HHsearch results for GI: 254780151 and protein with PDBid: 1vl2_A
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=99.71 E-value=2.5e-17 Score=143.05 Aligned_cols=166 Identities=23% Similarity=0.269 Sum_probs=119.6
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCEEECCHHHHHHH
Q ss_conf 38899996098579999999988698499999870478766555577881899999999999809-95898170788663
Q gi|254780151|r 20 DMRVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTIN-VSHYVFDYEERFRN 98 (408)
Q Consensus 20 ~~kV~va~SGGVDSsvaa~lL~~~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~Lg-I~~~~~d~~~~f~~ 98 (408)
++||++|+|||+||||++.+|+++||||+++++.++.. +|++++++.|.++| ++++++|++++|++
T Consensus 14 k~KVvlAySGGLDTSv~l~~L~e~g~eVi~~~~d~Gq~-------------ed~~~~~~kA~~~GA~~~~v~D~r~ef~~ 80 (421)
T 1vl2_A 14 KEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK-------------DDFVAIKEKALKTGASKVYVEDLRREFVT 80 (421)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEESSCC-------------CCHHHHHHHHHHHTCSEEEEEECHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCH-------------HHHHHHHHHHHHHCCCEEEEECHHHHHHH
T ss_conf 37099993887489999999987799799999979976-------------77899999999849968999860999999
Q ss_pred HCCCCCHHHHHCCCCCCCEECC-CCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEE
Q ss_conf 2244112678708861200001-541105888887401687645225311025412678773168853157878731898
Q gi|254780151|r 99 AVIVPFASSYAAGETPLPCVDC-NRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFL 177 (408)
Q Consensus 99 ~V~~~~~~~y~~G~TPNPc~~C-N~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQSYfL 177 (408)
+.+.|++.+...-..+.||..+ -|.+--..+.+.|++.|+++||.|...+- + ||--|-
T Consensus 81 ~~i~p~I~ana~ye~~Y~l~tslaRplia~~~v~~A~~~ga~~iaHG~TGkG--------N-------------DQvRFe 139 (421)
T 1vl2_A 81 DYIFTALLGNAMYEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGKG--------N-------------DQVRFE 139 (421)
T ss_dssp HTHHHHHTTTCCBTTTBCCHHHHHHHHHHHHHHHHHHHHTCSEEECCCCTTS--------S-------------HHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCC--------C-------------CCCHHH
T ss_conf 9999999668876786534211115899999999999708748833652477--------7-------------541077
Q ss_pred EEECCHHH-CEEECCCCCCC-------HHHHHHHHHHCCCCCC---CHHHCCC
Q ss_conf 63020221-00334256899-------7898999974125435---5111023
Q gi|254780151|r 178 FATTQQQL-CDLRFPLGDMK-------KESVRDLAREMGLDIA---DKSDSQD 219 (408)
Q Consensus 178 ~~l~~~~L-~~~~FPlg~~~-------K~eVR~~A~~~gl~~a---~K~eSqg 219 (408)
..+..-.- -+++=|..++. .++--+.|++.|+|+. ++|=|.+
T Consensus 140 ~~~~aL~p~~~iiaP~R~~~~~~~~~~R~~~i~ya~~~gI~v~~~~~~pyS~D 192 (421)
T 1vl2_A 140 LTYAALNPNLKVISPWKDPEFLAKFKGRTDLINYAMEKGIPIKVSKKRPYSED 192 (421)
T ss_dssp HHHHHHCTTSEEECGGGCHHHHHHTC--CHHHHHHHHHTCCCCSSCCCSSEEE
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 77987289763158566665654201199999999975999731137886336