HHsearch alignment for GI: 254780150 and conserved domain: smart00178
>smart00178 SAR Sar1p-like members of the Ras-family of small GTPases. Yeast SAR1 is an essential gene required for transport of secretory proteins from the endoplasmic reticulum to the Golgi apparatus.
Probab=98.97 E-value=3.4e-09 Score=76.07 Aligned_cols=146 Identities=14% Similarity=0.132 Sum_probs=89.1
Q ss_pred CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHH
Q ss_conf 88279999904689887899999987644420013126868698629206378999821990899984787302467798
Q gi|254780150|r 10 KESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHADYVKNMI 89 (392)
Q Consensus 10 k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f~~~mi 89 (392)
T Consensus 15 ~ke~~ililGLd~aGKTTil~~lk~~---------~~~~------~~PT~g~~~e~~~~~~~~~~~wDlgG~~~~R~lW~ 79 (184)
T smart00178 15 NKHAKILFLGLDNAGKTTLLHMLKND---------RLAQ------HQPTQHPTSEELAIGNIKFTTFDLGGHQQARRLWK 79 (184)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCC---------CCCC------CCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHH
T ss_conf 66147999965889889999998069---------9753------05787886489999999999998898777889999
Q ss_pred HHHHCCCCEEEEECCCCC-CCCCHHHHHHHH----HHCCCCCEEEEECCCCCCC---CHHHHHHCCCCCCEEEEEEEE--
Q ss_conf 774002331452012344-332106778888----6318760233100233356---122211012321001110145--
Q gi|254780150|r 90 TGATQADGAILVCAAEDG-PKPQTREHILLA----RQIGISSIVVYMNKVDAVD---DDELLDISEYEIRDLLKEHKY-- 159 (392)
Q Consensus 90 ~g~~~~D~ailvVda~~G-~~~QT~eh~~l~----~~lgi~~iIv~iNKmD~v~---~~~~~~~i~~~i~~~l~~~~~-- 159 (392)
T Consensus 80 ~Yy~~~~~iIfVVDssD~~r~~eak~~L~~ll~~~~l~~~P-lLilaNKqDl~~a~~~~ei~~~L--~L~~~~~~~~~~~ 156 (184)
T smart00178 80 DYFPEVNGIVYLVDAYDKERFAESKRELDALLSDEELATVP-FLILGNKIDAPYAASEDELRYAL--GLTNTTGSKGKVG 156 (184)
T ss_pred HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCHHHHHHHH--CCHHHHCCCCCCC
T ss_conf 88216758999972686889999999999986467655970-99999756777899999999881--9512326557667
Q ss_pred EEEEECCCCEEEEE
Q ss_conf 32210233114676
Q gi|254780150|r 160 SDDTPIIRGSALCA 173 (392)
Q Consensus 160 ~~~~pii~~sa~~g 173 (392)
T Consensus 157 ~r~~~i~~~SA~tG 170 (184)
T smart00178 157 VRPLEVFMCSVVRR 170 (184)
T ss_pred CCCEEEEEEECCCC
T ss_conf 76319997356079