HHsearch results for GI: 254780151 and protein with PDBid: 2dpl_A

>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii OT3} PDB: 2z0c_A 3a4i_A
Probab=99.90  E-value=1.7e-24  Score=194.31  Aligned_cols=227  Identities=21%  Similarity=0.208  Sum_probs=149.9

Q ss_pred             CCCCEEEEEECCCHHHHHHHHHHHHC-CCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHH
Q ss_conf             63388999960985799999999886-98499999870478766555577881899999999999809958981707886
Q gi|254780151|r   18 PKDMRVVVAMSGGVDSSVVAALLKRD-GYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERF   96 (408)
Q Consensus        18 ~k~~kV~va~SGGVDSsvaa~lL~~~-G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f   96 (408)
                      .++.||+|||||||||||+|+|++++ |.+|+|++|.+          +..+..++.+.++..++++||+++++|+.+.|
T Consensus        18 vg~~kVvvalSGGVDSsV~A~L~~kAlGd~v~aV~~d~----------g~~r~~E~~~~~~~~~~~~gi~~~~vd~~~~~   87 (308)
T 2dpl_A           18 VGDSKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNT----------GFLRKGEPEFVVKTFRDEFGMNLHYVDAQDRF   87 (308)
T ss_dssp             HTTSCEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEEC----------SCCCTTHHHHHHHHHTTTTCCEEEEEECHHHH
T ss_pred             HCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECC----------CCCCCCHHHHHHHHHHHCCCCCCEEEECHHHH
T ss_conf             48998999904889999999999997388689999478----------87881279999986640258650799678987


Q ss_pred             HHHCCCCCHHHHHCCCCCCC---EECCCCEEEHHHHHHHHCCCCCCEECCCCC-CCEEEECCCCCCCEEEEEECCCCCCC
Q ss_conf             63224411267870886120---000154110588888740168764522531-10254126787731688531578787
Q gi|254780151|r   97 RNAVIVPFASSYAAGETPLP---CVDCNRTVKFSDLLSVTRQLGADVLATGHY-IRSRLYVGDDGKRRRIMCRPMDLERD  172 (408)
Q Consensus        97 ~~~V~~~~~~~y~~G~TPNP---c~~CN~~iKF~~l~~~a~~~g~~~iATGHY-ar~~~~~~~~~~~~~~L~r~~D~~KD  172 (408)
                      ...         .+|. .||   |..|.+ +.+..|.+.|+++|++++||||. .....+       +..+.....    
T Consensus        88 ~~~---------l~gv-~~pe~k~~~~~~-~~~~~l~~~A~~~g~~~l~~Gt~~~D~~E~-------~~gikt~~~----  145 (308)
T 2dpl_A           88 FSA---------LKGV-TDPEEKRKIIGR-VFIEVFEEVAKKIGAEYLIQGTIAPDWIES-------QGKIKSHHN----  145 (308)
T ss_dssp             HHH---------TTTC-CCHHHHHHHHHH-HHHHHHHHHHHHHTCSEEECCCCCC-------------------------
T ss_pred             HHH---------HCCC-CCHHHHHHHHHH-HHHHHHHHHHHHCCCCEECCCCCCCCHHHH-------CCCEEEEEC----
T ss_conf             776---------5288-995897627608-999999999998399585134020425541-------353267615----


Q ss_pred             CEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCCC--CCCHHHCCCEEECCCCCCHHHHH-HCCCCCCCCCC-EECC
Q ss_conf             31898630202210033425689978989999741254--35511102301112775103455-30766434671-1037
Q gi|254780151|r  173 QSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLD--IADKSDSQDICFVQQGKYFDVVK-RINAGIALEGD-IVHL  248 (408)
Q Consensus       173 QSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~--~a~K~eSqgICFi~~~~~~~Fl~-~~~~~~~~~G~-ivd~  248 (408)
                          ...+++....+++.||++++|+|||++|+++|||  +.+|+-|-|...-  -.+...+. +.+.. .+..+ |+..
T Consensus       146 ----~Ggl~~~~~~~~iePL~~L~K~EVR~la~~LGlP~~i~~K~P~pgpgl~--i~~~~~it~e~l~~-v~~a~~i~~~  218 (308)
T 2dpl_A          146 ----VGGLPEKLNLKLIEPLRDLYKDEVRELAKFLGLPEKIYNRMPFPGPGLA--VRVIGEVTPEKIRI-VREANAIVEE  218 (308)
T ss_dssp             -----------CCCEEECTTTTCCHHHHHHHHHHTTCCHHHHTCCCCCTTGGG--GGBSSSCCHHHHHH-HHHHHHHHHH
T ss_pred             ----CCCCCHHHCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHCCCCCCCCCCC--CCCCCCCCHHHHHH-HHHHHHHHHH
T ss_conf             ----7886265354412378874569999999980999899288999850124--54586333888874-7999999999


Q ss_pred             CCCEEEEECCCEEEEECCCCCCCCCCCCCCE--EEEC
Q ss_conf             7432233578315310233433565778613--7631
Q gi|254780151|r  249 NGQILGRHNGIINYTIGQRRGLGVAMGEPLF--VVYL  283 (408)
Q Consensus       249 ~G~viG~H~G~~~yTIGQRkGL~i~~~eP~Y--Vv~i  283 (408)
                      .-+.-|.+..-.+.++.+.|..|+-+..+-|  |+.+
T Consensus       219 ~~~~~~~~~~q~~~~l~~~~~vgv~gd~r~y~~~~~~  255 (308)
T 2dpl_A          219 EVERAGLRPWQAFAVLLGVKTVGVQGDIRAYKETIAV  255 (308)
T ss_dssp             HHHHTTCCCSEEEEEECCCCEEEESSSSEEEEEEEEE
T ss_pred             HHHHCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEE
T ss_conf             9998188731004899676162158995554864899