Query         gi|254780152|ref|YP_003064565.1| D-3-phosphoglycerate dehydrogenase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 82
No_of_seqs    110 out of 4711
Neff          6.8 
Searched_HMMs 23785
Date          Sun May 22 17:20:07 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780152.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1ygy_A PGDH, D-3-phosphoglycer  99.9 4.4E-23 1.9E-27  147.4   7.5   81    1-81     60-140 (529)
  2 2g76_A 3-PGDH, D-3-phosphoglyc  99.9 6.1E-23 2.6E-27  146.7   7.2   81    1-81     83-163 (335)
  3 1sc6_A PGDH, D-3-phosphoglycer  99.9 2.6E-22 1.1E-26  143.2   6.8   82    1-82     63-144 (404)
  4 3k5p_A D-3-phosphoglycerate de  99.9 3.1E-22 1.3E-26  142.8   7.1   82    1-82     74-155 (416)
  5 1mx3_A CTBP1, C-terminal bindi  99.9 4.1E-22 1.7E-26  142.1   6.9   74    1-74     79-152 (347)
  6 2nac_A NAD-dependent formate d  99.9 3.7E-22 1.6E-26  142.3   6.5   75    1-75    107-181 (393)
  7 3ba1_A HPPR, hydroxyphenylpyru  99.8 1.1E-21 4.6E-26  139.7   6.5   81    1-81     81-162 (333)
  8 3jtm_A Formate dehydrogenase,   99.8 7.8E-21 3.3E-25  135.0   6.8   81    1-81     80-162 (351)
  9 2w2k_A D-mandelate dehydrogena  99.8 2.8E-21 1.2E-25  137.5   3.4   74    1-74     73-147 (348)
 10 2d0i_A Dehydrogenase; structur  99.8 2.5E-20   1E-24  132.3   5.9   75    1-75     58-132 (333)
 11 2j6i_A Formate dehydrogenase;   99.8 3.2E-20 1.3E-24  131.7   6.3   81    1-81     78-162 (364)
 12 1dxy_A D-2-hydroxyisocaproate   99.8 2.5E-20   1E-24  132.2   5.4   80    2-81     61-143 (333)
 13 1j4a_A D-LDH, D-lactate dehydr  99.8   4E-20 1.7E-24  131.1   5.1   80    2-81     63-144 (333)
 14 2dbq_A Glyoxylate reductase; D  99.8 4.6E-20   2E-24  130.7   5.4   75    1-75     61-135 (334)
 15 3evt_A Phosphoglycerate dehydr  99.8   1E-19 4.3E-24  128.9   6.0   78    4-81     58-135 (324)
 16 2pi1_A D-lactate dehydrogenase  99.8 2.6E-19 1.1E-23  126.6   6.8   80    1-80     58-138 (334)
 17 1xdw_A NAD+-dependent (R)-2-hy  99.8 1.1E-19 4.5E-24  128.8   4.3   80    2-81     62-144 (331)
 18 2cuk_A Glycerate dehydrogenase  99.8 1.2E-18   5E-23  122.9   7.1   81    1-81     59-142 (311)
 19 1wwk_A Phosphoglycerate dehydr  99.8 1.1E-18 4.6E-23  123.2   6.8   81    1-81     60-140 (307)
 20 1gdh_A D-glycerate dehydrogena  99.8 1.6E-18 6.5E-23  122.3   7.4   81    1-81     60-144 (320)
 21 2gcg_A Glyoxylate reductase/hy  99.7 2.4E-18 9.9E-23  121.3   6.9   80    2-81     70-153 (330)
 22 1qp8_A Formate dehydrogenase;   99.7 1.5E-18 6.2E-23  122.5   5.4   73    1-74     44-116 (303)
 23 3hg7_A D-isomer specific 2-hyd  99.7 3.4E-18 1.4E-22  120.5   6.9   75    1-76     61-135 (324)
 24 2ekl_A D-3-phosphoglycerate de  99.7 5.5E-18 2.3E-22  119.3   7.2   79    1-81     62-140 (313)
 25 3gg9_A D-3-phosphoglycerate de  99.7 8.1E-18 3.4E-22  118.4   7.3   74    1-75     65-142 (352)
 26 3gvx_A Glycerate dehydrogenase  99.7   7E-18 2.9E-22  118.7   5.5   73    2-75     44-116 (290)
 27 3kbo_A Glyoxylate/hydroxypyruv  99.6 1.4E-16 5.8E-21  111.6   4.1   74    2-75     54-133 (315)
 28 2o4c_A Erythronate-4-phosphate  99.5 9.2E-15 3.9E-19  101.5   4.4   55    2-57     54-108 (380)
 29 3oet_A Erythronate-4-phosphate  99.5   2E-14 8.6E-19   99.6   5.5   55    4-58     58-112 (381)
 30 1wyz_A Putative S-adenosylmeth  23.2      22 0.00091   16.6   0.9   24   22-45    104-127 (242)

No 1  
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosynthesis, structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.88  E-value=4.4e-23  Score=147.44  Aligned_cols=81  Identities=44%  Similarity=0.745  Sum_probs=78.1

