254780153
phosphoserine aminotransferase
| GeneID in NCBI database: | 8209130 | Locus tag: | CLIBASIA_00180 |
| Protein GI in NCBI database: | 254780153 | Protein Accession: | YP_003064566.1 |
| Gene range: | -(36130, 37305) | Protein Length: | 391aa |
| Gene description: | phosphoserine aminotransferase | ||
| COG prediction: | none | ||
| KEGG prediction: | phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] | ||
| SEED prediction: | Phosphoserine aminotransferase (EC 2.6.1.52) | ||
| Pathway involved in KEGG: | Methane metabolism [PATH:las00680]
Glycine, serine and threonine metabolism [PATH:las00260] Vitamin B6 metabolism [PATH:las00750] | ||
| Subsystem involved in SEED: | Glycine and Serine Utilization;
Serine Biosynthesis; Pyridoxin (Vitamin B6) Biosynthesis | ||
| sequence | sequence profile | ||
Prediction of Local Sequence Properties
| Source | Summary | Result |
|---|
|
|
Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
No hits with e-value below 0.05
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
| Identity | Alignment graph | Length | Definition | Round | E-value |
| Target | 391 | phosphoserine aminotransferase [Candidatus Liberibacter | |||
| 170785438 | 391 | phosphoserine aminotransferase [Candidatus Liberibacter | 1 | 0.0 | |
| 315122755 | 391 | phosphoserine aminotransferase [Candidatus Liberibacter | 1 | 0.0 | |
| 15966484 | 392 | phosphoserine aminotransferase [Sinorhizobium meliloti | 1 | 1e-149 | |
| 150397817 | 392 | phosphoserine aminotransferase [Sinorhizobium medicae W | 1 | 1e-148 | |
| 241206176 | 392 | phosphoserine aminotransferase [Rhizobium leguminosarum | 1 | 1e-147 | |
| 190893268 | 392 | phosphoserine aminotransferase protein [Rhizobium etli | 1 | 1e-147 | |
| 327193459 | 392 | phosphoserine aminotransferase [Rhizobium etli CNPAF512 | 1 | 1e-146 | |
| 116253701 | 392 | phosphoserine aminotransferase [Rhizobium leguminosarum | 1 | 1e-146 | |
| 306841406 | 391 | phosphoserine aminotransferase [Brucella sp. BO2] Lengt | 1 | 1e-146 | |
| 254719690 | 391 | phosphoserine aminotransferase [Brucella sp. 83/13] Len | 1 | 1e-146 |
| >gi|170785438|gb|ACB37716.1| phosphoserine aminotransferase [Candidatus Liberibacter asiaticus] Length = 391 | Back alignment and organism information |
|---|
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/391 (99%), Positives = 391/391 (100%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV
Sbjct: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF 120
LEVPENYRIA+VPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF
Sbjct: 61 LEVPENYRIAVVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF 120
Query: 121 TAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHID 180
TAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHID
Sbjct: 121 TAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHID 180
Query: 181 FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF 240
FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF
Sbjct: 181 FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF 240
Query: 241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE 300
CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE
Sbjct: 241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE 300
Query: 301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVG 360
TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVG
Sbjct: 301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVG 360
Query: 361 VTVEKEDLLLLCDWLRWVFYFQKISFLRAIS 391
VTVEKEDLLLLCDWLRWVFYFQKISFLRAIS
Sbjct: 361 VTVEKEDLLLLCDWLRWVFYFQKISFLRAIS 391
|
Species: Candidatus Liberibacter asiaticus Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|315122755|ref|YP_004063244.1| phosphoserine aminotransferase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 391 | Back alignment and organism information |
|---|
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/391 (84%), Positives = 353/391 (90%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
M + KP KP RPFFSSGPC KRPGWSL +LEGALLGRSHRC LGKERI +AI LTR+V
Sbjct: 1 MSHICKPKSKPMRPFFSSGPCVKRPGWSLSVLEGALLGRSHRCTLGKERIKRAIDLTREV 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF 120
LEVPE+YRIAIVPASDTGAVEMALWSLLG RGVDVLAWESFGLGWMSDIRQLSLQDVREF
Sbjct: 61 LEVPESYRIAIVPASDTGAVEMALWSLLGSRGVDVLAWESFGLGWMSDIRQLSLQDVREF 120
Query: 121 TAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHID 180
TAPYG L DFSKVDFDRDVVFVWNGTTSGVCVPDV FIPE+REGLVICDATSAVFARHID
Sbjct: 121 TAPYGELSDFSKVDFDRDVVFVWNGTTSGVCVPDVEFIPENREGLVICDATSAVFARHID 180
Query: 181 FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF 240
F KLDV+TFSAQKVLGGEAGFG+IILSP S+ERLE YVPSWPLPKIFRM KGG+VMEGLF
Sbjct: 181 FKKLDVLTFSAQKVLGGEAGFGVIILSPRSIERLENYVPSWPLPKIFRMTKGGKVMEGLF 240
Query: 241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDE 300
GETINTPSLLCIEDYIDAL+W+K+MGGLSA + CN NAAVLFQFI+ENDW+ENLA+D
Sbjct: 241 SGETINTPSLLCIEDYIDALVWVKEMGGLSASITHCNENAAVLFQFIKENDWVENLAIDS 300
Query: 301 TTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVG 360
RSNTSICM+IVDSDI S D N+Q SFCKSM+SFLEKE +AYDI SYRDAP GLRVWVG
Sbjct: 301 KNRSNTSICMRIVDSDIVSFDRNTQASFCKSMVSFLEKESVAYDIASYRDAPFGLRVWVG 360
Query: 361 VTVEKEDLLLLCDWLRWVFYFQKISFLRAIS 391
TVEKEDL+ LCDWL+W FYFQK +FLRAIS
Sbjct: 361 ATVEKEDLVSLCDWLKWAFYFQKSAFLRAIS 391
|
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|15966484|ref|NP_386837.1| phosphoserine aminotransferase [Sinorhizobium meliloti 1021] Length = 392 | Back alignment and organism information |
|---|
Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust.
