Query         gi|254780152|ref|YP_003064565.1| D-3-phosphoglycerate dehydrogenase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 82
No_of_seqs    110 out of 4711
Neff          6.8 
Searched_HMMs 33803
Date          Mon May 23 02:01:20 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780152.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >2pi1_A D-lactate dehydrogenas  99.8   1E-18   3E-23  124.2   6.8   81    1-81     58-139 (334)
  2 >3ba1_A HPPR, hydroxyphenylpyr  99.3   1E-12 3.1E-17   91.0   4.9   58    1-58     81-142 (150)
  3 >2ekl_A D-3-phosphoglycerate d  99.3 1.2E-12 3.5E-17   90.7   4.6   59    1-59     62-124 (127)
  4 >2cuk_A Glycerate dehydrogenas  99.3 1.4E-12 4.2E-17   90.3   5.0   58    1-58     59-120 (128)
  5 >2dbq_A Glyoxylate reductase;   99.3 1.9E-12 5.7E-17   89.5   5.1   58    1-58     61-122 (142)
  6 >3k5p_A D-3-phosphoglycerate d  99.2 1.2E-11 3.6E-16   85.1   4.9   57    1-57     74-134 (144)
  7 >2j6i_A Formate dehydrogenase;  99.2 7.2E-12 2.1E-16   86.4   3.6   47    1-47     78-124 (168)
  8 >1mx3_A CTBP1, C-terminal bind  99.2 9.7E-12 2.9E-16   85.6   3.2   41    1-41     79-119 (152)
  9 >1sc6_A PGDH, D-3-phosphoglyce  99.2   2E-11 5.8E-16   83.9   4.8   51    1-52     63-113 (133)
 10 >2g76_A 3-PGDH, D-3-phosphogly  99.2 1.1E-11 3.3E-16   85.3   3.2   42    1-42     83-124 (150)
 11 >2o4c_A Erythronate-4-phosphat  99.2 1.4E-11 4.3E-16   84.7   3.6   41    1-41     52-92  (120)
 12 >2nac_A NAD-dependent formate   99.2 1.5E-11 4.6E-16   84.5   3.6   50    1-50    107-157 (203)
 13 >2w2k_A D-mandelate dehydrogen  99.2 1.2E-11 3.5E-16   85.2   3.0   63    1-70     73-137 (153)
 14 >2d0i_A Dehydrogenase; structu  99.2 3.6E-11 1.1E-15   82.5   4.9   58    1-58     58-118 (141)
 15 >1ygy_A PGDH, D-3-phosphoglyce  99.1 2.3E-11 6.9E-16   83.5   3.4   42    1-42     60-101 (137)
 16 >1wwk_A Phosphoglycerate dehyd  99.1 3.4E-11 9.9E-16   82.7   3.4   43    1-43     60-102 (121)
 17 >1qp8_A Formate dehydrogenase;  99.1 2.4E-11 7.1E-16   83.5   2.2   61    1-64     44-104 (120)
 18 >1dxy_A D-2-hydroxyisocaproate  99.1 7.8E-11 2.3E-15   80.6   4.1   48    2-49     61-110 (136)
 19 >3gg9_A D-3-phosphoglycerate d  99.1 5.4E-11 1.6E-15   81.5   3.0   41    1-41     65-109 (157)
 20 >1gdh_A D-glycerate dehydrogen  99.1 6.8E-11   2E-15   81.0   3.3   42    1-42     60-102 (130)
 21 >1j4a_A D-LDH, D-lactate dehyd  99.1 7.8E-11 2.3E-15   80.6   3.0   44    5-48     68-113 (136)
 22 >2gcg_A Glyoxylate reductase/h  99.0 2.3E-10 6.8E-15   78.1   5.2   43    2-44     70-113 (140)
 23 >3evt_A Phosphoglycerate dehyd  99.0 6.2E-11 1.8E-15   81.2   1.9   64    1-74     55-118 (134)
 24 >1xdw_A NAD+-dependent (R)-2-h  99.0 1.7E-10 5.1E-15   78.7   2.0   42    1-42     61-104 (133)
 25 >3hg7_A D-isomer specific 2-hy  98.9 3.4E-10   1E-14   77.1   2.9   42    1-43     61-102 (140)
 26 >1ygy_A PGDH, D-3-phosphoglyce  98.4 3.7E-07 1.1E-11   60.3   4.3   43   39-81      1-43  (185)
 27 >2g76_A 3-PGDH, D-3-phosphogly  98.3 4.3E-07 1.3E-11   60.0   4.3   43   39-81      1-43  (185)
 28 >3k5p_A D-3-phosphoglycerate d  98.3 5.3E-07 1.6E-11   59.5   4.0   43   39-81      1-43  (188)
 29 >1sc6_A PGDH, D-3-phosphoglyce  98.3 4.7E-07 1.4E-11   59.7   3.7   43   39-81      1-43  (188)
 30 >1j4a_A D-LDH, D-lactate dehyd  98.3 6.1E-07 1.8E-11   59.2   3.7   42   40-81      1-42  (197)
 31 >1wwk_A Phosphoglycerate dehyd  98.2   1E-06   3E-11   57.9   3.9   43   39-81      1-43  (186)
 32 >3evt_A Phosphoglycerate dehyd  98.2 8.2E-07 2.4E-11   58.4   3.4   44   38-81      1-44  (190)
 33 >2cuk_A Glycerate dehydrogenas  98.1 4.3E-06 1.3E-10   54.5   4.3   43   39-81      1-46  (183)
 34 >1xdw_A NAD+-dependent (R)-2-h  98.0 3.4E-06   1E-10   55.0   3.6   42   40-81      1-43  (198)
 35 >2j6i_A Formate dehydrogenase;  98.0 3.1E-06 9.1E-11   55.2   3.4   43   39-81      1-45  (196)
 36 >3kbo_A Glyoxylate/hydroxypyru  98.0 3.2E-06 9.3E-11   55.2   3.4   37   39-75      2-38  (185)
 37 >3gvx_A Glycerate dehydrogenas  98.0 3.6E-06 1.1E-10   54.9   3.4   37   38-74      1-37  (181)
 38 >3hg7_A D-isomer specific 2-hy  98.0 4.3E-06 1.3E-10   54.5   3.4   36   39-74      1-36  (184)
 39 >2gcg_A Glyoxylate reductase/h  98.0 6.4E-06 1.9E-10   53.5   4.2   43   39-81      1-46  (190)
 40 >1qp8_A Formate dehydrogenase;  98.0 7.4E-06 2.2E-10   53.2   4.1   37   39-75      1-37  (183)
 41 >2ekl_A D-3-phosphoglycerate d  97.9   8E-06 2.4E-10   53.0   4.0   37   39-75      1-37  (186)
 42 >2d0i_A Dehydrogenase; structu  97.9 6.8E-06   2E-10   53.3   3.6   37   38-74      1-37  (192)
 43 >1dxy_A D-2-hydroxyisocaproate  97.9 5.1E-06 1.5E-10   54.1   2.8   42   40-81      1-43  (197)
 44 >3gg9_A D-3-phosphoglycerate d  97.9 9.5E-06 2.8E-10   52.5   4.1   34   42-75      2-35  (195)
 45 >2nac_A NAD-dependent formate   97.9 7.2E-06 2.1E-10   53.2   3.5   43   39-81      1-45  (190)
 46 >1mx3_A CTBP1, C-terminal bind  97.9 8.3E-06 2.5E-10   52.9   3.4   36   39-74      1-36  (195)
 47 >3gvx_A Glycerate dehydrogenas  97.9 1.3E-05 3.8E-10   51.8   4.3   57    3-62     45-101 (109)
 48 >3ba1_A HPPR, hydroxyphenylpyr  97.9 9.3E-06 2.8E-10   52.6   3.5   43   39-81      1-44  (183)
 49 >1gdh_A D-glycerate dehydrogen  97.9 1.3E-05 3.7E-10   51.9   4.0   43   39-81      1-46  (190)
 50 >2w2k_A D-mandelate dehydrogen  97.8 8.4E-06 2.5E-10   52.8   2.0   36   39-74      1-36  (195)
 51 >2dbq_A Glyoxylate reductase;   97.6 2.7E-05   8E-10   50.0   2.7   34   39-72      1-34  (192)
 52 >2o4c_A Erythronate-4-phosphat  94.6  0.0018 5.4E-08   39.9  -3.0   32   40-71      1-32  (167)
 53 >3kbo_A Glyoxylate/hydroxypyru  93.4   0.043 1.3E-06   32.4   2.2   41    2-43     54-100 (130)
 54 >1pjc_A Protein (L-alanine deh  80.4     0.6 1.8E-05   26.0   1.0   33   42-74      1-33  (192)
 55 >2vhw_A Alanine dehydrogenase;  76.6    0.47 1.4E-05   26.6  -0.5   23   42-64      7-29  (194)
 56 >2eez_A Alanine dehydrogenase;  71.0    0.79 2.4E-05   25.4  -0.5   26   42-67      7-32  (193)
 57 >2uyy_A N-PAC protein; long-ch  59.5     2.4 7.1E-05   22.7   0.2   23   52-74      1-23  (193)
 58 >1vqz_A Lipoate-protein ligase  36.1      13  0.0004   18.6   1.0   19   19-37     14-32  (42)
 59 >1v8b_A Adenosylhomocysteinase  35.2     2.9 8.7E-05   22.2  -2.5   20   54-73      1-20  (168)
 60 >3d64_A Adenosylhomocysteinase  34.0       7 0.00021   20.2  -0.8   20   54-73      1-20  (163)
 61 >3d4o_A Dipicolinate synthase   28.3      12 0.00036   18.8  -0.3   24   35-58      3-26  (144)
 62 >2r7r_A RNA-dependent RNA poly  23.2      60  0.0018   15.0   2.4   52   15-72     47-98  (120)
 63 >3bh1_A UPF0371 protein DIP234  22.3      23 0.00069   17.2   0.2   41    2-42    108-149 (163)