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611214001
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVE   80 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~E   80 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.+..+.|.|
T Consensus        60 ~l~~~p~LK~I~~~g~G~D~iD~~~a~~~gI~V~n~p~~~~~~vAE~~i~l~L~l~R~i~~~~~~~~~g~w~~~~~~~~~  139 (529)
T 1ygy_A           60 VLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTE  139 (529)
T ss_dssp             HHHTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCC
T ss_pred             HHHCCCCCCEEEECCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             98159998099999832341168879868999998898787999999999999987636899888861872002556631


Q ss_pred             C
Q ss_conf             7
Q gi|254780152|r   81 A   81 (82)
Q Consensus        81 l   81 (82)
                      |
T Consensus       140 L  140 (529)
T 1ygy_A          140 I  140 (529)
T ss_dssp             C
T ss_pred             C
T ss_conf             3


No 2  
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, serine metabolism; HET: NAD; 1.70A {Homo sapiens}
Probab=99.88  E-value=6.1e-23  Score=146.65  Aligned_cols=81  Identities=53%  Similarity=0.877  Sum_probs=78.2

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611214001
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVE   80 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~E   80 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++++.+|||+++++||+++|+++.+++.+++|.|++..+.|.|
T Consensus        83 vl~~~~~LK~I~~~g~G~D~iD~~~a~~~gI~v~n~p~~~~~~VAE~~i~~iL~l~R~i~~~~~~~~~g~w~~~~~~g~e  162 (335)
T 2g76_A           83 VINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTE  162 (335)
T ss_dssp             HHHHCSSCCEEEESSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCC
T ss_pred             HHHCCCCCEEEEECCCCCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             99319997699966854562669999867905742798763147999999999996167999999980987656767623


Q ss_pred             C
Q ss_conf             7
Q gi|254780152|r   81 A   81 (82)
Q Consensus        81 l   81 (82)
                      |
T Consensus       163 L  163 (335)
T 2g76_A          163 L  163 (335)
T ss_dssp             C
T ss_pred             C
T ss_conf             5


No 3  
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.86  E-value=2.6e-22  Score=143.16  Aligned_cols=82  Identities=37%  Similarity=0.553  Sum_probs=78.4

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611214001
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVE   80 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~E   80 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++++.+|||++++++|++.|++..++..++++.|.+..+.|.|
T Consensus        63 ~l~~~~~Lk~I~~~g~G~d~Id~~~a~~~GI~V~n~pg~n~~aVaE~~l~l~l~~~R~~~~~~~~~~~~~w~~~~~~~~e  142 (404)
T 1sc6_A           63 VINAAEKLVAIGAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFE  142 (404)
T ss_dssp             HHHHCSSCCEEEECSSCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCC
T ss_pred             HHHCCCCCEEEEECCCCCCCHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             99508987499994753364100301033201463157544411678877542110013555556542763223565544


Q ss_pred             CC
Q ss_conf             78
Q gi|254780152|r   81 AG   82 (82)
Q Consensus        81 lG   82 (82)
                      |.
T Consensus       143 l~  144 (404)
T 1sc6_A          143 AR  144 (404)
T ss_dssp             ST
T ss_pred             CC
T ss_conf             43


No 4  
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infectious disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.86  E-value=3.1e-22  Score=142.79  Aligned_cols=82  Identities=33%  Similarity=0.527  Sum_probs=78.2

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611214001
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVE   80 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~E   80 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++++.+|||++++++|+++|++...+..+++|.|++..+.|.|
T Consensus        74 ~l~~~~~Lk~I~~~gaG~d~Id~~~~~~~gI~V~n~pg~na~aVAE~~i~~iL~l~R~i~~~~~~~~~~~w~~~~~~~~~  153 (416)
T 3k5p_A           74 IFAAANRLIAVGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSRE  153 (416)
T ss_dssp             HHHHCTTCCEEEECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCC
T ss_pred             HHHCCCCCCEEEECCEECCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
T ss_conf             99339997299989862130069989978979997698662289999999988653102566545431771103667624


Q ss_pred             CC
Q ss_conf             78
Q gi|254780152|r   81 AG   82 (82)
Q Consensus        81 lG   82 (82)
                      +.
T Consensus       154 l~  155 (416)
T 3k5p_A          154 VR  155 (416)
T ss_dssp             ST
T ss_pred             EC
T ss_conf             04


No 5  
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepressor, transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.86  E-value=4.1e-22  Score=142.06  Aligned_cols=74  Identities=26%  Similarity=0.386  Sum_probs=71.1

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++++.+|||++++++|++.|++..+++.+++|.|.+.
T Consensus        79 ~l~~~p~LK~I~~~g~G~D~iD~~~~~~~gI~V~n~pg~~~~~VAE~~l~liL~~~R~i~~~~~~~~~g~~~~~  152 (347)
T 1mx3_A           79 DLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQS  152 (347)
T ss_dssp             HHTTCSSCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCS
T ss_pred             HHHCCCCCCEEEECCEECCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             99539986179999862251559989878999997998587999999999999998753899886532764222


