HHsearch results for GI: 254780151 and protein with PDBid: 3n05_A
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=99.14 E-value=1.9e-11 Score=100.82 Aligned_cols=148 Identities=24% Similarity=0.250 Sum_probs=98.9
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHC-C-CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHH
Q ss_conf 8863388999960985799999999886-9-8499999870478766555577881899999999999809958981707
Q gi|254780151|r 16 KNPKDMRVVVAMSGGVDSSVVAALLKRD-G-YDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYE 93 (408)
Q Consensus 16 ~~~k~~kV~va~SGGVDSsvaa~lL~~~-G-~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~ 93 (408)
+...-++++||+|||+||+++|+|..++ | -+|+|++|- +...+++...+|+.+|+.|||.++.+++.
T Consensus 322 ~~~g~~~~v~glSGGiDSal~a~la~~alg~~~v~~~~mP-----------~~~ss~~t~~~a~~l~~~lg~~~~~~~i~ 390 (590)
T 3n05_A 322 AKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMP-----------SKYSSDHSKGDAAELARRTGLNFRTVSIE 390 (590)
T ss_dssp HTTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECC-----------CSSCCHHHHHHHHHHHHHHTCEEEECCSH
T ss_pred HHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECC-----------CCCCCCCCHHHHHHHHHHCCCCCCCEECH
T ss_conf 9819986999637993289999999985188651135468-----------66674020999999999719973214317
Q ss_pred HHHHHHCCCCCHHHHHCCCCCCCEECCCC--EEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCC
Q ss_conf 88663224411267870886120000154--1105888887401687645225311025412678773168853157878
Q gi|254780151|r 94 ERFRNAVIVPFASSYAAGETPLPCVDCNR--TVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLER 171 (408)
Q Consensus 94 ~~f~~~V~~~~~~~y~~G~TPNPc~~CN~--~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~K 171 (408)
+.+... +... .+..-..=|- ++.--.|+..|.+.|.=.+.||.-.-.. .| +.-.. -|
T Consensus 391 ~~~~~~-----~~~~----~~~~~~~eN~qar~R~~~l~~~a~~~~~lvl~t~n~sE~a--lG------~~t~~-gd--- 449 (590)
T 3n05_A 391 PMFDAY-----MASL----GLTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSELA--VG------YSTLY-GD--- 449 (590)
T ss_dssp HHHHHH-----HHHH----CCCTHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHHH--HT------CCCSS-CT---
T ss_pred HHHHHH-----HHHC----CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH--HC------CCEEC-CC---
T ss_conf 999999-----8621----3341356777887748999998714693796378674676--37------51113-67---
Q ss_pred CCEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 7318986302022100334256899789899997412
Q gi|254780151|r 172 DQSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMG 208 (408)
Q Consensus 172 DQSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~g 208 (408)
....+-|+|++.|.+|+.+|+.++
T Consensus 450 -------------~~~~~~p~~~l~Kt~v~~l~~~~~ 473 (590)
T 3n05_A 450 -------------SVGAYGPIKDVYKTSIFRLAEWRN 473 (590)
T ss_dssp -------------TSCSBCTTTTSCHHHHHHHHHHHH
T ss_pred -------------CCCCCEECCCCCHHHHHHHHHHHH
T ss_conf -------------763200037853999999999985