No 1  
>>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} (A:)
Probab=99.76  E-value=1e-18  Score=124.20  Aligned_cols=81  Identities=21%  Similarity=0.414  Sum_probs=73.6

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC-CCEEE
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611-21400
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF-NFMGV   79 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~-~~~G~   79 (82)
                      +|+++|+||+|+++++|+||||+++|+++||.|+|+|++++.+|||++++++|+++|++..+++.++.+.|.+. .+.|.
T Consensus        58 ~l~~~p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~l~R~~~~~~~~~~~~~~~~~~~~~~~  137 (334)
T 2pi1_A           58 LLSKXPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAXILTLVKRLKRIEDRVKKLNFSQDSEILAR  137 (334)
T ss_dssp             HHTTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBC
T ss_pred             HHHCCCCCCEEEECCCCCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99449986199988975784230365338879843898652767888765444101221211113322222222333232


Q ss_pred             EC
Q ss_conf             17
Q gi|254780152|r   80 EA   81 (82)
Q Consensus        80 El   81 (82)
                      +|
T Consensus       138 ~l  139 (334)
T 2pi1_A          138 EL  139 (334)
T ss_dssp             CG
T ss_pred             CC
T ss_conf             01


No 2  
>>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor binding domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* (A:1-118,A:302-333)
Probab=99.34  E-value=1e-12  Score=91.00  Aligned_cols=58  Identities=24%  Similarity=0.397  Sum_probs=51.9

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC----CHHHHHHHHHHHHHHC
Q ss_conf             802388985999816560883336741244136431432435----5289999999999727
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSI----TTAEHAISLMLAIARQ   58 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~----sVAE~~i~l~L~l~R~   58 (82)
                      +|+++|+||+|+++|+||||||+++|+++||+|+|+|+.-+.    +.|+.+++-+.+..++
T Consensus        81 ~L~~~p~LK~I~~~g~G~D~IDl~aa~~~GI~V~N~pg~~~~~~~~~~~~~~~~~~~~~~~~  142 (150)
T 3ba1_A           81 LIDALPKLEIVSSFSVGLDKVDLIKCEEKGVRVTNTPDSGTVETRKVMADLVVGNLEAHFSG  142 (150)
T ss_dssp             HHHHCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCCSTCSHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99608557089971887553255310135521136898185999999999999999999869


No 3  
>>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} (A:1-99,A:286-313)
Probab=99.32  E-value=1.2e-12  Score=90.70  Aligned_cols=59  Identities=31%  Similarity=0.495  Sum_probs=52.9

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC----CHHHHHHHHHHHHHHCH
Q ss_conf             802388985999816560883336741244136431432435----52899999999997277
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSI----TTAEHAISLMLAIARQI   59 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~----sVAE~~i~l~L~l~R~~   59 (82)
                      +|+++|+||+|+++|+||||||+++|+++||+|+|+|+..+.    -|||++---+|..++.+
T Consensus        62 ~L~~~p~LK~I~~~gvGyD~VDi~aa~erGI~V~Ntpg~~~~~~~~~~~~~~~~~~~~~~~~~  124 (127)
T 2ekl_A           62 VIEKGKKLKIIARAGIGLDNIDTEEAEKRNIKVVYAPGAQTKEAQKRVAEMTTQNLLNAMKEL  124 (127)
T ss_dssp             HHHHCTTCCEEEECSSCCTTBCHHHHHHTTCEEECCTTTCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHEECCCCHCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             997386763443046434422211000000101237884789999999999999999998627


No 4  
>>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus HB8} (A:1-96,A:280-311)
Probab=99.32  E-value=1.4e-12  Score=90.27  Aligned_cols=58  Identities=34%  Similarity=0.454  Sum_probs=51.5

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC----CHHHHHHHHHHHHHHC
Q ss_conf             802388985999816560883336741244136431432435----5289999999999727
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSI----TTAEHAISLMLAIARQ   58 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~----sVAE~~i~l~L~l~R~   58 (82)
                      +|+++|+||+|+++|+||||||+++|+++||+|+|+|++-+.    +.||.++.-+++...+
T Consensus        59 ~L~~~p~LKlI~~~g~G~d~IDv~aa~~rGI~V~N~pg~~~~~~~~~~~~~~~~~~~~~~~~  120 (128)
T 2cuk_A           59 VMDRAKGLKVIACYSVGVDHVDLEAARERGIRVTHTPGSAGRTTRERMAEVAVENLLAVLEG  120 (128)
T ss_dssp             HHHHSTTCCEEECSSSCCTTBCHHHHHTTTCEEECCCSTCBHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99732235602110101333333322233321022110383999999999999999999869


No 5  
>>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, structural genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* (A:1-98,A:291-334)
Probab=99.31  E-value=1.9e-12  Score=89.52  Aligned_cols=58  Identities=33%  Similarity=0.500  Sum_probs=51.7

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC----CHHHHHHHHHHHHHHC
Q ss_conf             802388985999816560883336741244136431432435----5289999999999727
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSI----TTAEHAISLMLAIARQ   58 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~----sVAE~~i~l~L~l~R~   58 (82)
                      +|+++|+||+|+++|+||||||+++|+++||.|+|+|++-+.    .+||++.-.++++.++
T Consensus        61 ~L~~~p~LK~I~~~gvG~D~IDl~aa~e~GI~V~N~pg~~~~~~~~~~~~~~~~~~~~~~~~  122 (142)
T 2dbq_A           61 VFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDSASFGAREGXAELVAKNLIAFKRG  122 (142)
T ss_dssp             HHHTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99518568889862344420000000123433445652184999999999999999999869


No 6  
>>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infectious disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} (A:1-111,A:300-332)
Probab=99.21  E-value=1.2e-11  Score=85.10  Aligned_cols=57  Identities=26%  Similarity=0.506  Sum_probs=45.4

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCC----HHHHHHHHHHHHHH
Q ss_conf             8023889859998165608833367412441364314324355----28999999999972
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSIT----TAEHAISLMLAIAR   57 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~s----VAE~~i~l~L~l~R   57 (82)
                      +|+++|+||+|+++|+||||||+++|+++||.|+|+|+.++..    +|-.+-.-+|..++
T Consensus        74 ~L~~~p~LK~I~~~gvG~D~IDl~aa~erGI~V~N~pg~~~~~~~~~~~~~~~~~~~~~~~  134 (144)
T 3k5p_A           74 IFAAANRLIAVGCFSVGTNQVELKAARKRGIPVFNAPFGSTEEAQERIGTEVTRKLVEYSD  134 (144)
T ss_dssp             HHHHCTTCCEEEECSSCCTTBCHHHHHHTTCCEECCSSTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCCCCEEEEECCCCCCCCCCHHHCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             9940999719998885446546122002321001135627899999999999999999981