No 6  
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.86  E-value=3.7e-22  Score=142.33  Aligned_cols=75  Identities=33%  Similarity=0.550  Sum_probs=71.8

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf             802388985999816560883336741244136431432435528999999999972779999999859986112
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN   75 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~   75 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|.+..
T Consensus       107 ~l~~ap~LK~I~~~g~G~D~IDl~aa~~~gI~V~n~~g~~~~sVAE~~i~liL~l~R~~~~~~~~~~~g~w~~~~  181 (393)
T 2nac_A          107 RIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIAD  181 (393)
T ss_dssp             HHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHH
T ss_pred             HHHCCCCCEEEEECCEECCHHCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
T ss_conf             993699980999898331320598898689999988984819999999999999986330889999808975233


No 7  
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.85  E-value=1.1e-21  Score=139.73  Aligned_cols=81  Identities=27%  Similarity=0.402  Sum_probs=74.4

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC-CCEEE
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611-21400
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF-NFMGV   79 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~-~~~G~   79 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++++.+|||+++++||++.|++..++..++++.|.+. ...|.
T Consensus        81 ~l~~~p~LK~I~~~g~G~D~ID~~~~~~~gI~V~n~pg~~~~~VAE~al~liLal~R~~~~~~~~~~~~~~~~~~~~~~~  160 (333)
T 3ba1_A           81 LIDALPKLEIVSSFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTT  160 (333)
T ss_dssp             HHHHCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCC
T ss_pred             HHHCCCCCCEEEECCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC
T ss_conf             99439976279889842250558889868978970898678999999999999874022455555421664535554554


Q ss_pred             EC
Q ss_conf             17
Q gi|254780152|r   80 EA   81 (82)
Q Consensus        80 El   81 (82)
                      +|
T Consensus       161 ~l  162 (333)
T 3ba1_A          161 KF  162 (333)
T ss_dssp             CC
T ss_pred             EE
T ss_conf             23


No 8  
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.82  E-value=7.8e-21  Score=135.01  Aligned_cols=81  Identities=27%  Similarity=0.462  Sum_probs=74.8

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC--CCEE
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611--2140
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF--NFMG   78 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~--~~~G   78 (82)
                      +|+++||||+|+++|+|+||||+++|+++||.|+|+|++++.+|||+++++||++.|++...++.+++|.|.+.  .+.|
T Consensus        80 ~l~~~p~LK~I~~~~~G~D~id~~~~~~~gI~V~n~~g~~~~~vAE~~l~~iL~~~r~~~~~~~~~~~g~~~~~~~~~~~  159 (351)
T 3jtm_A           80 RIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRA  159 (351)
T ss_dssp             HHHHCSSCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTC
T ss_pred             HHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             99449997079886860565254433679869998998786999999999999997521577766432863234556663


Q ss_pred             EEC
Q ss_conf             017
Q gi|254780152|r   79 VEA   81 (82)
Q Consensus        79 ~El   81 (82)
                      +||
T Consensus       160 ~~L  162 (351)
T 3jtm_A          160 YDL  162 (351)
T ss_dssp             CCS
T ss_pred             EEC
T ss_conf             311


No 9  
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.82  E-value=2.8e-21  Score=137.48  Aligned_cols=74  Identities=27%  Similarity=0.413  Sum_probs=70.1

Q ss_pred             CHHHCC-CCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             802388-98599981656088333674124413643143243552899999999997277999999985998611
Q gi|254780152|r    1 MLSHAK-KMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus         1 il~~~~-~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      +|+++| +||+|+++|+|+||||+++|+++||.|+|+|++++.+|||+++++||+++|++..+++.+|+|.|.+.
T Consensus        73 ~l~~~p~~Lk~I~~~~~G~d~iD~~~~~~~gI~v~n~~~~~~~~VAE~~l~liL~~~R~~~~~~~~~~~~~w~~~  147 (348)
T 2w2k_A           73 LISHLPSSLKVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETF  147 (348)
T ss_dssp             HHTTSCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHH
T ss_pred             HHHHCCCCCEEEEECCCCCCHHCHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
T ss_conf             997331172799998836650069999869938997898783479999999999853111566666441664323


No 10 
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.95A {Pyrococcus horikoshii OT3}
Probab=99.80  E-value=2.5e-20  Score=132.26  Aligned_cols=75  Identities=31%  Similarity=0.495  Sum_probs=71.3

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf             802388985999816560883336741244136431432435528999999999972779999999859986112
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN   75 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~   75 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++++.+|||+++++||++.|++..+++.+++|.|.+..
T Consensus        58 ~l~~~~~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~~~~~~~VAE~~l~~iL~l~R~l~~~~~~~~~g~~~~~~  132 (333)
T 2d0i_A           58 VLENAERLKVISCHSAGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHA  132 (333)
T ss_dssp             HHTTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHH
T ss_pred             HHHCCCCCEEEEECCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
T ss_conf             991699980998898133401799998679999978986647899999999999972635766665348732111


