HHsearch results for GI: 254780151 and protein with PDBid: 1wxi_A
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=99.69 E-value=8e-17 Score=139.38 Aligned_cols=160 Identities=19% Similarity=0.167 Sum_probs=115.0
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHC-----------CCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 3388999960985799999999886-----------98499999870478766555577881899999999999809958
Q gi|254780151|r 19 KDMRVVVAMSGGVDSSVVAALLKRD-----------GYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSH 87 (408)
Q Consensus 19 k~~kV~va~SGGVDSsvaa~lL~~~-----------G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~ 87 (408)
..++|+|||||||||||+|+|++++ +.++.++.|..+.. ..++|..+| ++..+++.+
T Consensus 39 ~~k~vVlGLSGGVDSaV~A~L~~~Alg~~~v~~~~~~~~~~~v~mP~~~~----------~~~~d~~~a--~~~~~~~~~ 106 (275)
T 1wxi_A 39 FIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQ----------ADEQDCQDA--IAFIQPDRV 106 (275)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSC----------TTHHHHHHH--HHHHCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC----------CCHHHHHHH--HHHHCCCCC
T ss_conf 98859997888788999999999999988763155553189997898676----------425899999--986307655
Q ss_pred EECCHHHHHHHHCCCCCHHH-HHCCCCCCCEECCCCEEEH--HHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEE
Q ss_conf 98170788663224411267-8708861200001541105--88888740168764522531102541267877316885
Q gi|254780151|r 88 YVFDYEERFRNAVIVPFASS-YAAGETPLPCVDCNRTVKF--SDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMC 164 (408)
Q Consensus 88 ~~~d~~~~f~~~V~~~~~~~-y~~G~TPNPc~~CN~~iKF--~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~ 164 (408)
..+++...|.. +.+. ...|.++++...||-..++ ..|+.+|...|.-.++|||..-. ..| + ..
T Consensus 107 ~~i~i~~~~~~-----~~~~~~~~~~~~~~~~~~N~~aR~R~~~ly~~A~~~~~lVlgTgNksE~--~~G------y-~T 172 (275)
T 1wxi_A 107 LTVNIKGAVLA-----SEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEA--ITG------F-FT 172 (275)
T ss_dssp EECCCHHHHHH-----HHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHH--TTT------C-SC
T ss_pred CCCCHHHHHHH-----HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHH--HCC------C-CC
T ss_conf 31570178999-----9987652067666320120257889999999984459878758848777--528------7-13
Q ss_pred ECCCCCCCCEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCCC--CCCHHHCCCE
Q ss_conf 3157878731898630202210033425689978989999741254--3551110230
Q gi|254780151|r 165 RPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLD--IADKSDSQDI 220 (408)
Q Consensus 165 r~~D~~KDQSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~--~a~K~eSqgI 220 (408)
..-|..+| ++|||++.|.|||++|+.+|+| +-+|+=|-|+
T Consensus 173 k~GD~~~d----------------i~Pl~~L~K~eVr~La~~lgiP~~Ii~k~Psa~L 214 (275)
T 1wxi_A 173 KYGDGGTD----------------INPLYRLNKRQGKQLLAALACPEHLYKKAPTADL 214 (275)
T ss_dssp TTTTTCCS----------------BCTTTTCCHHHHHHHHHHTTCCGGGTSCC-----
T ss_pred CCCCCCCC----------------HHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCC
T ss_conf 36776521----------------4557327789999999865999676269999334