No 7  
>>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A (A:1-117,A:314-364)
Probab=99.21  E-value=7.2e-12  Score=86.35  Aligned_cols=47  Identities=28%  Similarity=0.390  Sum_probs=42.7

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHH
Q ss_conf             80238898599981656088333674124413643143243552899
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEH   47 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~   47 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++|..+..-.
T Consensus        78 ~L~~ap~LKlI~taGvG~DhVDl~AA~erGI~V~nvpgsn~~~~~~~  124 (168)
T 2j6i_A           78 RIDKAKKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGGTTLDAQ  124 (168)
T ss_dssp             HHHHCTTCCEEEESSSCCTTBCHHHHHHHTCCCEEEECTTGGSHHHH
T ss_pred             HHHCCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCCHCHHHHH
T ss_conf             99518996399990887766589999974992057358993839999


No 8  
>>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepressor, transcription repressor; HET: NAD; 1.95A {Homo sapiens} (A:1-116,A:312-347)
Probab=99.18  E-value=9.7e-12  Score=85.64  Aligned_cols=41  Identities=37%  Similarity=0.494  Sum_probs=38.2

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCC
Q ss_conf             80238898599981656088333674124413643143243
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNS   41 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~   41 (82)
                      +|+++|+||+|+++|+||||||+++|+++||.|+|+|+-.+
T Consensus        79 vL~~~p~LK~I~~~gvG~DnVDl~aa~krGI~V~NtpG~~~  119 (152)
T 1mx3_A           79 DLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAWYS  119 (152)
T ss_dssp             HHTTCSSCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTCC
T ss_pred             HHHCCCCCCEEEECCEECCCCCHHHHHHCCCEEEECCCCCH
T ss_conf             99539985179999873251359989868999996998173


No 9  
>>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} (A:1-100,A:289-321)
Probab=99.18  E-value=2e-11  Score=83.94  Aligned_cols=51  Identities=39%  Similarity=0.661  Sum_probs=42.8

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHH
Q ss_conf             8023889859998165608833367412441364314324355289999999
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLM   52 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~   52 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|+.++. -||-.++.+
T Consensus        63 ~L~~~p~LK~I~~~gvG~D~IDl~aa~erGI~V~N~pg~~~~-~~~~~~~~~  113 (133)
T 1sc6_A           63 VINAAEKLVAIGAFAIGTNQVDLDAAAKRGIPVFNAPFGSTQ-EAQENIGLE  113 (133)
T ss_dssp             HHHHCSSCCEEEECSSCCTTBCHHHHHHTTCCEECCTTCCSH-HHHHHHHHH
T ss_pred             HHHCCCCCEEEEECCCCCCCHHCCCCCCCCEEEEECCCCCCH-HHHHHHHHH
T ss_conf             995089874999947533641003010332014631575789-999999999


No 10 
>>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, serine metabolism; HET: NAD; 1.70A {Homo sapiens} (A:1-120,A:306-335)
Probab=99.17  E-value=1.1e-11  Score=85.28  Aligned_cols=42  Identities=55%  Similarity=0.852  Sum_probs=39.4

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC
Q ss_conf             802388985999816560883336741244136431432435
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSI   42 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~   42 (82)
                      +|+++|+||+|+++|+||||||+++|+++||+|+|+|+.++.
T Consensus        83 ~L~~~p~LK~I~~~gaG~D~IDl~aa~erGI~V~NtpG~~~~  124 (150)
T 2g76_A           83 VINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNASTK  124 (150)
T ss_dssp             HHHHCSSCCEEEESSSSCTTBCHHHHHHHTCEEECCSSTCBH
T ss_pred             HHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEECCCCCCCH
T ss_conf             995071476687502334311011102343157303550829


No 11 
>>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosphate ION, oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} (A:1-90,A:258-287)
Probab=99.17  E-value=1.4e-11  Score=84.69  Aligned_cols=41  Identities=32%  Similarity=0.370  Sum_probs=38.5

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCC
Q ss_conf             80238898599981656088333674124413643143243
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNS   41 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~   41 (82)
                      .|+++|+||+|+++|+|+||||+++|+++||.|+|+|++.+
T Consensus        52 ~l~~ap~LK~I~~~gaG~D~IDl~aakerGI~VtN~pGv~~   92 (120)
T 2o4c_A           52 AALAGSPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCYS   92 (120)
T ss_dssp             HHHTTSCCCEEEECSSCSTTBCHHHHHHHTCEEECCTTTCC
T ss_pred             HHHCCCCCEEEEECCCCCCCCCCHHCCCCCCEEEECCCCCC
T ss_conf             99758998499989804465075100255524997167476


No 12 
>>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} (A:1-144,A:335-393)
Probab=99.17  E-value=1.5e-11  Score=84.53  Aligned_cols=50  Identities=32%  Similarity=0.506  Sum_probs=42.1

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC-CHHHHHHH
Q ss_conf             802388985999816560883336741244136431432435-52899999
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSI-TTAEHAIS   50 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~-sVAE~~i~   50 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|+..+. +-+-++-+
T Consensus       107 ~L~~ap~LKlI~t~GvG~DhIDl~AA~erGI~V~nvPG~~~~~~~~~~~~~  157 (203)
T 2nac_A          107 RIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYGTTLTAQARYAAG  157 (203)
T ss_dssp             HHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTCSHHHHHHHHHH
T ss_pred             HHCCCCCEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHH
T ss_conf             973699806999817635743468885289889989981419999999999


No 13 
>>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B (A:1-111,A:307-348)
Probab=99.17  E-value=1.2e-11  Score=85.17  Aligned_cols=63  Identities=29%  Similarity=0.341  Sum_probs=46.7

Q ss_pred             CHHHCC-CCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCC-HHHHHHHHHHHHHHCHHHHHHHHHCCC
Q ss_conf             802388-9859998165608833367412441364314324355-289999999999727799999998599
Q gi|254780152|r    1 MLSHAK-KMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSIT-TAEHAISLMLAIARQIPVANESTHKGK   70 (82)
Q Consensus         1 il~~~~-~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~s-VAE~~i~l~L~l~R~~~~~~~~~~~g~   70 (82)
                      +|+++| +||+|+++|+||||||+++|+++||.|+|+|+.-+.. --|+--.-|       ...++.+.+|+
T Consensus        73 iL~~lP~~LK~Ia~~gvGyDnIDv~aa~erGI~V~NtPG~~~~~~~~~~~~~~~-------~~~~~~~~~~~  137 (153)
T 2w2k_A           73 LISHLPSSLKVFAAAGAGFDWLDLDALNERGVAFANSRGGVAIETFHEFERLTM-------TNIDRFLLQGK  137 (153)
T ss_dssp             HHTTSCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTCSHHHHHHHHHHHH-------HHHHHHHHTCC
T ss_pred             HHHHCCCCCEEEEECCCCCCCCCHHHHHHCEEEEEECCECCHHHHHHHHHHHHH-------HHHHHHHHCCC
T ss_conf             997241272799999845675068888328588860101184999999999999-------99999997798


No 14 
>>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.95A {Pyrococcus horikoshii OT3} (A:1-94,A:287-333)
Probab=99.15  E-value=3.6e-11  Score=82.47  Aligned_cols=58  Identities=28%  Similarity=0.350  Sum_probs=47.1

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC---CHHHHHHHHHHHHHHC
Q ss_conf             802388985999816560883336741244136431432435---5289999999999727
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSI---TTAEHAISLMLAIARQ   58 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~---sVAE~~i~l~L~l~R~   58 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|+..-.   .+|-.+.--+++..|.
T Consensus        58 ~L~~~p~LK~I~~~gvG~D~IDl~aa~~rGI~V~NtP~~~~~~~~~~~~~~~~~~~~~~~~  118 (141)
T 2d0i_A           58 VLENAERLKVISCHSAGYDNIDLEEATKRGIYVTKVSGLALEAQEDVGFRAVENLLKVLRG  118 (141)
T ss_dssp             HHTTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCTCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf             9942856728865043453332222123342313101084999999999999999999879