No 11 
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.80  E-value=3.2e-20  Score=131.66  Aligned_cols=81  Identities=31%  Similarity=0.462  Sum_probs=73.0

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCC--CEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC--C
Q ss_conf             802388985999816560883336741244--136431432435528999999999972779999999859986112--1
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAG--IVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN--F   76 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~g--I~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~--~   76 (82)
                      +|+++||||+|+++|+|+||||+++|+++|  |.|+|+|++++.+|||++++++|++.|++..++..+++|.|.+..  .
T Consensus        78 ~l~~a~~LK~I~~~~~G~d~iD~~~~~~~G~~I~v~n~~g~~a~~VAE~~l~l~L~l~R~~~~~~~~~~~~~w~~~~~~~  157 (364)
T 2j6i_A           78 RIDKAKKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAK  157 (364)
T ss_dssp             HHHHCTTCCEEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHT
T ss_pred             HHHCCCCCCEEEECCCCCCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCC
T ss_conf             99319997099999801351059999971992799978998979999999999999984629999999837654333466


Q ss_pred             EEEEC
Q ss_conf             40017
Q gi|254780152|r   77 MGVEA   81 (82)
Q Consensus        77 ~G~El   81 (82)
                      .|.||
T Consensus       158 ~~~~l  162 (364)
T 2j6i_A          158 DAYDI  162 (364)
T ss_dssp             TCCCS
T ss_pred             CCCCC
T ss_conf             75345


No 12 
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenase, oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.80  E-value=2.5e-20  Score=132.24  Aligned_cols=80  Identities=28%  Similarity=0.418  Sum_probs=72.1

Q ss_pred             HHH--CCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC-CCEE
Q ss_conf             023--8898599981656088333674124413643143243552899999999997277999999985998611-2140
Q gi|254780152|r    2 LSH--AKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF-NFMG   78 (82)
Q Consensus         2 l~~--~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~-~~~G   78 (82)
                      |++  +++||+|+++|+|+||||+++|+++||.|+|+|++++.+|||++++++|++.|++..++..++.|.|.+. .+.|
T Consensus        61 i~~~~~~nLK~I~~~~~G~D~ID~~~~~~~gI~v~n~~g~~a~aVAE~~l~~iL~l~R~~~~~~~~~~~g~~~~~~~~~~  140 (333)
T 1dxy_A           61 FEKMHAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIG  140 (333)
T ss_dssp             HHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCC
T ss_pred             HHHCCCCCCEEEEECCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             97373269879998982567459889962987999799848378999999999987540489999876165445566565


Q ss_pred             EEC
Q ss_conf             017
Q gi|254780152|r   79 VEA   81 (82)
Q Consensus        79 ~El   81 (82)
                      .||
T Consensus       141 ~~L  143 (333)
T 1dxy_A          141 KEL  143 (333)
T ss_dssp             CCG
T ss_pred             CCC
T ss_conf             114


No 13 
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.79  E-value=4e-20  Score=131.11  Aligned_cols=80  Identities=24%  Similarity=0.277  Sum_probs=73.3

Q ss_pred             HHHCC--CCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             02388--9859998165608833367412441364314324355289999999999727799999998599861121400
Q gi|254780152|r    2 LSHAK--KMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGV   79 (82)
Q Consensus         2 l~~~~--~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~   79 (82)
                      |+++|  +||+|+++|+|+||||+++|+++||.|+|+|++++.+|||++++++|++.|++..+++.+++++|.+..+.|.
T Consensus        63 l~~~~~~~Lk~I~~~~~G~d~iD~~~~~~~gI~v~n~~~~~~~~vAE~~~~~il~~~R~~~~~~~~~~~~~~~~~~~~g~  142 (333)
T 1j4a_A           63 LQALADNGITKMSLRNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGR  142 (333)
T ss_dssp             HHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBC
T ss_pred             HHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf             98544079669998876246314999987895899789878689999999999998654258999998278764787752


Q ss_pred             EC
Q ss_conf             17
Q gi|254780152|r   80 EA   81 (82)
Q Consensus        80 El   81 (82)
                      ||
T Consensus       143 ~l  144 (333)
T 1j4a_A          143 EV  144 (333)
T ss_dssp             CG
T ss_pred             EE
T ss_conf             40


No 14 
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, structural genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.79  E-value=4.6e-20  Score=130.75  Aligned_cols=75  Identities=33%  Similarity=0.531  Sum_probs=71.4

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf             802388985999816560883336741244136431432435528999999999972779999999859986112
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN   75 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~   75 (82)
                      +|+++|+||+|+++|+|+||||+++|.++||.|+|+|++++.+|||+++++||++.|++..+++.+++|.|.+..
T Consensus        61 ~l~~~p~LK~I~~~~~G~d~id~~~~~~~~I~v~n~~g~~~~~VAE~~l~~iL~l~R~l~~~~~~~~~g~w~~~~  135 (334)
T 2dbq_A           61 VFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRG  135 (334)
T ss_dssp             HHHTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTT
T ss_pred             HHHCCCCCCEEEECCCCCCCCCHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             994499983999888644500689998669653328987740448999999999865546889999808753355


