC----C
T ss_conf 5379877999830798---899999999999999861888886-687775346301178---9999999999983----9
Q ss_pred EECCCCEEEEEEE
Q ss_conf 1023311467641
Q gi|254780150|r 163 TPIIRGSALCALQ 175 (392)
Q Consensus 163 ~pii~~sa~~g~~ 175 (392)
T Consensus 137 ~~~~E~SAk~g~n 149 (164)
T smart00173 137 CPFLETSAKERVN 149 (164)
T ss_pred CEEEEECCCCCCC
T ss_conf 9899985898817