No 15 
>>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosynthesis, structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} (A:1-97,A:283-322)
Probab=99.14  E-value=2.3e-11  Score=83.54  Aligned_cols=42  Identities=43%  Similarity=0.736  Sum_probs=39.2

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC
Q ss_conf             802388985999816560883336741244136431432435
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSI   42 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~   42 (82)
                      +|+++|+||+|+++|+||||||+++|+++||.|+|+|+.++.
T Consensus        60 vL~~~p~LK~I~~~gvGyDnIDl~aa~~rGI~V~NtPg~~~~  101 (137)
T 1ygy_A           60 VLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTASTA  101 (137)
T ss_dssp             HHHTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSCBH
T ss_pred             HHHCCCCCCEEEECCCCCCCCCHHHHHHCCCEEEECCCCCCH
T ss_conf             981599971999998333501588898679899988984328


No 16 
>>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii OT3} (A:1-97,A:284-307)
Probab=99.12  E-value=3.4e-11  Score=82.66  Aligned_cols=43  Identities=40%  Similarity=0.718  Sum_probs=40.0

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCC
Q ss_conf             8023889859998165608833367412441364314324355
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSIT   43 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~s   43 (82)
                      +|+++|+||+|+++|+||||||+++|+++||.|+|+|+.++..
T Consensus        60 iL~~~p~LK~I~~~~vG~d~IDl~aa~~rGI~VtN~pg~~~~~  102 (121)
T 1wwk_A           60 VIESAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASTVE  102 (121)
T ss_dssp             HHTTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCGGTCBHH
T ss_pred             HHHHCCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCHHH
T ss_conf             9950887748965034453222111011023323466528299


No 17 
>>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} (A:1-80,A:264-303)
Probab=99.10  E-value=2.4e-11  Score=83.47  Aligned_cols=61  Identities=11%  Similarity=0.048  Sum_probs=48.5

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHH
Q ss_conf             8023889859998165608833367412441364314324355289999999999727799999
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANE   64 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~   64 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++...-|=...+   ....||+..+..
T Consensus        44 ~L~~ap~LKlIa~~gvG~D~IDl~aa~ergI~VtNaP~~~~~~~~~~~~---~~~~~~~~~~~~  104 (120)
T 1qp8_A           44 ELAKXPRLKFIQVVTAGLDHLPWESIPPHVTVAGNAGGYGNERVWRQXV---XEAVRNLITYAT  104 (120)
T ss_dssp             HHHHCTTCCCEEBSSSCCTTSCCTTSCTTSCEECCCSSSSCHHHHHHHH---HHHHHHHHHHHT
T ss_pred             HHHHCCCCEEEEECCCCCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHH---HHHHHHHHHHHC
T ss_conf             9960999809999986536125878867988996798655799999999---999999999983


No 18 
>>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenase, oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} (A:1-100,A:298-333)
Probab=99.08  E-value=7.8e-11  Score=80.64  Aligned_cols=48  Identities=29%  Similarity=0.399  Sum_probs=40.7

Q ss_pred             HHH--CCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHH
Q ss_conf             023--889859998165608833367412441364314324355289999
Q gi|254780152|r    2 LSH--AKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAI   49 (82)
Q Consensus         2 l~~--~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i   49 (82)
                      |++  +|+||+|+++|+|+||||+++|+++||+|+|+|++.-..+|-|.+
T Consensus        61 l~~l~~p~LK~Is~~gvG~DnIDv~aa~erGI~V~NvPg~~~~~~~~~~~  110 (136)
T 1dxy_A           61 FEKMHAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAYYYTETAVHNM  110 (136)
T ss_dssp             HHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSTCSHHHHHHH
T ss_pred             HHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
T ss_conf             97376479879999886445215999997899999899850969999999


No 19 
>>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Ralstonia solanacearum} (A:1-107,A:303-352)
Probab=99.07  E-value=5.4e-11  Score=81.53  Aligned_cols=41  Identities=22%  Similarity=0.408  Sum_probs=37.1

Q ss_pred             CHHHCCCCCEEEECC----CCCCCCCHHHHHCCCCEEEECCCCCC
Q ss_conf             802388985999816----56088333674124413643143243
Q gi|254780152|r    1 MLSHAKKMKVVGRAG----IGTDNVDLVVASRAGIVVMNTPFGNS   41 (82)
Q Consensus         1 il~~~~~Lk~I~~~g----~G~d~ID~~~~~~~gI~v~n~~~~~~   41 (82)
                      +|+++|+||+|+++|    +||||||+++|+++||.|+|+|++-+
T Consensus        65 vl~~~p~LK~I~~~g~~~stG~D~IDi~aA~e~GI~V~NvPgy~~  109 (157)
T 3gg9_A           65 LLDRLPKLKIISQTGRVSRDAGGHIDLEACTDKGVVVLEGKGSYV  109 (157)
T ss_dssp             HHTTCTTCCEEEESSCCCCSSSCSBCHHHHHHHTCEEECCCCCTC
T ss_pred             HHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHCCEEEECCCCCHH
T ss_conf             996271042014414214557664749999518352100333456


No 20 
>>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} (A:1-98,A:289-320)
Probab=99.07  E-value=6.8e-11  Score=80.98  Aligned_cols=42  Identities=26%  Similarity=0.469  Sum_probs=37.7

Q ss_pred             CHHH-CCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC
Q ss_conf             8023-88985999816560883336741244136431432435
Q gi|254780152|r    1 MLSH-AKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSI   42 (82)
Q Consensus         1 il~~-~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~   42 (82)
                      +|++ +|+||+|+++|+||||||+++|+++||+|+|+|++.+.
T Consensus        60 ~L~~~~~~LK~Ia~~gvG~DnIDi~aa~e~GI~V~NtPG~~~~  102 (130)
T 1gdh_A           60 VIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHSAAT  102 (130)
T ss_dssp             HHHHSCTTCCEEEEESSCCTTBCHHHHHHTTCEEECCCCTCBH
T ss_pred             HHHHCCCCCEEEEECCEECCHHCHHHHHHCCCEEECCCCCCHH
T ss_conf             9970658855999998603510799998779889828983559


No 21 
>>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} (A:1-102,A:300-333)
Probab=99.05  E-value=7.8e-11  Score=80.63  Aligned_cols=44  Identities=18%  Similarity=0.285  Sum_probs=37.7

Q ss_pred             CCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCC--CCHHHHH
Q ss_conf             8898599981656088333674124413643143243--5528999
Q gi|254780152|r    5 AKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNS--ITTAEHA   48 (82)
Q Consensus         5 ~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~--~sVAE~~   48 (82)
                      .|+||+|+++|+||||||+++|+++||+|+|+|++.-  ++|-.++
T Consensus        68 ~p~LKlI~~~gvG~DnIDi~aa~e~GI~V~N~Pgv~~~~~~~~~~~  113 (136)
T 1j4a_A           68 DNGITKMSLRNVGVDNIDMAKAKELGFQITNVPVYFYTTHAVRNMV  113 (136)
T ss_dssp             HTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCCSTCBHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
T ss_conf             1795599988754563249999978958997898708499999999


No 22 
>>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substrate-binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2h1s_A 2q50_A (A:1-107,A:298-330)
Probab=99.05  E-value=2.3e-10  Score=78.06  Aligned_cols=43  Identities=28%  Similarity=0.377  Sum_probs=38.3

Q ss_pred             HHH-CCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCH
Q ss_conf             023-8898599981656088333674124413643143243552
Q gi|254780152|r    2 LSH-AKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITT   44 (82)
Q Consensus         2 l~~-~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sV   44 (82)
                      |++ .|+||+|+++|+||||||+++|+++||.|+|+|+..++-+
T Consensus        70 L~a~~p~LK~Ia~~gvG~DnIDl~aa~~~GI~V~NtPg~~~~~~  113 (140)
T 2gcg_A           70 LDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDSATHRT  113 (140)
T ss_dssp             HHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTCBHHH
T ss_pred             HHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf             97111165343220343322233210011300011111071999


No 23 
>>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} (A:1-91,A:282-324)
Probab=99.03  E-value=6.2e-11  Score=81.18  Aligned_cols=64  Identities=22%  Similarity=0.215  Sum_probs=48.6