No 15 
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.78  E-value=1e-19  Score=128.88  Aligned_cols=78  Identities=21%  Similarity=0.196  Sum_probs=70.0

Q ss_pred             HCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             388985999816560883336741244136431432435528999999999972779999999859986112140017
Q gi|254780152|r    4 HAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVEA   81 (82)
Q Consensus         4 ~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~El   81 (82)
                      ..|+||+|++.|+|+||||+++|+++||.|+|+|++++.+|||+++++||++.|++..+....+.+.|.+..+.+.||
T Consensus        58 ~~~~Lk~I~~~~aG~D~id~~~~~~~gI~v~n~~g~~~~~VAE~~l~~~L~~~R~~~~~~~~~~~~~~~~~~~~~~~l  135 (324)
T 3evt_A           58 PTNQLKFVQVISAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTL  135 (324)
T ss_dssp             TTCCCCEEECSSSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCS
T ss_pred             CCCCCEEEEECCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCE
T ss_conf             658871999898340621499998789689951874789999999999999985352889987505533367666530


No 16 
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.78  E-value=2.6e-19  Score=126.63  Aligned_cols=80  Identities=21%  Similarity=0.433  Sum_probs=72.8

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC-CEEE
Q ss_conf             802388985999816560883336741244136431432435528999999999972779999999859986112-1400
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN-FMGV   79 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~-~~G~   79 (82)
                      +|+++|+||+|+++|+|+||||+++|.++||.|+|+|++++.+|||++++++|++.|++..+.+.++.+.|.+.. ..|.
T Consensus        58 ~l~~~p~Lk~I~~~~aG~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~l~~il~~~r~l~~~~~~~~~~~~~~~~~~~~~  137 (334)
T 2pi1_A           58 LLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILAR  137 (334)
T ss_dssp             HHTTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBC
T ss_pred             HHHCCCCCCEEEECCCCCCCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99459987089888850575486588739918995798580899999999988875233100221123553222343442


Q ss_pred             E
Q ss_conf             1
Q gi|254780152|r   80 E   80 (82)
Q Consensus        80 E   80 (82)
                      +
T Consensus       138 ~  138 (334)
T 2pi1_A          138 E  138 (334)
T ss_dssp             C
T ss_pred             E
T ss_conf             1


No 17 
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.77  E-value=1.1e-19  Score=128.76  Aligned_cols=80  Identities=23%  Similarity=0.230  Sum_probs=71.4

Q ss_pred             HHHCCC--CCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC-CEE
Q ss_conf             023889--85999816560883336741244136431432435528999999999972779999999859986112-140
Q gi|254780152|r    2 LSHAKK--MKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN-FMG   78 (82)
Q Consensus         2 l~~~~~--Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~-~~G   78 (82)
                      |+.+|+  ||+|+++|+|+||||+++|+++||.|+|+|++++.+|||++++++|++.|++..+++.+++|.|.+.. ..|
T Consensus        62 l~~~~~l~lK~I~~~~aG~D~iD~~~~~~~gI~v~n~~g~~~~~VAE~~l~~iL~~~R~~~~~~~~~~~~~~~~~~~~~~  141 (331)
T 1xdw_A           62 LDIYKKLGVKYILTRTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFS  141 (331)
T ss_dssp             HHHHHHHTCCEEEESSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCC
T ss_pred             HHHCCCCCCCEEEECCCCCCCCCHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             97452059709998883665007998973988999799988167999999999999877677655543135433355454


Q ss_pred             EEC
Q ss_conf             017
Q gi|254780152|r   79 VEA   81 (82)
Q Consensus        79 ~El   81 (82)
                      .||
T Consensus       142 ~~l  144 (331)
T 1xdw_A          142 KEV  144 (331)
T ss_dssp             CCG
T ss_pred             CEE
T ss_conf             143


No 18 
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus HB8}
Probab=99.75  E-value=1.2e-18  Score=122.95  Aligned_cols=81  Identities=31%  Similarity=0.492  Sum_probs=74.6

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC---CCCE
Q ss_conf             8023889859998165608833367412441364314324355289999999999727799999998599861---1214
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEK---FNFM   77 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~---~~~~   77 (82)
                      +|+++|+||+|+++|+|+||||+++|+++||.|+|+|++++.+|||++++++|+++|++..+++.+++|.|.+   ..+.
T Consensus        59 ~l~~~pnLK~I~~~~aG~D~Id~~~~~~~gi~v~n~~~~~~~~vaE~~~~lll~l~r~i~~~~~~~~~~~w~~~~~~~~~  138 (311)
T 2cuk_A           59 VMDRAKGLKVIACYSVGVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLL  138 (311)
T ss_dssp             HHHHSTTCCEEECSSSCCTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTC
T ss_pred             HHHCCCCCEEEEECCCCCCCCCHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf             99339998599988830375077789866946741799740667777766668877153178999871753335754545


