HHsearch alignment for GI: 254780151 and conserved domain: PRK08384
>PRK08384 thiamine biosynthesis protein ThiI; Provisional.
Probab=98.24 E-value=5.3e-06 Score=63.45 Aligned_cols=124 Identities=17% Similarity=0.281 Sum_probs=78.7
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-----CCEEECCHHH
Q ss_conf 38899996098579999999988698499999870478766555577881899999999999809-----9589817078
Q gi|254780151|r 20 DMRVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTIN-----VSHYVFDYEE 94 (408)
Q Consensus 20 ~~kV~va~SGGVDSsvaa~lL~~~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~Lg-----I~~~~~d~~~ 94 (408)
T Consensus 179 ~Gk~l~LlSGGi-SPVAa~~mmKRG~~v~~vhf~~--------------~~~~~~kv~~l~~~L~~y~~~~~~~~~~--- 240 (310)
T PRK08384 179 QGKMVGLLSDEL-SAVAIFLMMKRGVEVIPVHIGM--------------GEKNLEKVRKLWNQLKKYSYGSKGRLVV--- 240 (310)
T ss_pred CCCEEEEECCCC-CHHHHHHHHHCCCEEEEEEECC--------------CHHHHHHHHHHHHHHHHHCCCCCEEEEE---
T ss_conf 884899953886-3999999985698799998568--------------8789999999999999867998469999---
Q ss_pred HHHHHCCCCCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCC-CCEEEECCCCCCCEEEEEECCCCCCCC
Q ss_conf 8663224411267870886120000154110588888740168764522531-102541267877316885315787873
Q gi|254780151|r 95 RFRNAVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHY-IRSRLYVGDDGKRRRIMCRPMDLERDQ 173 (408)
Q Consensus 95 ~f~~~V~~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHY-ar~~~~~~~~~~~~~~L~r~~D~~KDQ 173 (408)
T Consensus 241 ------~~----------------------~~~~a~~ia~~~~~~alvTGEsLGQVASQTl~n---l~~i~~~~~~---- 285 (310)
T PRK08384 241 ------VK----------------------NFERVNKIIRDFGAKGVVKGLRPEQLASETLEN---IYEDSRMFDV---- 285 (310)
T ss_pred ------EC----------------------HHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH---HHHHHHCCCC----
T ss_conf ------66----------------------599999999985998999774125545457988---9999730488----
Q ss_pred EEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCC
Q ss_conf 189863020221003342568997898999974125
Q gi|254780151|r 174 SYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGL 209 (408)
Q Consensus 174 SYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl 209 (408)
T Consensus 286 -------------PVlRPLIg~DK~EII~~Ar~IGT 308 (310)
T PRK08384 286 -------------PVYYPLIALPDEYIEKVKEKIGT 308 (310)
T ss_pred -------------CCCCCCCCCCHHHHHHHHHHCCC
T ss_conf -------------73038568998999999986388