RPSBLAST alignment of GI: 254780151 and protein with PDBid: 2c5s

>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1 Length = 413

 Score =  116 bits (292), Expect = 8e-27
 Identities = 31/257 (12%), Positives = 63/257 (24%), Gaps = 42/257 (16%)

Query: 22  RVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCD 81
           +V+V +SGG+DS V A L  + G  V  V                  + +       +  
Sbjct: 189 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHS----------PPFTSERAKQKVIDLAQ 238

Query: 82  TINVSHYVFDYEERFRNAVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVL 141
            +                V         +  +        R +       +  +  A  +
Sbjct: 239 ELTKYCKRVTLHLVPFTEVQKTINKEIPSSYSMTVM----RRMMMRITERIAEERNALAI 294

Query: 142 ATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESVR 201
            TG  +                     +       +    +     +  PL  M K  + 
Sbjct: 295 TTGESLG-------------------QVASQTLDSMHTINEVTNYPVIRPLITMDKLEII 335

Query: 202 DLAREMGLDIADKSDSQDICFVQQGKYFDVVKRINAGIALEGDIVHLNGQILGRHNGIIN 261
            +A E+G         +D C V          +       E                +I+
Sbjct: 336 KIAEEIGTYDISIRPYEDCCTVFTPASPATKPKREKANRFEAKY---------DFTPLID 386

Query: 262 YTIGQRRGLGVAMGEPL 278
             +  +  + +   E +
Sbjct: 387 EAVANKETMVLQTVEVV 403