HHsearch results for GI: 254780151 and protein with PDBid: 1ni5_A
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATP, ATPase, PP-type, PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=99.42 E-value=6.5e-13 Score=111.40 Aligned_cols=167 Identities=20% Similarity=0.220 Sum_probs=104.2
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHH-----CCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHH
Q ss_conf 338899996098579999999988-----698499999870478766555577881899999999999809958981707
Q gi|254780151|r 19 KDMRVVVAMSGGVDSSVVAALLKR-----DGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYE 93 (408)
Q Consensus 19 k~~kV~va~SGGVDSsvaa~lL~~-----~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~ 93 (408)
+++||+||+|||+||++.+.+|.+ .|+++..+|+ +++-.. -+.+|.+.+++.|+.+|||+++.++.
T Consensus 12 ~~~~vlva~SGG~DS~~ll~~l~~~~~~~~~~~~~~~h~---~h~~r~------~s~~~~~~v~~~~~~~~i~~~~~~~~ 82 (433)
T 1ni5_A 12 TSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHV---HHGLSA------NADAWVTHCENVCQQWQVPLVVERVQ 82 (433)
T ss_dssp TCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEE---CCSCCS------SHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEE---ECCCCC------CHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 998299998180999999999999897589981999998---298895------57999999999999759978999996
Q ss_pred HHHHHHCCCCCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCC
Q ss_conf 88663224411267870886120000154110588888740168764522531102541267877316885315787873
Q gi|254780151|r 94 ERFRNAVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQ 173 (408)
Q Consensus 94 ~~f~~~V~~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQ 173 (408)
.. . .|.. +=.+-|...+..+ .+...++++|||||.+.=.. + +--..|.||....=
T Consensus 83 ~~------~-------~~~~---~e~~aR~~Ry~~~--~~~~~~~~~i~~aHh~dD~~----E-t~l~~l~rg~~~~g-- 137 (433)
T 1ni5_A 83 LA------Q-------EGLG---IEAQARQARYQAF--ARTLLPGEVLVTAQHLDDQC----E-TFLLALKRGSGPAG-- 137 (433)
T ss_dssp CC------C-------SSST---TTTHHHHHHHHHH--HHTCCTTEEEECCCCHHHHH----H-HHHHHHTTTCCTTG--
T ss_pred CC------C-------CCCC---HHHHHHHHHHHHH--HHHHCCCCEEEEEEECHHHH----H-HHHHHHHCCCCCCC--
T ss_conf 47------8-------8888---7999999999987--86541657032200110389----9-99998725776433--
Q ss_pred EEEEEEECCH---HHCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHCCCEEE
Q ss_conf 1898630202---210033425689978989999741254355111023011
Q gi|254780151|r 174 SYFLFATTQQ---QLCDLRFPLGDMKKESVRDLAREMGLDIADKSDSQDICF 222 (408)
Q Consensus 174 SYfL~~l~~~---~L~~~~FPlg~~~K~eVR~~A~~~gl~~a~K~eSqgICF 222 (408)
|++++.. .-.+++-||=.++|.|+++.|++.+|+--+-+-.++.-|
T Consensus 138 ---l~~~~~~~~~~~~~i~RPlL~~~k~ei~~y~~~~~i~~~eD~SN~d~~y 186 (433)
T 1ni5_A 138 ---LSAMAEVSEFAGTRLIRPLLARTRGELVQWARQYDLRWIEDESNQDDSY 186 (433)
T ss_dssp ---GGCCCSEEEETTEEEECGGGSCCHHHHHHHHHHTTCCCBCCCCGGGTTS
T ss_pred ---CCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHH
T ss_conf ---4343222115785088750018699999998746776203667776113