RPSBLAST alignment of GI: 254780151 and protein with PDBid: 3a2k

>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus} Length = 464
 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 12/80 (15%)

Query: 18 PKDMRVVVAMSGGVDSSVVAALL----KRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDV 73
           +   V+V +SGG DS  +  +           VI   +  +  R          + +++
Sbjct: 16 SEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVD-HMFRGRE-------SEEEM 67

Query: 74 YDARRVCDTINVSHYVFDYE 93
             +R C    +       +
Sbjct: 68 EFVKRFCVERRILCETAQID 87