HHsearch alignment for GI: 254780151 and conserved domain: COG0037
>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning].
Probab=99.58 E-value=1e-14 Score=125.83 Aligned_cols=163 Identities=23% Similarity=0.312 Sum_probs=114.7
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCC--CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHH
Q ss_conf 3889999609857999999998869--84999998704787665555778818999999999998099589817078866
Q gi|254780151|r 20 DMRVVVAMSGGVDSSVVAALLKRDG--YDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERFR 97 (408)
Q Consensus 20 ~~kV~va~SGGVDSsvaa~lL~~~G--~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f~ 97 (408)
T Consensus 21 ~~~ilVavSGGkDS~~ll~~L~~l~~~~~~~a~~Vd~---~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 91 (298)
T COG0037 21 EYKILVAVSGGKDSLALLHLLKELGRRIEVEAVHVDH---GLRG------YSDQEAELVEKLCEKLGIPLIVERVTDDLG 91 (298)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECC---CCCC------CCHHHHHHHHHHHHHCCCCEEEEEHHHHHH
T ss_conf 7858999378789999999999842257389999708---9886------432899999999996499848862045431
Q ss_pred HHCCCCCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEE
Q ss_conf 32244112678708861200001541105888887401687645225311025412678773168853157878731898
Q gi|254780151|r 98 NAVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFL 177 (408)
Q Consensus 98 ~~V~~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQSYfL 177 (408)
T Consensus 92 ~~~~~----------~~~~c~~c-~~~R~~~l~~~a~~~g~~~i~tgH~~dD~~et~-----lm~l~~g~~~~-----~l 150 (298)
T COG0037 92 RETLD----------GKSICAAC-RRLRRGLLYKIAKELGADKIATGHHLDDQAETF-----LMNLLRGSGLR-----GL 150 (298)
T ss_pred HCCCC----------CCCHHHHH-HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH-----HHHHHCCCCHH-----HH
T ss_conf 00246----------76787999-999999999999985999898567846899999-----99986175224-----56
Q ss_pred EEECCHH----HCEEECCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 6302022----1003342568997898999974125435
Q gi|254780151|r 178 FATTQQQ----LCDLRFPLGDMKKESVRDLAREMGLDIA 212 (408)
Q Consensus 178 ~~l~~~~----L~~~~FPlg~~~K~eVR~~A~~~gl~~a 212 (408)
T Consensus 151 ~~~~~~~~~~~~~~~iRPL~~~~~~ei~~~~~~~~l~~~ 189 (298)
T COG0037 151 RGMPPKRPFEGGLLIIRPLLYVREKEIELYAKEKGLPYI 189 (298)
T ss_pred HCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCEE
T ss_conf 408852445788645475746889999999997599875