Q ss_pred             EEEC
Q ss_conf             0017
Q gi|254780152|r   78 GVEA   81 (82)
Q Consensus        78 G~El   81 (82)
                      |+||
T Consensus       139 g~~l  142 (311)
T 2cuk_A          139 GLDL  142 (311)
T ss_dssp             BCCC
T ss_pred             CCCC
T ss_conf             5324


No 19 
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii OT3}
Probab=99.75  E-value=1.1e-18  Score=123.19  Aligned_cols=81  Identities=41%  Similarity=0.688  Sum_probs=77.2

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611214001
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVE   80 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~E   80 (82)
                      +|+++|+||+|++.++|+||||.+.|.++||.|+|+|++++.+|||++++++|++.|++..+++.+++|.|.+..+.|.|
T Consensus        60 ~l~~~p~LK~I~~~~aG~d~id~~~~~~~~I~v~n~~g~~~~~VAE~~l~~iL~~~R~~~~~~~~~~~~~~~~~~~~~~~  139 (307)
T 1wwk_A           60 VIESAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIE  139 (307)
T ss_dssp             HHTTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCC
T ss_pred             HHHCCCCCEEEEECCCCCCCCCHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEE
T ss_conf             99429998799988852675178989733946745898558999999999999998523367899983986545777440


Q ss_pred             C
Q ss_conf             7
Q gi|254780152|r   81 A   81 (82)
Q Consensus        81 l   81 (82)
                      |
T Consensus       140 l  140 (307)
T 1wwk_A          140 L  140 (307)
T ss_dssp             C
T ss_pred             C
T ss_conf             4


No 20 
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.75  E-value=1.6e-18  Score=122.32  Aligned_cols=81  Identities=27%  Similarity=0.469  Sum_probs=72.7

Q ss_pred             CHHHCC-CCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC---CC
Q ss_conf             802388-98599981656088333674124413643143243552899999999997277999999985998611---21
Q gi|254780152|r    1 MLSHAK-KMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF---NF   76 (82)
Q Consensus         1 il~~~~-~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~---~~   76 (82)
                      +|+++| +||+|+++|+|+||||+++|+++||.|+|+|++++.+|||++++++|++.|++..+++.++++.|.++   .+
T Consensus        60 ~l~~~~~~LK~I~~~~~G~D~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~l~l~~~R~i~~~~~~~~~~~~~~~~~~~~  139 (320)
T 1gdh_A           60 VIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLEL  139 (320)
T ss_dssp             HHHHSCTTCCEEEEESSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTT
T ss_pred             HHHHCCCCCCEEEECCEECCHHCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             99716688728999987445126999997799999789967199999999999997523466655443212465543342


Q ss_pred             EEEEC
Q ss_conf             40017
Q gi|254780152|r   77 MGVEA   81 (82)
Q Consensus        77 ~G~El   81 (82)
                      .|.||
T Consensus       140 ~g~~l  144 (320)
T 1gdh_A          140 VGEKL  144 (320)
T ss_dssp             CBCCC
T ss_pred             CCEEE
T ss_conf             54262


No 21 
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substrate-binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.74  E-value=2.4e-18  Score=121.33  Aligned_cols=80  Identities=34%  Similarity=0.486  Sum_probs=72.0

Q ss_pred             HHHC-CCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC---CE
Q ss_conf             0238-8985999816560883336741244136431432435528999999999972779999999859986112---14
Q gi|254780152|r    2 LSHA-KKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN---FM   77 (82)
Q Consensus         2 l~~~-~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~---~~   77 (82)
                      |+++ |+||+|+++|+|+||||+++|+++||.|+|+|++++.+|||+++++||+++|++...++.+++|.|....   ..
T Consensus        70 l~~~~~~LK~I~~~~aG~d~id~~~~~~~gi~v~~~~~~~~~~vae~~l~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~  149 (330)
T 2gcg_A           70 LDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLC  149 (330)
T ss_dssp             HHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSC
T ss_pred             HHHCCCCCEEEEECCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             97008995499899854360179999867988997898423889999999998876323899999972996423432446


Q ss_pred             EEEC
Q ss_conf             0017
Q gi|254780152|r   78 GVEA   81 (82)
Q Consensus        78 G~El   81 (82)
                      |++|
T Consensus       150 ~~~l  153 (330)
T 2gcg_A          150 GYGL  153 (330)
T ss_dssp             BCCC
T ss_pred             CCEE
T ss_conf             7421


No 22 
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.74  E-value=1.5e-18  Score=122.46  Aligned_cols=73  Identities=21%  Similarity=0.263  Sum_probs=69.0

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKF   74 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~   74 (82)
                      +|+++|+||+|++.|+|+||||+++|++ +|.|+|+|++++.+|||++++++|++.|++..+++.++++.|.+.
T Consensus        44 ~l~~~p~Lk~I~~~~aG~D~id~~~~~~-~i~v~~~~g~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~~~~~~~  116 (303)
T 1qp8_A           44 ELAKMPRLKFIQVVTAGLDHLPWESIPP-HVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRD  116 (303)
T ss_dssp             HHHHCTTCCCEEBSSSCCTTSCCTTSCT-TSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC
T ss_pred             HHHHCCCCCEEEECCCCCCCCCHHHHHC-CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             9960999709989987626036878867-988997899776999999999999999888799999982775434


