HHsearch results for GI: 254780151 and protein with PDBid: 2pg3_A
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=99.28 E-value=6.6e-12 Score=104.18 Aligned_cols=163 Identities=18% Similarity=0.098 Sum_probs=107.6
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHH--
Q ss_conf 889999609857999999998869849999987047876655557788189999999999980995898170788663--
Q gi|254780151|r 21 MRVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERFRN-- 98 (408)
Q Consensus 21 ~kV~va~SGGVDSsvaa~lL~~~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f~~-- 98 (408)
+|++|.||||+||+++|++|+++|++|+++|+.. .. ....+.+.++..+..++..++.++....+..
T Consensus 3 kk~VvL~SGGlDS~v~a~~l~~~g~~v~~l~~~y-Gq----------~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDY-GQ----------RHRAEIEVAQELSQKLGAAAHKVLDVGLLNELA 71 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEES-SS----------SCHHHHHHHHHHHHHHTCSEEEEEECTHHHHTS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEEC-CC----------CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
T ss_conf 8699983680899999999997699699999979-98----------329999999986654310121012045554135
Q ss_pred ------HCCCCCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCC
Q ss_conf ------22441126787088612000015411058888874016876452253110254126787731688531578787
Q gi|254780151|r 99 ------AVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERD 172 (408)
Q Consensus 99 ------~V~~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KD 172 (408)
.....+...+....+|+.++.+...+-+.....+|...+++.+++|.... +... + .|..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~a~~~a~~~~~~~~~~G~~~~-------d~~~-~-----~d~~-- 136 (232)
T 2pg3_A 72 TSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCET-------DFSG-Y-----PDCR-- 136 (232)
T ss_dssp HHHHHHTTCCCCC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSC-------SSSC-C-----GGGS--
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCC-------CCCC-C-----CCCC--
T ss_conf 65433444444321100236652353013088789999999983997531244466-------6667-7-----7644--
Q ss_pred CEEE--EEE---ECCHHHCEEECCCCCCCHHHHHHHHHHCCC
Q ss_conf 3189--863---020221003342568997898999974125
Q gi|254780151|r 173 QSYF--LFA---TTQQQLCDLRFPLGDMKKESVRDLAREMGL 209 (408)
Q Consensus 173 QSYf--L~~---l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl 209 (408)
+.|+ +.. +....--++.+|+-.+||.||.+++.+.+.
T Consensus 137 ~~f~~~~~~~~~~~~~~~~~i~~P~~~~tK~Ei~~~~~~~~~ 178 (232)
T 2pg3_A 137 DEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALADYYQQ 178 (232)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEECTTTTCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 869999999998557777269950225888999998543123