HHsearch alignment for GI: 254780150 and conserved domain: smart00178

>smart00178 SAR Sar1p-like members of the Ras-family of small GTPases. Yeast SAR1 is an essential gene required for transport of secretory proteins from the endoplasmic reticulum to the Golgi apparatus.
Probab=98.97  E-value=3.4e-09  Score=76.07  Aligned_cols=146  Identities=14%  Similarity=0.132  Sum_probs=89.1

Q ss_pred             CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHH
Q ss_conf             88279999904689887899999987644420013126868698629206378999821990899984787302467798
Q gi|254780150|r   10 KESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHADYVKNMI   89 (392)
Q Consensus        10 k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f~~~mi   89 (392)
T Consensus        15 ~ke~~ililGLd~aGKTTil~~lk~~---------~~~~------~~PT~g~~~e~~~~~~~~~~~wDlgG~~~~R~lW~   79 (184)
T smart00178       15 NKHAKILFLGLDNAGKTTLLHMLKND---------RLAQ------HQPTQHPTSEELAIGNIKFTTFDLGGHQQARRLWK   79 (184)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCC---------CCCC------CCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHH
T ss_conf             66147999965889889999998069---------9753------05787886489999999999998898777889999


Q ss_pred             HHHHCCCCEEEEECCCCC-CCCCHHHHHHHH----HHCCCCCEEEEECCCCCCC---CHHHHHHCCCCCCEEEEEEEE--
Q ss_conf             774002331452012344-332106778888----6318760233100233356---122211012321001110145--
Q gi|254780150|r   90 TGATQADGAILVCAAEDG-PKPQTREHILLA----RQIGISSIVVYMNKVDAVD---DDELLDISEYEIRDLLKEHKY--  159 (392)
Q Consensus        90 ~g~~~~D~ailvVda~~G-~~~QT~eh~~l~----~~lgi~~iIv~iNKmD~v~---~~~~~~~i~~~i~~~l~~~~~--  159 (392)
T Consensus        80 ~Yy~~~~~iIfVVDssD~~r~~eak~~L~~ll~~~~l~~~P-lLilaNKqDl~~a~~~~ei~~~L--~L~~~~~~~~~~~  156 (184)
T smart00178       80 DYFPEVNGIVYLVDAYDKERFAESKRELDALLSDEELATVP-FLILGNKIDAPYAASEDELRYAL--GLTNTTGSKGKVG  156 (184)
T ss_pred             HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCHHHHHHHH--CCHHHHCCCCCCC
T ss_conf             88216758999972686889999999999986467655970-99999756777899999999881--9512326557667


Q ss_pred             EEEEECCCCEEEEE
Q ss_conf             32210233114676
Q gi|254780150|r  160 SDDTPIIRGSALCA  173 (392)
Q Consensus       160 ~~~~pii~~sa~~g  173 (392)
T Consensus       157 ~r~~~i~~~SA~tG  170 (184)
T smart00178      157 VRPLEVFMCSVVRR  170 (184)
T ss_pred             CCCEEEEEEECCCC
T ss_conf             76319997356079