No 23 
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase family protein; structural genomics, protein structure initiative; 1.80A {Aeromonas salmonicida subsp}
Probab=99.73  E-value=3.4e-18  Score=120.45  Aligned_cols=75  Identities=20%  Similarity=0.258  Sum_probs=69.9

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCC
Q ss_conf             8023889859998165608833367412441364314324355289999999999727799999998599861121
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNF   76 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~   76 (82)
                      +|+++|+||+|++.|+|+|+ |++++.++||.|+|+|++++.+|||++++++|++.|+++.+++.+++|.|.+...
T Consensus        61 ~l~~~~~Lk~I~~~~aG~D~-~~~~~~~~gI~v~n~~g~~a~~VAE~~l~~iL~l~R~~~~~~~~~~~~~W~~~~~  135 (324)
T 3hg7_A           61 LLAKANKLSWFQSTYAGVDV-LLDARCRRDYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPY  135 (324)
T ss_dssp             GGGGCTTCCEEEESSSCCGG-GSCTTSCCSSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCC
T ss_pred             HHHCCCCCEEEEECCEECCC-CHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC
T ss_conf             99349996599988855072-0165887898899689856399999999999998521559999987512455787


No 24 
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.73  E-value=5.5e-18  Score=119.28  Aligned_cols=79  Identities=33%  Similarity=0.516  Sum_probs=72.7

Q ss_pred             CHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf             80238898599981656088333674124413643143243552899999999997277999999985998611214001
Q gi|254780152|r    1 MLSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFNFMGVE   80 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~~~G~E   80 (82)
                      +|+++|+||+|+++++|+||+|+++++++||.|+|+|++++.+|||++++++|++.|++..+++.+++|.|.+.  .|.|
T Consensus        62 ~l~~~~~Lk~I~~~~~G~d~id~~~~~~~~i~v~~~~g~~~~~vaE~~~~~~l~l~r~~~~~~~~~~~g~~~~~--~~~~  139 (313)
T 2ekl_A           62 VIEKGKKLKIIARAGIGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKI--EGLE  139 (313)
T ss_dssp             HHHHCTTCCEEEECSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCC--CCCC
T ss_pred             HHHHCCCCEEEEECCCCCCCCCCHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC--CCCC
T ss_conf             99519897799889816451651015543701563798771999999999999875143778887534885556--7766


Q ss_pred             C
Q ss_conf             7
Q gi|254780152|r   81 A   81 (82)
Q Consensus        81 l   81 (82)
                      |
T Consensus       140 L  140 (313)
T 2ekl_A          140 L  140 (313)
T ss_dssp             C
T ss_pred             C
T ss_conf             7


No 25 
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.72  E-value=8.1e-18  Score=118.35  Aligned_cols=74  Identities=26%  Similarity=0.478  Sum_probs=68.9

Q ss_pred             CHHHCCCCCEEEECCC----CCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf             8023889859998165----60883336741244136431432435528999999999972779999999859986112
Q gi|254780152|r    1 MLSHAKKMKVVGRAGI----GTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN   75 (82)
Q Consensus         1 il~~~~~Lk~I~~~g~----G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~   75 (82)
                      +|+++|+||+|+++|+    |+||||+++|+++||.|+|+|+++ .+|||++++++|++.|++..+++.+++|.|.+..
T Consensus        65 ll~~~p~Lk~I~~~g~~~~~G~d~IDl~~~~~~gI~v~n~~g~~-~avAE~~~~lil~l~r~i~~~~~~~~~g~~~~~~  142 (352)
T 3gg9_A           65 LLDRLPKLKIISQTGRVSRDAGGHIDLEACTDKGVVVLEGKGSP-VAPAELTWALVMAAQRRIPQYVASLKHGAWQQSG  142 (352)
T ss_dssp             HHTTCTTCCEEEESSCCCCSSSCSBCHHHHHHHTCEEECCCCCS-HHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCC
T ss_pred             HHHHCHHCCEEEEECCCCCCCCCCCCHHHHHHCCCEEECCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             99724416504773333676876233999986999998789987-5068999999999865577877774237522245


No 26 
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.71  E-value=7e-18  Score=118.72  Aligned_cols=73  Identities=26%  Similarity=0.332  Sum_probs=66.6

Q ss_pred             HHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf             02388985999816560883336741244136431432435528999999999972779999999859986112
Q gi|254780152|r    2 LSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQIPVANESTHKGKWEKFN   75 (82)
Q Consensus         2 l~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~   75 (82)
                      +..+|+||+|++.|+|+||||+++|++++|. ++.|+.++.+|||++++++|++.|++..+++.+++|.|++..
T Consensus        44 ~~~~~~LK~I~~~~aG~D~ID~~~~~~~~i~-~~~~g~~~~~VAE~~l~~iL~~~R~i~~~~~~~~~~~w~~~~  116 (290)
T 3gvx_A           44 YVLGKRTKMIQAISAGVDHIDVNGIPENVVL-CSNAGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQSP  116 (290)
T ss_dssp             CCCCSSCCEEEECSSCCTTSCGGGSCTTSEE-ECCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC
T ss_pred             HHHCCCCEEEEECCEECCCCCHHHHHHCCEE-EECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
T ss_conf             9518986299989762150049889739989-987997707999999999999982826878887607555666