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      +|+++|+||+|+++|+||||||+++|+++||.|+|+|.-....|     .-+.+     ....+.+++|.--|.
T Consensus        55 lL~~~p~LK~Ia~~gaG~DnIDl~aa~erGI~VtNtP~~~~~~~-----~~~~~-----~~~~~~~~~~~~~~~  118 (134)
T 3evt_A           55 LARPTNQLKFVQVISAGVDYLPLKALQAAGVVVANTSAHFRATV-----FPIFA-----ANFAQFVKDGTLVRN  118 (134)
T ss_dssp             HHSTTCCCCEEECSSSCCTTSCHHHHHHTTCEEECCTCCHHHHH-----HHHHH-----HHHHHHHHHSCCCSC
T ss_pred             HHCCCCCCEEEEECCCCCCCCCHHHHHHCCEEEEECCHHHHHHH-----HHHHH-----HHHHHHHHCCCCCCC
T ss_conf             95354777299985876785277989867908994289999999-----99999-----999999968997887


No 24 
>>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} (A:1-101,A:300-331)
Probab=98.97  E-value=1.7e-10  Score=78.72  Aligned_cols=42  Identities=26%  Similarity=0.207  Sum_probs=36.8

Q ss_pred             CHHHCCC--CCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCC
Q ss_conf             8023889--85999816560883336741244136431432435
Q gi|254780152|r    1 MLSHAKK--MKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSI   42 (82)
Q Consensus         1 il~~~~~--Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~   42 (82)
                      +|+++|+  ||+|+++|+||||||+++|+++||+|+|+|+++-.
T Consensus        61 lL~~~p~l~LK~Is~~gvG~DnIDl~aa~erGI~V~NvPg~~~~  104 (133)
T 1xdw_A           61 NLDIYKKLGVKYILTRTAGTDHIDKEYAKELGFPMAFVPRYSYT  104 (133)
T ss_dssp             HHHHHHHHTCCEEEESSSCCTTBCHHHHHHTTCCEECCCCCTCS
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCHCH
T ss_conf             99842405980999877467764331123455378864014184


No 25 
>>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase family protein; structural genomics, protein structure initiative; 1.80A {Aeromonas salmonicida subsp} (A:1-97,A:282-324)
Probab=98.95  E-value=3.4e-10  Score=77.10  Aligned_cols=42  Identities=19%  Similarity=0.122  Sum_probs=38.2

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCC
Q ss_conf             8023889859998165608833367412441364314324355
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSIT   43 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~s   43 (82)
                      +|+++|+||+|+++|+|+||||+++|++ ||.|+|+|++.+.+
T Consensus        61 lL~~~p~LKlI~~~gvG~D~IDl~A~er-GI~VtN~pG~~~~~  102 (140)
T 3hg7_A           61 LLAKANKLSWFQSTYAGVDVLLDARCRR-DYQLTNVRGAYSFP  102 (140)
T ss_dssp             GGGGCTTCCEEEESSSCCGGGSCTTSCC-SSEEECCCSSCCCH
T ss_pred             HHHCCCCCEEEEECCEECCHHHHHHHHC-CCEEECCCCHHHHH
T ss_conf             9824998159998985207312668874-97684689865599


No 26 
>>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosynthesis, structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} (A:98-282)
Probab=98.37  E-value=3.7e-07  Score=60.31  Aligned_cols=43  Identities=42%  Similarity=0.701  Sum_probs=39.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             2435528999999999972779999999859986112140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~El   81 (82)
                      +|+.+|||++++++|++.|++..+++.+++|.|.+....|++|
T Consensus         1 aNa~sVAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~l   43 (185)
T 1ygy_A            1 SNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEI   43 (185)
T ss_dssp             SSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCC
T ss_conf             7848999999999887766688765202222333222200000


No 27 
>>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, serine metabolism; HET: NAD; 1.70A {Homo sapiens} (A:121-305)
Probab=98.35  E-value=4.3e-07  Score=59.98  Aligned_cols=43  Identities=47%  Similarity=0.825  Sum_probs=39.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             2435528999999999972779999999859986112140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~El   81 (82)
                      +|+.+|||++++++|++.|++..+++.+++|.|++..+.|++|
T Consensus         1 an~~~VAE~~l~~iL~~~R~~~~~~~~~~~g~w~~~~~~~~~l   43 (185)
T 2g76_A            1 GNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTEL   43 (185)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             4442009999999999973299999999809866567675135


No 28 
>>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infectious disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} (A:112-299)
Probab=98.31  E-value=5.3e-07  Score=59.46  Aligned_cols=43  Identities=30%  Similarity=0.407  Sum_probs=38.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             2435528999999999972779999999859986112140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~El   81 (82)
                      +|+.+|||++++++|++.|++..+++.+++|.|.+....+++|
T Consensus         1 aNa~~VAE~~l~~lL~~~R~~~~~~~~~~~g~w~~~~~~~~~l   43 (188)
T 3k5p_A            1 SNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREV   43 (188)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCS
T ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             6544046788887653222333100002358732112332101


No 29 
>>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} (A:101-288)
Probab=98.30  E-value=4.7e-07  Score=59.74  Aligned_cols=43  Identities=33%  Similarity=0.414  Sum_probs=39.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             2435528999999999972779999999859986112140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~El   81 (82)
                      +|+.+|||+++++||++.|++..+++.+++|.|.+..+.|.||
T Consensus         1 ana~~vAE~~l~~iL~~~R~~~~~~~~~~~g~w~~~~~~~~~l   43 (188)
T 1sc6_A            1 SNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEA   43 (188)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCS
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             5444116788775421100135555565427632235655444


No 30 
>>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} (A:103-299)
Probab=98.28  E-value=6.1e-07  Score=59.15  Aligned_cols=42  Identities=24%  Similarity=0.160  Sum_probs=38.0

Q ss_pred             CCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             435528999999999972779999999859986112140017
Q gi|254780152|r   40 NSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVEA   81 (82)
Q Consensus        40 ~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~El   81 (82)
                      |+.+|||++++++|++.|++..+++.+++|.|++....|.++
T Consensus         1 N~~sVAE~~i~~il~l~R~i~~~~~~~~~g~w~~~~~~~~~l   42 (197)
T 1j4a_A            1 SPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREV   42 (197)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
T ss_conf             868999999999999744255789999807853024466030


No 31 
>>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii OT3} (A:98-283)
Probab=98.22  E-value=1e-06  Score=57.92  Aligned_cols=43  Identities=37%  Similarity=0.624  Sum_probs=38.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             2435528999999999972779999999859986112140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~El   81 (82)
                      +|+.+|||++++++|++.|++..+++.+++|.|.+....|.+|
T Consensus         1 ana~~VAE~~l~~iL~~~R~~~~~~~~~~~~~w~~~~~~~~~l   43 (186)
T 1wwk_A            1 ASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIEL   43 (186)
T ss_dssp             GGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             3315688899888999884423678999748754446675314


No 32 
>>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} (A:92-281)
Probab=98.22  E-value=8.2e-07  Score=58.43  Aligned_cols=44  Identities=11%  Similarity=0.015  Sum_probs=40.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             32435528999999999972779999999859986112140017
Q gi|254780152|r   38 FGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVEA   81 (82)
Q Consensus        38 ~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~El   81 (82)
                      |+|+.+|||++++++|++.|++..+++.++++.|.+....+++|
T Consensus         1 G~~~~~vAE~~l~~~L~l~R~~~~~~~~~~~~~~~~~~~~~~~l   44 (190)
T 3evt_A            1 GIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTL   44 (190)
T ss_dssp             THHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
T ss_conf             74116677989999986551034320111001234556554433


No 33 
>>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus HB8} (A:97-279)
Probab=98.05  E-value=4.3e-06  Score=54.48  Aligned_cols=43  Identities=23%  Similarity=0.485  Sum_probs=37.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC---CCEEEEC
Q ss_conf             243552899999999997277999999985998611---2140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF---NFMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~---~~~G~El   81 (82)
                      .|+++|||+++++||++.|++..+++.+++|.|.+.   .+.|+||
T Consensus         1 v~a~~VAE~~l~~~L~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l   46 (183)
T 2cuk_A            1 VLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDL   46 (183)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCC
T ss_pred             CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             0233320000024565540416899999809744357545355213


No 34 
>>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} (A:102-299)
Probab=98.05  E-value=3.4e-06  Score=55.03  Aligned_cols=42  Identities=17%  Similarity=0.201  Sum_probs=36.0

