HHsearch results for GI: 254780151 and protein with PDBid: 1kqp_A

>1kqp_A NAD+ synthase;, NH(3)-dependent NAD(+) synthetase; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=99.68  E-value=2.3e-17  Score=143.28  Aligned_cols=160  Identities=23%  Similarity=0.250  Sum_probs=111.7

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHC--------C-CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE-
Q ss_conf             3388999960985799999999886--------9-84999998704787665555778818999999999998099589-
Q gi|254780151|r   19 KDMRVVVAMSGGVDSSVVAALLKRD--------G-YDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHY-   88 (408)
Q Consensus        19 k~~kV~va~SGGVDSsvaa~lL~~~--------G-~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~-   88 (408)
                      +..+|+|||||||||||+|+|++++        | ..|.++.|-.             .+.++.++|+.+|+.+++.+. 
T Consensus        37 g~~~vVvGlSGGIDSav~A~L~~~a~~~~~~~~g~~~v~~v~mp~-------------~~~~~~~da~~~~~~~~~~~~~  103 (271)
T 1kqp_A           37 GAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPH-------------GTQQDEDDAQLALKFIKPDKSW  103 (271)
T ss_dssp             TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCS-------------SSCTTHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------CCCCCHHHHHHHHHHHCCCCEE
T ss_conf             898199979888889999999999999887606885799984687-------------6765699999999860766516


Q ss_pred             ECCHHHHHHHHCCCCCHHHHHCCCCCCCEECC----CCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEE
Q ss_conf             81707886632244112678708861200001----54110588888740168764522531102541267877316885
Q gi|254780151|r   89 VFDYEERFRNAVIVPFASSYAAGETPLPCVDC----NRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMC  164 (408)
Q Consensus        89 ~~d~~~~f~~~V~~~~~~~y~~G~TPNPc~~C----N~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~  164 (408)
                      .+++.+.     ++.|.+.+.....++++-.|    ..++++..|+..|.+.|+-.++|||..-.  ..|      + ..
T Consensus       104 ~i~I~~~-----~~~~~~~~~~~~~~~~~~~~~~NiqaRiR~~~Ly~~An~~g~lvlgTgNksE~--~~G------y-~T  169 (271)
T 1kqp_A          104 KFDIKST-----VSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEA--VTG------F-FT  169 (271)
T ss_dssp             ECCCHHH-----HHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHH--TTT------C-SC
T ss_pred             EECCHHH-----HHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCCC--EEE------E-EE
T ss_conf             8640888-----86766531121023432144525421445589987664369669838971020--100------1-67


Q ss_pred             ECCCCCCCCEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCCC--CCCHHHCCCEE
Q ss_conf             3157878731898630202210033425689978989999741254--35511102301
Q gi|254780151|r  165 RPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLD--IADKSDSQDIC  221 (408)
Q Consensus       165 r~~D~~KDQSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~--~a~K~eSqgIC  221 (408)
                      ..-|..                .-++|||+++|.|||++|+.+|+|  +-+|+=|-|+.
T Consensus       170 kyGD~~----------------~di~Pi~~L~K~eV~~la~~lgiP~~ii~k~PsaeL~  212 (271)
T 1kqp_A          170 KYGDGG----------------ADLLPLTGLTKRQGRTLLKELGAPERLYLKEPTADLL  212 (271)
T ss_dssp             TTTTTC----------------CSBCTTTTCCHHHHHHHHHHTTCCTHHHHSCCBCCCC
T ss_pred             ECCCCC----------------CCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCHHCC
T ss_conf             758787----------------4513233577899999999839987770589981012