No 27 
>3kbo_A Glyoxylate/hydroxypyruvate reductase A; NADP, cytoplasm, NAD, structural genomics; HET: NDP NDB EPE; 2.14A {Salmonella enterica subsp}
Probab=99.62  E-value=1.4e-16  Score=111.58  Aligned_cols=74  Identities=16%  Similarity=0.250  Sum_probs=67.8

Q ss_pred             HHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCC------CCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC
Q ss_conf             023889859998165608833367412441364314324------35528999999999972779999999859986112
Q gi|254780152|r    2 LSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGN------SITTAEHAISLMLAIARQIPVANESTHKGKWEKFN   75 (82)
Q Consensus         2 l~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~------~~sVAE~~i~l~L~l~R~~~~~~~~~~~g~W~~~~   75 (82)
                      +.++|+||+|++.++|+||||+++|+++||.++|+|+++      +.+|||++++++|++.|++..+++.++++.|.+..
T Consensus        54 l~~~p~Lk~I~~~~aG~D~id~~~~~~~gi~v~n~p~~~~~~~~~~~~vAE~~l~~~l~l~R~~~~~~~~~~~~~w~~~~  133 (315)
T 3kbo_A           54 MLAGRRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLP  133 (315)
T ss_dssp             HHTTCCCSEEEESSSCCHHHHTTTTTCGGGSCTTSCEECCCCTTHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCC
T ss_pred             HHCCCCCEEEEECCCCCCCCCHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
T ss_conf             74189982999898154502668786678632077755565510399999999999999985908999999828787888


No 28 
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosphate ION, oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.50  E-value=9.2e-15  Score=101.48  Aligned_cols=55  Identities=31%  Similarity=0.442  Sum_probs=51.8

Q ss_pred             HHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             02388985999816560883336741244136431432435528999999999972
Q gi|254780152|r    2 LSHAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIAR   57 (82)
Q Consensus         2 l~~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R   57 (82)
                      |+ +++||+|+++++|+||||+++|+++||.|+|+|++++.+|||++++++|++.|
T Consensus        54 l~-~~~Lk~I~~~~~G~D~ID~~~~~~~gI~v~n~pg~na~aVAE~vl~~~l~~~r  108 (380)
T 2o4c_A           54 LA-GSPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAE  108 (380)
T ss_dssp             HT-TSCCCEEEECSSCSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHH
T ss_pred             HC-CCCCEEEEECCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             75-89985998887222403899998789579957986808999999983335666


No 29 
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.49  E-value=2e-14  Score=99.58  Aligned_cols=55  Identities=33%  Similarity=0.408  Sum_probs=51.1

Q ss_pred             HCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             3889859998165608833367412441364314324355289999999999727
Q gi|254780152|r    4 HAKKMKVVGRAGIGTDNVDLVVASRAGIVVMNTPFGNSITTAEHAISLMLAIARQ   58 (82)
Q Consensus         4 ~~~~Lk~I~~~g~G~d~ID~~~~~~~gI~v~n~~~~~~~sVAE~~i~l~L~l~R~   58 (82)
                      .+++||+|+++|+|+||||+++|+++||.|+|+|++++.+|||+++++++.+.|+
T Consensus        58 ~~~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~~g~~a~aVAe~~l~~~l~~~~~  112 (381)
T 3oet_A           58 SGTPINFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAER  112 (381)
T ss_dssp             TTSCCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCCCCHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             5899849998980245007888960943899567646899999999987899874


No 30 
>1wyz_A Putative S-adenosylmethionine-dependent methytransferase; northeast structural genomics consortium, BTR28; 2.50A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.90.1.1
Probab=23.17  E-value=22  Score=16.60  Aligned_cols=24  Identities=21%  Similarity=0.149  Sum_probs=19.3

Q ss_pred             CHHHHHCCCCEEEECCCCCCCCHH
Q ss_conf             336741244136431432435528
Q gi|254780152|r   22 DLVVASRAGIVVMNTPFGNSITTA   45 (82)
Q Consensus        22 D~~~~~~~gI~v~n~~~~~~~sVA   45 (82)
                      =+.+|.++||.|...||.++.-.|
T Consensus       104 LV~~a~~~~i~V~~iPGpSA~i~A  127 (242)
T 1wyz_A          104 VVAIAQRQKLKVIPLVGPSSIILS  127 (242)
T ss_dssp             HHHHHHHTTCCEEECCCCCHHHHH
T ss_pred             HHHHHHHCCCEEEEECCCCHHHHH
T ss_conf             999999589679985475058789


Done!