Q ss_pred             CCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC-CEEEEC
Q ss_conf             435528999999999972779999999859986112-140017
Q gi|254780152|r   40 NSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN-FMGVEA   81 (82)
Q Consensus        40 ~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~-~~G~El   81 (82)
                      |+.+|||+++++||++.|++..+++.+++|.|.+.. +.|.||
T Consensus         1 N~~~VAE~~l~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l   43 (198)
T 1xdw_A            1 SPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEV   43 (198)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCG
T ss_pred             CCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             5434430334333201203567766543025555433456423


No 35 
>>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A (A:118-313)
Probab=98.05  E-value=3.1e-06  Score=55.25  Aligned_cols=43  Identities=26%  Similarity=0.369  Sum_probs=36.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC--CCEEEEC
Q ss_conf             243552899999999997277999999985998611--2140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF--NFMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~--~~~G~El   81 (82)
                      +|+.+|||++++++|++.|++..+++.+++|.|...  .+.|.||
T Consensus         1 aNa~~vAE~~l~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l   45 (196)
T 2j6i_A            1 SNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDI   45 (196)
T ss_dssp             SSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC
T ss_conf             877999999999999987648898888776430221234420333


No 36 
>>3kbo_A Glyoxylate/hydroxypyruvate reductase A; NADP, cytoplasm, NAD, structural genomics; HET: NDP NDB EPE; 2.14A {Salmonella enterica subsp} (A:96-280)
Probab=98.04  E-value=3.2e-06  Score=55.19  Aligned_cols=37  Identities=19%  Similarity=0.316  Sum_probs=34.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf             2435528999999999972779999999859986112
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN   75 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~   75 (82)
                      .++.||||++++++|++.|++..+++.+++|.|++..
T Consensus         2 a~s~svAE~~l~~~L~~~R~~~~~~~~~~~g~w~~~~   38 (185)
T 3kbo_A            2 GXGLQXQEYAVSQVLHWFRRFDDYQALKNQALWKPLP   38 (185)
T ss_dssp             THHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
T ss_conf             6789999999999999974442777766642102332


No 37 
>>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} (A:79-259)
Probab=98.02  E-value=3.6e-06  Score=54.86  Aligned_cols=37  Identities=38%  Similarity=0.425  Sum_probs=34.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             3243552899999999997277999999985998611
Q gi|254780152|r   38 FGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus        38 ~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      |+|+.+|||++++++|++.|++..+++.++++.|...
T Consensus         1 G~~~~svAE~~l~~~l~~~R~~~~~~~~~~~~~w~~~   37 (181)
T 3gvx_A            1 GAYSISVAEHAFALLLAHAKNILENNELXKAGIFRQS   37 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             5454889999999999997644665432012222222


No 38 
>>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase family protein; structural genomics, protein structure initiative; 1.80A {Aeromonas salmonicida subsp} (A:98-281)
Probab=98.00  E-value=4.3e-06  Score=54.46  Aligned_cols=36  Identities=19%  Similarity=0.342  Sum_probs=33.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             243552899999999997277999999985998611
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      .|+.+|||++++++|++.|++..+++.+++|.|+..
T Consensus         1 Vn~~~VAE~~l~~~l~~~R~~~~~~~~~~~~~w~~~   36 (184)
T 3hg7_A            1 IFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH   36 (184)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             762999999999998876323567787764101222


No 39 
>>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substrate-binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2h1s_A 2q50_A (A:108-297)
Probab=97.99  E-value=6.4e-06  Score=53.48  Aligned_cols=43  Identities=35%  Similarity=0.492  Sum_probs=36.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC---CCEEEEC
Q ss_conf             243552899999999997277999999985998611---2140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF---NFMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~---~~~G~El   81 (82)
                      .|+.+|||+++++||++.|++..+++.+++|.|...   .+.|++|
T Consensus         1 v~a~~VAE~~l~~iL~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l   46 (190)
T 2gcg_A            1 VLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGL   46 (190)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
T ss_conf             1112410332366655442057776666428843134434467331


No 40 
>>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} (A:81-263)
Probab=97.96  E-value=7.4e-06  Score=53.16  Aligned_cols=37  Identities=27%  Similarity=0.347  Sum_probs=33.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf             2435528999999999972779999999859986112
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN   75 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~   75 (82)
                      +|+.+|||++++++|++.|++..+++.+++|.|+...
T Consensus         1 ana~~VAE~~l~~~L~l~R~~~~~~~~~~~g~w~~~~   37 (183)
T 1qp8_A            1 SNADAVAEFALALLLAPYKRIIQYGEKXKRGDYGRDV   37 (183)
T ss_dssp             SSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             4667999999999999998887999999827754244


No 41 
>>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} (A:100-285)
Probab=97.95  E-value=8e-06  Score=52.97  Aligned_cols=37  Identities=24%  Similarity=0.372  Sum_probs=34.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf             2435528999999999972779999999859986112
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN   75 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~   75 (82)
                      +|+.+|||++++++|++.|++..+++.+++|.|++..
T Consensus         1 ~na~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~   37 (186)
T 2ekl_A            1 ASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIE   37 (186)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCC
T ss_pred             CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
T ss_conf             7531056677775442000258887654238754455


No 42 
>>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.95A {Pyrococcus horikoshii OT3} (A:95-286)
Probab=97.94  E-value=6.8e-06  Score=53.34  Aligned_cols=37  Identities=27%  Similarity=0.433  Sum_probs=34.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             3243552899999999997277999999985998611
Q gi|254780152|r   38 FGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus        38 ~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      |+++.+|||++++++|++.|++..+++.+++|.|...
T Consensus         1 G~~a~~VAE~~l~~~l~~~R~~~~~~~~~~~~~~~~~   37 (192)
T 2d0i_A            1 GLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESH   37 (192)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCH
T ss_pred             CCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCC
T ss_conf             2344102578999999997455876411015873212


No 43 
>>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenase, oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} (A:101-297)
Probab=97.93  E-value=5.1e-06  Score=54.06  Aligned_cols=42  Identities=26%  Similarity=0.398  Sum_probs=36.0

Q ss_pred             CCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC-CCEEEEC
Q ss_conf             43552899999999997277999999985998611-2140017
Q gi|254780152|r   40 NSITTAEHAISLMLAIARQIPVANESTHKGKWEKF-NFMGVEA   81 (82)
Q Consensus        40 ~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~-~~~G~El   81 (82)
                      ++++|||++++++|++.|++..+++.+++|.|.+. .+.|+||
T Consensus         1 s~~aVAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~l   43 (197)
T 1dxy_A            1 SPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKEL   43 (197)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             8279999999999999752599999987598575678775100


No 44 
>>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Ralstonia solanacearum} (A:108-302)
Probab=97.93  E-value=9.5e-06  Score=52.55  Aligned_cols=34  Identities=29%  Similarity=0.518  Sum_probs=31.5

Q ss_pred             CCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf             5528999999999972779999999859986112
Q gi|254780152|r   42 ITTAEHAISLMLAIARQIPVANESTHKGKWEKFN   75 (82)
Q Consensus        42 ~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~   75 (82)
                      +||||++++++|++.|++..+++.+++|.|++..
T Consensus         2 ~sVAE~~l~~~L~~~R~~~~~~~~~~~g~w~~~~   35 (195)
T 3gg9_A            2 VAPAELTWALVMAAQRRIPQYVASLKHGAWQQSG   35 (195)
T ss_dssp             HHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             0467899999999865345443332047632245


No 45 
>>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} (A:145-334)
Probab=97.93  E-value=7.2e-06  Score=53.22  Aligned_cols=43  Identities=28%  Similarity=0.461  Sum_probs=36.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC--CEEEEC
Q ss_conf             2435528999999999972779999999859986112--140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN--FMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~--~~G~El   81 (82)
                      +|+.+|||++++++|++.|++..+++.+++|.|+...  ..|.+|
T Consensus         1 ana~~vAE~~l~~il~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l   45 (190)
T 2nac_A            1 CNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDL   45 (190)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             383899999999999998620487889871676444334334424


