HHsearch results for GI: 254780152 and protein with PDBid: 1gdh_A
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.75 E-value=1.6e-18 Score=122.32 Aligned_cols=81 Identities=27% Similarity=0.469 Sum_probs=72.7
Q ss_pred CHHHCC-CCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC---CC
Q ss_conf 802388-98599981656088333674124413643143243552899999999997277999999985998611---21
Q gi|254780152|r 1 MLSHAK-KMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF---NF 76 (82)
Q Consensus 1 il~~~~-~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~---~~ 76 (82)
+|+++| +||+|+++|+|+||||+++|+++||.|+|+|++++.+|||++++++|++.|++..+++.++++.|.++ .+
T Consensus 60 ~l~~~~~~LK~I~~~~~G~D~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~~~~~~~~~~~~ 139 (320)
T 1gdh_A 60 VIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLEL 139 (320)
T ss_dssp HHHHSCTTCCEEEEESSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTT
T ss_pred HHHHCCCCCCEEEECCEECCHHCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 99716688728999987445126999997799999789967199999999999997523466655443212465543342
Q ss_pred EEEEC
Q ss_conf 40017
Q gi|254780152|r 77 MGVEA 81 (82)
Q Consensus 77 ~G~El 81 (82)
.|.||
T Consensus 140 ~g~~l 144 (320)
T 1gdh_A 140 VGEKL 144 (320)
T ss_dssp CBCCC
T ss_pred CCEEE
T ss_conf 54262