RPSBLAST alignment for GI: 254780150 and conserved domain: cd01887
>gnl|CDD|133287 cd01887, IF2_eIF5B, IF2/eIF5B (initiation factors 2/ eukaryotic initiation factor 5B) subfamily. IF2/eIF5B contribute to ribosomal subunit joining and function as GTPases that are maximally activated by the presence of both ribosomal subunits. As seen in other GTPases, IF2/IF5B undergoes conformational changes between its GTP- and GDP-bound states. Eukaryotic IF2/eIF5Bs possess three characteristic segments, including a divergent N-terminal region followed by conserved central and C-terminal segments. This core region is conserved among all known eukaryotic and archaeal IF2/eIF5Bs and eubacterial IF2s. Length = 168
Score = 82.2 bits (204), Expect = 2e-16
Identities = 57/166 (34%), Positives = 75/166 (45%), Gaps = 34/166 (20%)
Query: 18 IGHVDHGKTTLTAAITKYYSEEKKEYGDID--------SAPEEKLRGITIATAHVSYETD 69
+GHVDHGKTTL I K + E G I A K+ GIT
Sbjct: 6 MGHVDHGKTTLLDKIRKT-NVAAGEAGGITQHIGAFEVPAEVLKIPGITF---------- 54
Query: 70 KRFYSHIDCPGHADYVKNMIT-GATQADGAILVCAAEDGPKPQTREHILLARQIGISSIV 128
ID PGH + NM GA+ D AILV AA+DG PQT E I LA+ + +
Sbjct: 55 ------IDTPGHEAF-TNMRARGASLTDIAILVVAADDGVMPQTIEAIKLAKAANV-PFI 106
Query: 129 VYMNKVDAVDDDE---LLDISEYEIRDLLKEHKYSDDTPIIRGSAL 171
V +NK+D + + ++SE L E ++ D I+ SA
Sbjct: 107 VALNKIDKPNANPERVKNELSEL---GLQGEDEWGGDVQIVPTSAK 149