No 46 
>>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepressor, transcription repressor; HET: NAD; 1.95A {Homo sapiens} (A:117-311)
Probab=97.90  E-value=8.3e-06  Score=52.87  Aligned_cols=36  Identities=14%  Similarity=0.201  Sum_probs=33.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             243552899999999997277999999985998611
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      +|+.+|||++++++|++.|++..+++.+++|.|+..
T Consensus         1 Ana~sVAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~   36 (195)
T 1mx3_A            1 ASVEETADSTLCHILNLYRRATWLHQALREGTRVQS   36 (195)
T ss_dssp             TTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             587999999999999999877999998651764333


No 47 
>>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} (A:1-78,A:260-290)
Probab=97.89  E-value=1.3e-05  Score=51.81  Aligned_cols=57  Identities=19%  Similarity=0.249  Sum_probs=46.9

Q ss_pred             HHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHH
Q ss_conf             238898599981656088333674124413643143243552899999999997277999
Q gi|254780152|r    3 SHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVA   62 (82)
Q Consensus         3 ~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~   62 (82)
                      +.+||||+|++.++|+|++|++..+++.|.++|+....   +.+.++.+...-.|++...
T Consensus        45 ~kaknLKwIQtiSAGVD~LPfe~Ip~~vIv~SNA~~~~---~~~~~~~~~~~~~~~~~~~  101 (109)
T 3gvx_A           45 VLGKRTKXIQAISAGVDHIDVNGIPENVVLCSNAXSGE---IXDIAIQLAFENVRNFFEG  101 (109)
T ss_dssp             CCCSSCCEEEECSSCCTTSCGGGSCTTSEEECCHBTTB---CCHHHHHHHHHHHHHHTC-
T ss_pred             HCCCCCEEEEECCEECCCCCHHHHHHCCEEEECCCHHH---HHHHHHHHHHHHHHHHHCC
T ss_conf             50898609999988335017988972987995477999---9999999999999999879


No 48 
>>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor binding domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* (A:119-301)
Probab=97.89  E-value=9.3e-06  Score=52.59  Aligned_cols=43  Identities=23%  Similarity=0.306  Sum_probs=36.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC-CEEEEC
Q ss_conf             2435528999999999972779999999859986112-140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN-FMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~-~~G~El   81 (82)
                      .|+.+|||++++++|++.|++..+++.+++|.|.+.. +.+.||
T Consensus         1 Vna~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~l   44 (183)
T 3ba1_A            1 VLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKF   44 (183)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCEE
T ss_conf             65688888998888765304432002210366453555455311


No 49 
>>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} (A:99-288)
Probab=97.87  E-value=1.3e-05  Score=51.86  Aligned_cols=43  Identities=26%  Similarity=0.453  Sum_probs=36.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC---CEEEEC
Q ss_conf             2435528999999999972779999999859986112---140017
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN---FMGVEA   81 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~---~~G~El   81 (82)
                      .|+.+|||++++++|++.|++..+++.+++|.|....   +.|.+|
T Consensus         1 ana~~VAE~~l~~~l~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l   46 (190)
T 1gdh_A            1 GVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKL   46 (190)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
T ss_conf             6618999999998765533389988776506434566445566340


No 50 
>>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B (A:112-306)
Probab=97.80  E-value=8.4e-06  Score=52.85  Aligned_cols=36  Identities=22%  Similarity=0.378  Sum_probs=33.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             243552899999999997277999999985998611
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      +|+.||||++++++|++.|++..+++.+++|.|.+.
T Consensus         1 Ana~sVAE~vl~~~L~~~R~~~~~~~~~~~~~w~~~   36 (195)
T 2w2k_A            1 AGDTATSDLALYLILSVFRLASYSERAARTGDPETF   36 (195)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHH
T ss_pred             ECCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             024333047885123331134433100024754433


No 51 
>>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, structural genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* (A:99-290)
Probab=97.65  E-value=2.7e-05  Score=50.04  Aligned_cols=34  Identities=29%  Similarity=0.461  Sum_probs=31.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCC
Q ss_conf             2435528999999999972779999999859986
Q gi|254780152|r   39 GNSITTAEHAISLMLAIARQIPVANESTHKGKWE   72 (82)
Q Consensus        39 ~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~   72 (82)
                      .|+++|||++++++|++.|++..+++.+++++|.
T Consensus         1 v~a~~VAE~~l~~~L~~~R~~~~~~~~~~~~~~~   34 (192)
T 2dbq_A            1 VLTDATADLAFALLLATARHVVKGDRFVRSGEWK   34 (192)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             3443047788876677777789999998735222


No 52 
>>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosphate ION, oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} (A:91-257)
Probab=94.57  E-value=0.0018  Score=39.95  Aligned_cols=32  Identities=16%  Similarity=0.101  Sum_probs=27.6

Q ss_pred             CCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCC
Q ss_conf             43552899999999997277999999985998
Q gi|254780152|r   40 NSITTAEHAISLMLAIARQIPVANESTHKGKW   71 (82)
Q Consensus        40 ~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W   71 (82)
                      |+++|||+++++||++.|++.......+-|.|
T Consensus         1 Na~~vaE~~i~~~l~~~R~~~~~l~g~~vgii   32 (167)
T 2o4c_A            1 NARGVVDYVLGCLLAMAEVRGADLAERTYGVV   32 (167)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTCCGGGCEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEE
T ss_conf             66999999999766655212313217602367


No 53 
>>3kbo_A Glyoxylate/hydroxypyruvate reductase A; NADP, cytoplasm, NAD, structural genomics; HET: NDP NDB EPE; 2.14A {Salmonella enterica subsp} (A:1-95,A:281-315)
Probab=93.42  E-value=0.043  Score=32.38  Aligned_cols=41  Identities=17%  Similarity=0.160  Sum_probs=30.5

Q ss_pred             HHHCCCCCEEEECCCCCCCC------CHHHHHCCCCEEEECCCCCCCC
Q ss_conf             02388985999816560883------3367412441364314324355
Q gi|254780152|r    2 LSHAKKMKVVGRAGIGTDNV------DLVVASRAGIVVMNTPFGNSIT   43 (82)
Q Consensus         2 l~~~~~Lk~I~~~g~G~d~I------D~~~~~~~gI~v~n~~~~~~~s   43 (82)
                      +-+.||||+|...|+|+|||      |....- .+|+++-.-++-+.+
T Consensus        54 l~~~PnLk~I~slgAGVD~Ll~~~~l~~~~LP-~~vPivRlvDa~t~~  100 (130)
T 3kbo_A           54 XLAGRRLKAVFVLGAGVDAILSKLNAHPEXLD-ASIPLFRLEDAVTRP  100 (130)
T ss_dssp             HHTTCCCSEEEESSSCCHHHHTTTTTCGGGSC-TTSCEECCCCCCCCH
T ss_pred             HHCCCCCEEEEECCCCCCCCCHHHHHCCCCEE-CCCCCCCCCCCCCHH
T ss_conf             73189973998799867545678896489665-144442233148799


No 54 
>>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} (A:124-315)
Probab=80.42  E-value=0.6  Score=26.04  Aligned_cols=33  Identities=3%  Similarity=-0.156  Sum_probs=22.0

Q ss_pred             CCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             552899999999997277999999985998611
Q gi|254780152|r   42 ITTAEHAISLMLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus        42 ~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      ++|||++....+.++|.+...++..+.+.|.+.
T Consensus         1 ~~~~~~~~~ae~~~~~~l~~~~~~~~~~~~~~~   33 (192)
T 1pjc_A            1 RSLPLLTPMSIIAGRLSVQFGARFLERQQGGRG   33 (192)
T ss_dssp             SCCTTTHHHHHHHHHHHHHHHHHHTSGGGTSCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             985311157887536789999998665059965


No 55 
>>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* (A:125-318)
Probab=76.62  E-value=0.47  Score=26.64  Aligned_cols=23  Identities=13%  Similarity=0.017  Sum_probs=19.2

Q ss_pred             CCHHHHHHHHHHHHHHCHHHHHH
Q ss_conf             55289999999999727799999
Q gi|254780152|r   42 ITTAEHAISLMLAIARQIPVANE   64 (82)
Q Consensus        42 ~sVAE~~i~l~L~l~R~~~~~~~   64 (82)
                      .||||++++++|.++|+....+.
T Consensus         7 ~~vaE~a~~~~l~~~r~~~~~~~   29 (194)
T 2vhw_A            7 APMSEVAGRLAAQVGAYHLMRTQ   29 (194)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             88665777789998776666404


