HHsearch alignment for GI: 254780151 and conserved domain: COG0037

>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning].
Probab=99.58  E-value=1e-14  Score=125.83  Aligned_cols=163  Identities=23%  Similarity=0.312  Sum_probs=114.7

Q ss_pred             CCEEEEEECCCHHHHHHHHHHHHCC--CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHH
Q ss_conf             3889999609857999999998869--84999998704787665555778818999999999998099589817078866
Q gi|254780151|r   20 DMRVVVAMSGGVDSSVVAALLKRDG--YDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERFR   97 (408)
Q Consensus        20 ~~kV~va~SGGVDSsvaa~lL~~~G--~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f~   97 (408)
T Consensus        21 ~~~ilVavSGGkDS~~ll~~L~~l~~~~~~~a~~Vd~---~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~   91 (298)
T COG0037          21 EYKILVAVSGGKDSLALLHLLKELGRRIEVEAVHVDH---GLRG------YSDQEAELVEKLCEKLGIPLIVERVTDDLG   91 (298)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECC---CCCC------CCHHHHHHHHHHHHHCCCCEEEEEHHHHHH
T ss_conf             7858999378789999999999842257389999708---9886------432899999999996499848862045431


Q ss_pred             HHCCCCCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEE
Q ss_conf             32244112678708861200001541105888887401687645225311025412678773168853157878731898
Q gi|254780151|r   98 NAVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFL  177 (408)
Q Consensus        98 ~~V~~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQSYfL  177 (408)
T Consensus        92 ~~~~~----------~~~~c~~c-~~~R~~~l~~~a~~~g~~~i~tgH~~dD~~et~-----lm~l~~g~~~~-----~l  150 (298)
T COG0037          92 RETLD----------GKSICAAC-RRLRRGLLYKIAKELGADKIATGHHLDDQAETF-----LMNLLRGSGLR-----GL  150 (298)
T ss_pred             HCCCC----------CCCHHHHH-HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH-----HHHHHCCCCHH-----HH
T ss_conf             00246----------76787999-999999999999985999898567846899999-----99986175224-----56


Q ss_pred             EEECCHH----HCEEECCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             6302022----1003342568997898999974125435
Q gi|254780151|r  178 FATTQQQ----LCDLRFPLGDMKKESVRDLAREMGLDIA  212 (408)
Q Consensus       178 ~~l~~~~----L~~~~FPlg~~~K~eVR~~A~~~gl~~a  212 (408)
T Consensus       151 ~~~~~~~~~~~~~~~iRPL~~~~~~ei~~~~~~~~l~~~  189 (298)
T COG0037         151 RGMPPKRPFEGGLLIIRPLLYVREKEIELYAKEKGLPYI  189 (298)
T ss_pred             HCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCEE
T ss_conf             408852445788645475746889999999997599875