HHsearch results for GI: 254780151 and protein with PDBid: 1wxi_A

>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=99.69  E-value=8e-17  Score=139.38  Aligned_cols=160  Identities=19%  Similarity=0.167  Sum_probs=115.0

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHC-----------CCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf             3388999960985799999999886-----------98499999870478766555577881899999999999809958
Q gi|254780151|r   19 KDMRVVVAMSGGVDSSVVAALLKRD-----------GYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSH   87 (408)
Q Consensus        19 k~~kV~va~SGGVDSsvaa~lL~~~-----------G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~   87 (408)
                      ..++|+|||||||||||+|+|++++           +.++.++.|..+..          ..++|..+|  ++..+++.+
T Consensus        39 ~~k~vVlGLSGGVDSaV~A~L~~~Alg~~~v~~~~~~~~~~~v~mP~~~~----------~~~~d~~~a--~~~~~~~~~  106 (275)
T 1wxi_A           39 FIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQ----------ADEQDCQDA--IAFIQPDRV  106 (275)
T ss_dssp             TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSC----------TTHHHHHHH--HHHHCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC----------CCHHHHHHH--HHHHCCCCC
T ss_conf             98859997888788999999999999988763155553189997898676----------425899999--986307655


Q ss_pred             EECCHHHHHHHHCCCCCHHH-HHCCCCCCCEECCCCEEEH--HHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEE
Q ss_conf             98170788663224411267-8708861200001541105--88888740168764522531102541267877316885
Q gi|254780151|r   88 YVFDYEERFRNAVIVPFASS-YAAGETPLPCVDCNRTVKF--SDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMC  164 (408)
Q Consensus        88 ~~~d~~~~f~~~V~~~~~~~-y~~G~TPNPc~~CN~~iKF--~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~  164 (408)
                      ..+++...|..     +.+. ...|.++++...||-..++  ..|+.+|...|.-.++|||..-.  ..|      + ..
T Consensus       107 ~~i~i~~~~~~-----~~~~~~~~~~~~~~~~~~N~~aR~R~~~ly~~A~~~~~lVlgTgNksE~--~~G------y-~T  172 (275)
T 1wxi_A          107 LTVNIKGAVLA-----SEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEA--ITG------F-FT  172 (275)
T ss_dssp             EECCCHHHHHH-----HHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHH--TTT------C-SC
T ss_pred             CCCCHHHHHHH-----HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCHHHH--HCC------C-CC
T ss_conf             31570178999-----9987652067666320120257889999999984459878758848777--528------7-13


Q ss_pred             ECCCCCCCCEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCCC--CCCHHHCCCE
Q ss_conf             3157878731898630202210033425689978989999741254--3551110230
Q gi|254780151|r  165 RPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLD--IADKSDSQDI  220 (408)
Q Consensus       165 r~~D~~KDQSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~--~a~K~eSqgI  220 (408)
                      ..-|..+|                ++|||++.|.|||++|+.+|+|  +-+|+=|-|+
T Consensus       173 k~GD~~~d----------------i~Pl~~L~K~eVr~La~~lgiP~~Ii~k~Psa~L  214 (275)
T 1wxi_A          173 KYGDGGTD----------------INPLYRLNKRQGKQLLAALACPEHLYKKAPTADL  214 (275)
T ss_dssp             TTTTTCCS----------------BCTTTTCCHHHHHHHHHHTTCCGGGTSCC-----
T ss_pred             CCCCCCCC----------------HHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCC
T ss_conf             36776521----------------4557327789999999865999676269999334