HHsearch alignment for GI: 254780151 and conserved domain: TIGR00289
>TIGR00289 TIGR00289 conserved hypothetical protein TIGR00289; InterPro: IPR005237 This family of conserved hypothetical proteins has no known function. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs in the family, the much longer protein YLR143W from Saccharomyces cerevisiae (Baker's yeast), and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group..
Probab=97.99 E-value=2.4e-05 Score=58.78 Aligned_cols=97 Identities=16% Similarity=0.184 Sum_probs=64.6
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHC
Q ss_conf 88999960985799999999886984999998704787665555778818999999999998099589817078866322
Q gi|254780151|r 21 MRVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERFRNAV 100 (408)
Q Consensus 21 ~kV~va~SGGVDSsvaa~lL~~~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f~~~V 100 (408)
T Consensus 1 MkvAvLySGGKDS~~ALy~al~eG~eV~~LV~v~seN~eSyMf-----H~pN~Hl~~l~AEavGiPL~kl-----yt~Ge 70 (227)
T TIGR00289 1 MKVAVLYSGGKDSILALYKALEEGFEVKYLVGVISENEESYMF-----HVPNVHLTDLVAEAVGIPLIKL-----YTSGE 70 (227)
T ss_pred CEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEE-----ECHHHHHHHHHHHHCCCCHHHH-----HCCCC
T ss_conf 9068985187136899999986288547851000288986205-----3425789999997617662563-----02786
Q ss_pred CCCCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCC
Q ss_conf 441126787088612000015411058888874016876452253
Q gi|254780151|r 101 IVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGH 145 (408)
Q Consensus 101 ~~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGH 145 (408)
T Consensus 71 eEkEVedLa------------------g~l~~lderGvea~~~Ga 97 (227)
T TIGR00289 71 EEKEVEDLA------------------GQLEELDERGVEAVVIGA 97 (227)
T ss_pred CCCHHHHHH------------------HHHHHHHHCCCCEEEECC
T ss_conf 521176662------------------155445530545478853