HHsearch alignment for GI: 254780151 and conserved domain: TIGR00268
>TIGR00268 TIGR00268 conserved hypothetical protein TIGR00268; InterPro: IPR005232 This family of conserved hypothetical proteins has no known function but is predicted to be part of the wider PP-loop superfamily ..
Probab=99.78 E-value=1.3e-18 Score=153.69 Aligned_cols=167 Identities=25% Similarity=0.427 Sum_probs=129.4
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHH-CCCEEEEEEEECCCCCCCCCCCCCCCCH-HHHHHHHHHHHHCCCCEEECCHHHH
Q ss_conf 6338899996098579999999988-6984999998704787665555778818-9999999999980995898170788
Q gi|254780151|r 18 PKDMRVVVAMSGGVDSSVVAALLKR-DGYDVIGVTLQLYNSRKASKRKGSCCAG-QDVYDARRVCDTINVSHYVFDYEER 95 (408)
Q Consensus 18 ~k~~kV~va~SGGVDSsvaa~lL~~-~G~~V~g~~m~~~~~~~~~~~~~~c~~~-~d~~~a~~va~~LgI~~~~~d~~~~ 95 (408)
T Consensus 13 f~nk~~~IAySGGvDS~lla~v~~~v~g~~~lait~~sP-----------~~sp~~el~~A~~~A~~~g~~he~~~~--- 78 (263)
T TIGR00268 13 FKNKKVLIAYSGGVDSSLLAAVCSDVAGTEVLAITVVSP-----------SISPRRELEDAKAIAKEIGVKHELVKI--- 78 (263)
T ss_pred HHCCCEEEEEECCHHHHHHHHHHHHHHHHCEEEEEEECC-----------CCCCHHHHHHHHHHHHHHCCCEEEECC---
T ss_conf 640816999517465899999998753101135787627-----------757354489999999880830121100---
Q ss_pred HHHHCCCCCH-HHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCE
Q ss_conf 6632244112-678708861200001541105888887401687645225311025412678773168853157878731
Q gi|254780151|r 96 FRNAVIVPFA-SSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQS 174 (408)
Q Consensus 96 f~~~V~~~~~-~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQS 174 (408)
T Consensus 79 ------d~~~n~~f~-~N~~~RCY~CK~~~-~~~L~~~a~~~gy~~V~dG----tN~dDL~~--~RPG~~A~~------- 137 (263)
T TIGR00268 79 ------DKMANPNFR-ANVEERCYFCKKKV-LSILVKLAEKRGYDVVVDG----TNADDLED--HRPGLRAVK------- 137 (263)
T ss_pred ------CCCCCCCCC-CCCCCCCHHHHHHH-HHHHHHHHHHCCCCEEEEC----CCCCCCCC--CCCHHHHHH-------
T ss_conf ------123685001-68854441548889-9998999986399579823----46200023--675135676-------
Q ss_pred EEEEEECCHHHCEEECCCCCC--CHHHHHHHHHHCCCCCCCHHHCCCEEECCCCCCHH
Q ss_conf 898630202210033425689--97898999974125435511102301112775103
Q gi|254780151|r 175 YFLFATTQQQLCDLRFPLGDM--KKESVRDLAREMGLDIADKSDSQDICFVQQGKYFD 230 (408)
Q Consensus 175 YfL~~l~~~~L~~~~FPlg~~--~K~eVR~~A~~~gl~~a~K~eSqgICFi~~~~~~~ 230 (408)
T Consensus 138 ---------E~~g~~SP~aef~I~K~eir~ia~~lg~~~~DKP~~--~CL~sR~p~g~ 184 (263)
T TIGR00268 138 ---------ELNGVYSPWAEFGITKKEIREIAKSLGLSFYDKPSE--ACLASRFPFGE 184 (263)
T ss_pred ---------HCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--CHHHCCCCCCC
T ss_conf ---------607886872002568799999999748898888662--10210476875