RPSBLAST alignment for GI: 254780150 and conserved domain: cd03693
>gnl|CDD|58084 cd03693, EF1_alpha_II, EF1_alpha_II: this family represents the domain II of elongation factor 1-alpha (EF-1a) that is found in archaea and all eukaryotic lineages. EF-1A is very abundant in the cytosol, where it is involved in the GTP-dependent binding of aminoacyl-tRNAs to the A site of the ribosomes in the second step of translation from mRNAs to proteins. Both domain II of EF1A and domain IV of IF2/eIF5B have been implicated in recognition of the 3'-ends of tRNA. More than 61% of eukaryotic elongation factor 1A (eEF-1A) in cells is estimated to be associated with actin cytoskeleton. The binding of eEF1A to actin is a noncanonical function that may link two distinct cellular processes, cytoskeleton organization and gene expression.. Length = 91
Score = 62.8 bits (153), Expect = 2e-10
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 205 DAPFLMHIEGSCGIEGRGTVVTGCIKRGRIKAGSDVEIIGMGGKKLKVKCTDVEMFRKKL 264
D P + I+ I G GTV G ++ G +K G V G +VK VEM + L
Sbjct: 2 DKPLRLPIQDVYKIGGIGTVPVGRVETGVLKPGMVV-TFAPAGVTGEVK--SVEMHHEPL 58
Query: 265 DEAIAGDNVGLLLRGVNRADVPRGRVVCAPG 295
+EA+ GDNVG ++ V++ D+ RG V
Sbjct: 59 EEALPGDNVGFNVKNVSKKDIKRGDVAGDSK 89