PSIBLAST alignment of GI: 254780151 and protein with PDB id: 2hma

>gi|114794425|pdb|2HMA|A Chain A, The Crystal Structure Of Trna (5-Methylaminomethyl-2- Thiouridylate)-Methyltransferase Trmu From Streptococcus Pneumoniae Length = 376
 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 119/365 (32%), Positives = 171/365 (46%), Gaps = 25/365 (6%)

Query: 36  VAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEER 95
            A LLK  GYDVIG+  + ++    +   G C A +D  D   V D I + +Y  ++E+ 
Sbjct: 25  TALLLKEQGYDVIGIFXKNWDD---TDENGVCTATEDYKDVVAVADQIGIPYYSVNFEKE 81

Query: 96  FRNAVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGD 155
           + + V   F + Y AG TP P V CN+ +KF   L     LGAD +ATGHY R       
Sbjct: 82  YWDRVFEYFLAEYRAGRTPNPDVXCNKEIKFKAFLDYAITLGADYVATGHYARV----AR 137

Query: 156 DGKRRRIMCRPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLDIADKS 215
           D        R +D  +DQ+YFL   +Q+QL    FPLG ++K  VR LA E GL  A K 
Sbjct: 138 DEDGTVHXLRGVDNGKDQTYFLSQLSQEQLQKTXFPLGHLEKPEVRRLAEEAGLSTAKKK 197

Query: 216 DSQDICFVQQGKYFDVVKRINAGIALEGDIVHLNGQILGRHNGIINYTIGQRRGLGVAM- 274
           DS  ICF+ +  + + +       A  G    ++G+  G H G+  YTIGQR GLG+   
Sbjct: 198 DSTGICFIGEKNFKNFLSNYLP--AQPGRXXTVDGRDXGEHAGLXYYTIGQRGGLGIGGQ 255

Query: 275 ----GEPLFVVYLDKNSSRVIV---GPRESLEVHRIYLREINWLGDGLFEDAVVDGFKCF 327
                 P FVV  D + + + V      +SL    +   ++++  +   E       +C 
Sbjct: 256 HGGDNAPWFVVGKDLSKNILYVGQGFYHDSLXSTSLEASQVHFTREXPEE----FTLECT 311

Query: 328 VKIRSSQDPVPVFVQRNDDGVYVDFEKSEVGVASGQACVFYTSDSNEARVLGGGIISGSK 387
            K R  Q    V V    +   V F + +  +  GQA VFY  +      LGGG+I  + 
Sbjct: 312 AKFRYRQPDSKVTVHVKGEKTEVIFAEPQRAITPGQAVVFYDGE----ECLGGGLIDNAY 367

Query: 388 RSDAV 392
           R   V
Sbjct: 368 RDGQV 372