HHsearch alignment for GI: 254780151 and conserved domain: KOG2805
>KOG2805 consensus.
Probab=100.00 E-value=0 Score=808.56 Aligned_cols=363 Identities=34% Similarity=0.579 Sum_probs=328.9
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHH
Q ss_conf 86338899996098579999999988698499999870478766555577881899999999999809958981707886
Q gi|254780151|r 17 NPKDMRVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERF 96 (408)
Q Consensus 17 ~~k~~kV~va~SGGVDSsvaa~lL~~~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f 96 (408)
T Consensus 2 p~~~~~VvvamSgGVDSsVaa~Ll~~~g~~v~gv~M~nWd~~--de~~s~cp~e~D~~da~~Vc~~LnI~~~~Vnf~kEY 79 (377)
T KOG2805 2 PEKPDRVVVAMSGGVDSSVAARLLAARGYNVTGVFMKNWDSL--DEFGSQCPAERDWKDAKRVCKQLNIPLHQVNFVKEY 79 (377)
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCC--CCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEHHHH
T ss_conf 866654899953771189999999741887169966220122--235668981120899999998709702787437999
Q ss_pred HHHCCCCCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCC-CCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEE
Q ss_conf 632244112678708861200001541105888887401-6876452253110254126787731688531578787318
Q gi|254780151|r 97 RNAVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQ-LGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSY 175 (408)
Q Consensus 97 ~~~V~~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~-~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQSY 175 (408)
T Consensus 80 W~~Vfs~~L~~Y~~G~TPNPDI~CN~~IKFg~~~~~a~en~~~d~latGHYAr~~~~~~~--~~~~~l~~~~d~~KDQt~ 157 (377)
T KOG2805 80 WNDVFSPFLEEYENGRTPNPDILCNKHIKFGKFFKHAIENLGYDWLATGHYARVVLEDED--NAESHLLISKDMVKDQTY 157 (377)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEEEEEEEEEECCCCC--CCCEEEEECCCCCCCCEE
T ss_conf 999999998887658999997134451421178999987558873774212144037556--762357612566677326
Q ss_pred EEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHCCCEEECCCCC-CHHHHHHCCCCCCCCCCEECCC-CCEE
Q ss_conf 9863020221003342568997898999974125435511102301112775-1034553076643467110377-4322
Q gi|254780151|r 176 FLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLDIADKSDSQDICFVQQGK-YFDVVKRINAGIALEGDIVHLN-GQIL 253 (408)
Q Consensus 176 fL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~~a~K~eSqgICFi~~~~-~~~Fl~~~~~~~~~~G~ivd~~-G~vi 253 (408)
T Consensus 158 FL~~in~~~L~r~lfPlg~~~K~eVk~lA~~~gf~~aeK~eSqGICFvgk~~~F~dFl~~yi~--~~~g~Il~i~~gs~v 235 (377)
T KOG2805 158 FLSTINQTQLKRLLFPLGCLTKSEVKKLAKQAGFPNAEKPESQGICFVGKIKHFSDFLQRYIG--SSPGPILEIDSGSVV 235 (377)
T ss_pred EEECCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCC--CCCCCEEEECCCCCC
T ss_conf 763036999986206676567799999998659864568665026885362347899998547--899871883288622
Q ss_pred EEECCCEEEEECCCCCCCCCC---CCCCEEEECCCCCCEEEEE---CCCCCCCCCEEECCCEECCCCCCCCCCCCCEEEE
Q ss_conf 335783153102334335657---7861376317553125652---3555422211200223037765554456871899
Q gi|254780151|r 254 GRHNGIINYTIGQRRGLGVAM---GEPLFVVYLDKNSSRVIVG---PRESLEVHRIYLREINWLGDGLFEDAVVDGFKCF 327 (408)
Q Consensus 254 G~H~G~~~yTIGQRkGL~i~~---~eP~YVv~id~~~N~ViVg---~~~~L~~~~i~l~d~nWi~~~~~~~~~~~~~~~~ 327 (408)
T Consensus 236 g~h~G~h~~TIGqR~g~sqa~~~~~g~wfV~~k~~~~n~i~i~rg~~~p~l~s~~~~i~~~kw~~~k~~~-i~t~~l~c~ 314 (377)
T KOG2805 236 GNHRGIHSYTIGQRCGISQALSLYGGPWFVSEKDTKNNVIYICRGYNNPDLYSRIFRIGSPKWLGTKPQG-IKTGALRCK 314 (377)
T ss_pred CCCCCEEEEEECHHCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCCHHHHHCEEEECCHHHCCCCCCC-CCCCCEEEE
T ss_conf 3332357787020027202200247964899860678729998587997775024881680221767676-764656899
Q ss_pred EEEECCCCCCEEEEEEECC-EEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCC
Q ss_conf 9980178870089998299-79999759720006963899973888665888768971455530
Q gi|254780151|r 328 VKIRSSQDPVPVFVQRNDD-GVYVDFEKSEVGVASGQACVFYTSDSNEARVLGGGIISGSKRSD 390 (408)
Q Consensus 328 vkiR~~~~pvp~~i~~~~~-~~~V~f~eP~~aiAPGQ~~VfY~~D~~~~~vLGGGiI~~t~~~~ 390 (408)
T Consensus 315 ~R~qh~~p~~~c~~~~~~~~~~~Ihl~~~~RaitpGQ~~~fY~~~----~cLGsG~I~~v~~~~ 374 (377)
T KOG2805 315 VRSQHTPPLYSCKLEMSGDNLAVIHLDAKQRAITPGQFCAFYEDD----TCLGSGVILEVNPDK 374 (377)
T ss_pred EEECCCCCCCCCEEEECCCCCEEEECCCHHCCCCCCCEEEEEECC----EEECCCEEEECCCCC
T ss_conf 971158997341688538973788704301156887279998288----675561465327445