PSIBLAST alignment of GI: 254780151 and protein with PDB id: 2hma
>gi|114794425|pdb|2HMA|A Chain A, The Crystal Structure Of Trna (5-Methylaminomethyl-2- Thiouridylate)-Methyltransferase Trmu From Streptococcus Pneumoniae Length = 376
Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 119/365 (32%), Positives = 171/365 (46%), Gaps = 25/365 (6%)
Query: 36 VAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEER 95
A LLK GYDVIG+ + ++ + G C A +D D V D I + +Y ++E+
Sbjct: 25 TALLLKEQGYDVIGIFXKNWDD---TDENGVCTATEDYKDVVAVADQIGIPYYSVNFEKE 81
Query: 96 FRNAVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGD 155
+ + V F + Y AG TP P V CN+ +KF L LGAD +ATGHY R
Sbjct: 82 YWDRVFEYFLAEYRAGRTPNPDVXCNKEIKFKAFLDYAITLGADYVATGHYARV----AR 137
Query: 156 DGKRRRIMCRPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLDIADKS 215
D R +D +DQ+YFL +Q+QL FPLG ++K VR LA E GL A K
Sbjct: 138 DEDGTVHXLRGVDNGKDQTYFLSQLSQEQLQKTXFPLGHLEKPEVRRLAEEAGLSTAKKK 197
Query: 216 DSQDICFVQQGKYFDVVKRINAGIALEGDIVHLNGQILGRHNGIINYTIGQRRGLGVAM- 274
DS ICF+ + + + + A G ++G+ G H G+ YTIGQR GLG+
Sbjct: 198 DSTGICFIGEKNFKNFLSNYLP--AQPGRXXTVDGRDXGEHAGLXYYTIGQRGGLGIGGQ 255
Query: 275 ----GEPLFVVYLDKNSSRVIV---GPRESLEVHRIYLREINWLGDGLFEDAVVDGFKCF 327
P FVV D + + + V +SL + ++++ + E +C
Sbjct: 256 HGGDNAPWFVVGKDLSKNILYVGQGFYHDSLXSTSLEASQVHFTREXPEE----FTLECT 311
Query: 328 VKIRSSQDPVPVFVQRNDDGVYVDFEKSEVGVASGQACVFYTSDSNEARVLGGGIISGSK 387
K R Q V V + V F + + + GQA VFY + LGGG+I +
Sbjct: 312 AKFRYRQPDSKVTVHVKGEKTEVIFAEPQRAITPGQAVVFYDGE----ECLGGGLIDNAY 367
Query: 388 RSDAV 392
R V
Sbjct: 368 RDGQV 372