HHsearch alignment for GI: 254780151 and conserved domain: cd01712
>cd01712 ThiI ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway. It belongs to the Adenosine Nucleotide Hydrolysis suoerfamily and predicted to bind to Adenosine nucleotide.
Probab=99.98 E-value=2.1e-32 Score=252.39 Aligned_cols=169 Identities=20% Similarity=0.276 Sum_probs=131.4
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC---C--CCEEECCHHHHH
Q ss_conf 89999609857999999998869849999987047876655557788189999999999980---9--958981707886
Q gi|254780151|r 22 RVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTI---N--VSHYVFDYEERF 96 (408)
Q Consensus 22 kV~va~SGGVDSsvaa~lL~~~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~L---g--I~~~~~d~~~~f 96 (408)
T Consensus 1 kvl~L~SGGiDS~VAa~ll~krG~~V~~l~f~~~~~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~- 69 (177)
T cd01712 1 KALALLSGGIDSPVAAWLLMKRGIEVDALHFNSGPF----------TSEKAREKVEDLARKLARYSPGHKLVVIIFTFF- 69 (177)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCC----------CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH-
T ss_conf 989995778169999999998799899999989998----------888999999999999999489962899945389-
Q ss_pred HHHCCCCCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEE
Q ss_conf 63224411267870886120000154110588888740168764522531102541267877316885315787873189
Q gi|254780151|r 97 RNAVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYF 176 (408)
Q Consensus 97 ~~~V~~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQSYf 176 (408)
T Consensus 70 ------~~~~~~~~g~~~npcv~ckr~m-~r~a~~~A~~~ga~~IvTGe~lGQvas-------------------qt~~n 123 (177)
T cd01712 70 ------VQKEIYGYGKEKYRCILCKRMM-YRIAEKLAEELGADAIVTGESLGQVAS-------------------QTLEN 123 (177)
T ss_pred ------HHHHHHHHCCCCCCCEEHHHHH-HHHHHHHHHHCCCCEEEECCCHHHHHH-------------------HHHHH
T ss_conf ------9999997088889863629999-999999999869989986652220447-------------------68999
Q ss_pred EEEECCHHHCEEECCCCCCCHHHHHHHHHHCCC-CCCCHHHCCCEEECCCCC
Q ss_conf 863020221003342568997898999974125-435511102301112775
Q gi|254780151|r 177 LFATTQQQLCDLRFPLGDMKKESVRDLAREMGL-DIADKSDSQDICFVQQGK 227 (408)
Q Consensus 177 L~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl-~~a~K~eSqgICFi~~~~ 227 (408)
T Consensus 124 l~~i~~~~~~~ilRPL~~~dK~EI~~~A~~igt~~~s~~~~~~~~~f~p~~p 175 (177)
T cd01712 124 LLVISSGTDLPILRPLIGFDKEEIIGIARRIGTYDISIRPRECCCLFAPKNP 175 (177)
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCC
T ss_conf 9999874256421488899989999999980967440589544237608999