HHsearch results for GI: 254780151 and protein with PDBid: 3dpi_A
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei 1710B}
Probab=99.83 E-value=3.1e-21 Score=170.98 Aligned_cols=166 Identities=27% Similarity=0.271 Sum_probs=120.8
Q ss_pred CCCEEEEEECCCHHHHHHHHHHH-------HCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH-HHHHCCCCEEEC
Q ss_conf 33889999609857999999998-------8698499999870478766555577881899999999-999809958981
Q gi|254780151|r 19 KDMRVVVAMSGGVDSSVVAALLK-------RDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARR-VCDTINVSHYVF 90 (408)
Q Consensus 19 k~~kV~va~SGGVDSsvaa~lL~-------~~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~-va~~LgI~~~~~ 90 (408)
..++|+|||||||||||+|+|++ ..|+++.++.|.+. ++++.+..||++ +|+.+|++++++
T Consensus 45 g~k~vVvGlSGGVDSaV~A~L~~~a~g~~~~~g~~~~~v~~~~~-----------~~~~~~~~da~~~~a~~lgi~~~~i 113 (285)
T 3dpi_A 45 GLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLP-----------YGAQHDEADARRALAFVRADETLTV 113 (285)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECC-----------SCC---CHHHHHHHHHHCCSEEEEC
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC-----------CCCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf 99969997888899999999999998873467766379998478-----------7886559999999998538753055
Q ss_pred CHHHHHHHHCCCCCHHHHHCCCCCCCE------ECCCCE--EEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEE
Q ss_conf 707886632244112678708861200------001541--105888887401687645225311025412678773168
Q gi|254780151|r 91 DYEERFRNAVIVPFASSYAAGETPLPC------VDCNRT--VKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRI 162 (408)
Q Consensus 91 d~~~~f~~~V~~~~~~~y~~G~TPNPc------~~CN~~--iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~ 162 (408)
|+.+.| +.++..+..+.++++| +.||-. ++...++..|...|.-.++|||+..... | +
T Consensus 114 ~i~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~Ni~aR~R~~~ly~~A~~~~~lVlgTgNksE~~~--G------y- 179 (285)
T 3dpi_A 114 DVKPAA-----DAMLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGARNGVVIGTDHAAESVM--G------F- 179 (285)
T ss_dssp CCHHHH-----HHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHHHH--H------H-
T ss_pred ECCHHH-----HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEE--E------E-
T ss_conf 120588-----8889998751565788412257861579988878899998754988983798761036--5------3-
Q ss_pred EEECCCCCCCCEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCCC--CCCHHHCCCEEECCC
Q ss_conf 853157878731898630202210033425689978989999741254--355111023011127
Q gi|254780151|r 163 MCRPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLD--IADKSDSQDICFVQQ 225 (408)
Q Consensus 163 L~r~~D~~KDQSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~--~a~K~eSqgICFi~~ 225 (408)
..+.-|... -++|||+++|.|||++|+.+|+| +-+|+-|-|++.+.+
T Consensus 180 ~tk~gD~~~----------------di~PLgdL~K~eVr~lAr~lglP~~Ii~k~Psa~L~~~~~ 228 (285)
T 3dpi_A 180 FTKFGDGGA----------------DVLPLAGLTKRRVRALARMLGADEPLVLKTPTADLETLRP 228 (285)
T ss_dssp HHCCCCCCC----------------SBCTTTTCCHHHHHHHHHHTTCCHHHHTCCCHHHHGGGSC
T ss_pred EEECCCCHH----------------HHHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCC
T ss_conf 465176164----------------7988627899999999998489763327998978777899