No 56 
>>2eez_A Alanine dehydrogenase; TTHA0216, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.71A {Thermus thermophilus HB8} (A:123-315)
Probab=71.04  E-value=0.79  Score=25.36  Aligned_cols=26  Identities=12%  Similarity=0.065  Sum_probs=20.9

Q ss_pred             CCHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf             55289999999999727799999998
Q gi|254780152|r   42 ITTAEHAISLMLAIARQIPVANESTH   67 (82)
Q Consensus        42 ~sVAE~~i~l~L~l~R~~~~~~~~~~   67 (82)
                      .||||++++++|.+.|++.......+
T Consensus         7 ~~vae~a~~~~l~~~r~~~~~~~~~~   32 (193)
T 2eez_A            7 VPMSEVAGRMAPQVGAQFLEKPKGGR   32 (193)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSGGGTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             76678888999999998521115875


No 57 
>>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} (A:1-193)
Probab=59.55  E-value=2.4  Score=22.70  Aligned_cols=23  Identities=9%  Similarity=-0.000  Sum_probs=20.3

Q ss_pred             HHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             99997277999999985998611
Q gi|254780152|r   52 MLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus        52 ~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      ||++.|+++..++.++++.|...
T Consensus         1 ~l~~~r~~~~~~~~~~~~~~~~~   23 (193)
T 2uyy_A            1 MHHHHHHSSGVDLGTENLYFQSM   23 (193)
T ss_dssp             -----------------------
T ss_pred             CCCCCCCCCCCCCCCCCHHHCCC
T ss_conf             97533454556657640211322


No 58 
>>1vqz_A Lipoate-protein ligase, putative; NP_345629.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.99A {Streptococcus pneumoniae TIGR4} (A:50-91)
Probab=36.08  E-value=13  Score=18.57  Aligned_cols=19  Identities=16%  Similarity=0.246  Sum_probs=15.9

Q ss_pred             CCCCHHHHHCCCCEEEECC
Q ss_conf             8833367412441364314
Q gi|254780152|r   19 DNVDLVVASRAGIVVMNTP   37 (82)
Q Consensus        19 d~ID~~~~~~~gI~v~n~~   37 (82)
                      +-||+++|+++||.|.-=+
T Consensus        14 ~evn~~~~~~~~I~vvRR~   32 (42)
T 1vqz_A           14 EEINRDYVRENGIEVVRRI   32 (42)
T ss_dssp             GTBCHHHHHHHTCEEEECS
T ss_pred             HHHCHHHHHHCCCEEEEEE
T ss_conf             7768899987698199996


No 59 
>>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum 3D7} (A:227-394)
Probab=35.17  E-value=2.9  Score=22.22  Aligned_cols=20  Identities=10%  Similarity=-0.094  Sum_probs=13.7

Q ss_pred             HHHHCHHHHHHHHHCCCCCC
Q ss_conf             99727799999998599861
Q gi|254780152|r   54 AIARQIPVANESTHKGKWEK   73 (82)
Q Consensus        54 ~l~R~~~~~~~~~~~g~W~~   73 (82)
                      +++|++..+++.+++|.|++
T Consensus         1 A~~R~~~~~~~~~~~g~w~~   20 (168)
T 1v8b_A            1 AVTKQKYDNVYGCRHSLPDG   20 (168)
T ss_dssp             SHHHHTTHHHHHHHHHHHHH
T ss_pred             CCHHHHHCCHHHHHHHHHHH
T ss_conf             41544531023326888999


No 60 
>>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydrolase, cytoplasm, NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei 1710B} PDB: 3glq_A* (A:247-409)
Probab=34.00  E-value=7  Score=20.15  Aligned_cols=20  Identities=0%  Similarity=-0.132  Sum_probs=15.8

Q ss_pred             HHHHCHHHHHHHHHCCCCCC
Q ss_conf             99727799999998599861
Q gi|254780152|r   54 AIARQIPVANESTHKGKWEK   73 (82)
Q Consensus        54 ~l~R~~~~~~~~~~~g~W~~   73 (82)
                      +++|++..+++.+++|.|..
T Consensus         1 a~~R~~~~~~~~~~~g~w~~   20 (163)
T 3d64_A            1 SVTKSKFDNLYGCRESLVDG   20 (163)
T ss_dssp             SHHHHHHHHHHHHHTTHHHH
T ss_pred             HHHEEHHCCEEEEHHHHHHH
T ss_conf             13214000324432678999


No 61 
>>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE TAR; 2.10A {Bacillus halodurans} (A:126-269)
Probab=28.31  E-value=12  Score=18.80  Aligned_cols=24  Identities=29%  Similarity=0.253  Sum_probs=14.2

Q ss_pred             ECCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             314324355289999999999727
Q gi|254780152|r   35 NTPFGNSITTAEHAISLMLAIARQ   58 (82)
Q Consensus        35 n~~~~~~~sVAE~~i~l~L~l~R~   58 (82)
                      |++++++.+|||+++..++..+..
T Consensus         3 ~~~~~~~~~va~~~~~~~~~~~~~   26 (144)
T 3d4o_A            3 DIAIYNSIPTAEGTIXXAIQHTDF   26 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             355640288899999999970796


No 62 
>>2r7r_A RNA-dependent RNA polymerase; viral protein, RNA-dependent RNA polymerase, single subunit polymerase fold, fingers, PALM, thumb; 2.60A {Simian rotavirus} PDB: 2r7q_A 2r7s_A 2r7t_A 2r7u_A 2r7v_A 2r7w_A* 2r7x_A* 2r7o_A (A:869-921,A:1008-1074)
Probab=23.22  E-value=60  Score=15.00  Aligned_cols=52  Identities=23%  Similarity=0.463  Sum_probs=32.6

Q ss_pred             CCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCC
Q ss_conf             6560883336741244136431432435528999999999972779999999859986
Q gi|254780152|r   15 GIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWE   72 (82)
Q Consensus        15 g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~   72 (82)
                      |.-.-+||+....--  .+...|--.-.+    ++.+||.++-++.-.+..+++|.|-
T Consensus        47 gsrtyqiDfNS~dle--~lIriPfkgKiP----~vtFilhlyakL~iIN~aIk~g~wI   98 (120)
T 2r7r_A           47 GSRTYQIDFNSPDLE--KLIRIPFKGKIP----AVTFILHLYAKLEVINYAIKNGSWI   98 (120)
T ss_dssp             CBCSBCCCTTCHHHH--HTEECCCSSCCH----HHHHHHHHHHHHHHHHHHHHHSSEE
T ss_pred             CCEEEEECCCCHHHH--HHHCCCCCCCCC----EEEEHHHHHHHHHHHHHHHCCCCEE
T ss_conf             540111036863068--771164568887----0432688898899999987059679


No 63 
>>3bh1_A UPF0371 protein DIP2346; structural genomics, unknown function, protein structure initiative, PSI-2; 2.51A {Corynebacterium diphtheriae NCTC13129} (A:345-507)
Probab=22.28  E-value=23  Score=17.24  Aligned_cols=41  Identities=17%  Similarity=0.128  Sum_probs=31.5

Q ss_pred             HHHCCCCCEEEEC-CCCCCCCCHHHHHCCCCEEEECCCCCCC
Q ss_conf             0238898599981-6560883336741244136431432435
Q gi|254780152|r    2 LSHAKKMKVVGRA-GIGTDNVDLVVASRAGIVVMNTPFGNSI   42 (82)
Q Consensus         2 l~~~~~Lk~I~~~-g~G~d~ID~~~~~~~gI~v~n~~~~~~~   42 (82)
                      +++.|+||-...+ ++=....|....++.||.|+.-|.+...
T Consensus       108 l~qL~~LkGcqaHsTvIls~~De~~frkLGi~vT~eP~y~~~  149 (163)
T 3bh1_A          108 LDQLKNLRGCDVHTTTILGSVDEGIFRNLGVLVTSDPKFQKN  149 (163)
T ss_dssp             HTTGGGGTTCEEEESSCCCHHHHHHHHHTTCEEEECSCCC--
T ss_pred             HHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEECCCCCCCC
T ss_conf             972233269842575368843699999648723127766611


Done!