BLAST/PSIBLAST alignment of GI: 254780151 and GI: 86359043 at iteration 1
>gi|86359043|ref|YP_470935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Rhizobium etli CFN 42] Length = 408
>gi|123510891|sp|Q2K4M8|MNMA_RHIEC RecName: Full=tRNA-specific 2-thiouridylase mnmA Length = 408
>gi|86283145|gb|ABC92208.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferaseprotein [Rhizobium etli CFN 42] Length = 408
 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 233/396 (58%), Positives = 295/396 (74%), Gaps = 1/396 (0%)

Query: 6   ATRLNSLDLDKNPKDMRVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKG 65
           A  LN+LD DK P++ RVVVAMSGGVDSSVVA LLK+ GYDV+G+TLQLY+   A  R G
Sbjct: 7   APPLNTLDFDKKPEETRVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAG 66

Query: 66  SCCAGQDVYDARRVCDTINVSHYVFDYEERFRNAVIVPFASSYAAGETPLPCVDCNRTVK 125
           SCCAGQD+ DAR VC+T+ + HYV DYE+RFR  VI PFA SY AGETP+PCV CN+TVK
Sbjct: 67  SCCAGQDIDDARHVCETLGIPHYVLDYEKRFRETVINPFAESYVAGETPIPCVSCNQTVK 126

Query: 126 FSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFLFATTQQQL 185
           F+DLL+  ++LGAD LATGHYIRSR     +   RR + RP D +RDQSYFLFATTQ+Q+
Sbjct: 127 FADLLATAKELGADALATGHYIRSRPNPSSEHPGRRALFRPADADRDQSYFLFATTQEQI 186

Query: 186 CDLRFPLGDMKKESVRDLAREMGLDIADKSDSQDICFVQQGKYFDVVKRINAGIALEGDI 245
             LRFPLG + K   R LA EMGL +A K+DSQDICFV QGKY D++ ++    AL G+I
Sbjct: 187 DYLRFPLGGLPKAETRRLAEEMGLVVAKKADSQDICFVPQGKYSDIITKLKPNAALAGEI 246

Query: 246 VHLNGQILGRHNGIINYTIGQRRGLGVAMGEPLFVVYLDKNSSRVIVGPRESLEVHRIYL 305
           VHL+G++LG H GI+++TIGQRRG+G+A GEPL+VVYLD  S RVIVGP+E+LE HR+YL
Sbjct: 247 VHLDGRVLGSHEGILHFTIGQRRGIGIATGEPLYVVYLDARSRRVIVGPKEALETHRVYL 306

Query: 306 REINWLGD-GLFEDAVVDGFKCFVKIRSSQDPVPVFVQRNDDGVYVDFEKSEVGVASGQA 364
           R++NWLGD  L E A  +GF C+ K+RS++ P P  +  +  G YVD    E G+A GQA
Sbjct: 307 RDVNWLGDETLAEAASGEGFACYAKVRSTRAPAPAVLHVDATGTYVDLTIGEAGIAPGQA 366

Query: 365 CVFYTSDSNEARVLGGGIISGSKRSDAVEESLLSVI 400
           C  Y++  ++ARV GGG I  S+R  + E SL +++
Sbjct: 367 CALYSAPGDDARVFGGGFIERSEREPSAEASLKALL 402