Identities = 247/392 (63%), Positives = 301/392 (76%), Gaps = 1/392 (0%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
M KP +P FSSGPCAKRPGW+L L A LGRSHR +GK ++ +AI LTR++
Sbjct: 1 MTKPAKPAMRPANTHFSSGPCAKRPGWTLEALSDAPLGRSHRAKIGKTKLKQAIDLTREI 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDI-RQLSLQDVRE 119
LEVP +YRI IVPASDTGAVEMALWSLLG RGVD+LAWESFG GW++D+ +QL L DVR
Sbjct: 61 LEVPADYRIGIVPASDTGAVEMALWSLLGARGVDMLAWESFGAGWVTDVVKQLKLSDVRR 120
Query: 120 FTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHI 179
A YG LPD SKVDFDRDVVF WNGTTSGV VP+ FIP R+GL ICDATSA FA+ +
Sbjct: 121 LEADYGELPDLSKVDFDRDVVFTWNGTTSGVRVPNADFIPADRKGLTICDATSAAFAQAL 180
Query: 180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239
DF KLDVVTFS QKVLGGE G++ILSP +VERLE YVP+WPLPKIFRM KGG+++EG+
Sbjct: 181 DFAKLDVVTFSWQKVLGGEGAHGVLILSPRAVERLETYVPAWPLPKIFRMTKGGKLIEGI 240
Query: 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299
F GETINTPS+LC+EDYIDALLW K +GGL + R +ANA V+ +F+ NDWI NLAV
Sbjct: 241 FTGETINTPSMLCVEDYIDALLWAKSVGGLEGLMARADANAEVIHRFVAANDWIANLAVK 300
Query: 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV 359
TRSNTS+C+KI D+D+++LD ++Q +F K +++ LEKE +A+DIG YRDAP GLR+W
Sbjct: 301 PETRSNTSVCLKIADNDVSALDADAQAAFAKGVVALLEKEGVAFDIGHYRDAPSGLRIWA 360
Query: 360 GVTVEKEDLLLLCDWLRWVFYFQKISFLRAIS 391
G T+E D+ L WL W F QK + +A +
Sbjct: 361 GATIETSDMEALMPWLAWAFETQKATLSQAAA 392
|
Species: Sinorhizobium meliloti Genus: Sinorhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|150397817|ref|YP_001328284.1| phosphoserine aminotransferase [Sinorhizobium medicae WSM419] Length = 392 | Back alignment and organism information |
|---|
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 245/387 (63%), Positives = 298/387 (77%), Gaps = 1/387 (0%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
M KP ++P FSSGPCAKRPGW+L L A LGRSHR +GK ++ +AI LTR++
Sbjct: 1 MTKPAKPAQRPANTHFSSGPCAKRPGWTLEALSDAPLGRSHRAKIGKTKLKQAIDLTREI 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDI-RQLSLQDVRE 119
LEVP +YRI IVPASDTGAVEMALWS+LG RGVD+LAWESFG GW++D+ +QL L DVR
Sbjct: 61 LEVPADYRIGIVPASDTGAVEMALWSMLGARGVDMLAWESFGSGWVTDVVKQLKLADVRR 120
Query: 120 FTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHI 179
A YG LPD S+VDFDRDVVF WNGTTSGV VPD FIP R+GL ICDATSA FA+ +
Sbjct: 121 LEADYGELPDLSRVDFDRDVVFTWNGTTSGVRVPDADFIPSGRKGLTICDATSAAFAQAL 180
Query: 180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239
DF KLDVVTFS QKVLGGE G++ILSP +VERLE YVP+WPLPKIFRM KGG+++EG+
Sbjct: 181 DFAKLDVVTFSWQKVLGGEGAHGVLILSPRAVERLETYVPAWPLPKIFRMTKGGKLIEGI 240
Query: 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299
F GETINTPS+LC+EDYIDALLW K +GGL R +ANA V+ +F+ NDWI NLAV
Sbjct: 241 FTGETINTPSMLCVEDYIDALLWAKSVGGLKGLTARADANAEVIHRFVAANDWIVNLAVK 300
Query: 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV 359
TRSNTS+C++IVD D+++LD ++Q +F K +++ LEKE +A+DIG YRDAP GLR+W
Sbjct: 301 PETRSNTSVCLRIVDGDVSALDADAQGAFAKGVVALLEKEGVAFDIGHYRDAPSGLRIWA 360
Query: 360 GVTVEKEDLLLLCDWLRWVFYFQKISF 386
G T+E D+ L WL W F QK +
Sbjct: 361 GATIETSDMEALMPWLAWAFETQKATL 387
|
Species: Sinorhizobium medicae Genus: Sinorhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|241206176|ref|YP_002977272.1| phosphoserine aminotransferase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 392 | Back alignment and organism information |
|---|
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 245/392 (62%), Positives = 296/392 (75%), Gaps = 1/392 (0%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
M KP +P FSSGPC+KRPGWSL L A LGRSHR +GK ++ +AI LTR++
Sbjct: 1 MAKTAKPDIRPHNTHFSSGPCSKRPGWSLEALSDAALGRSHRAKVGKAKLKQAIDLTREI 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDI-RQLSLQDVRE 119
LEVP +YRI IVPASDTGAVEMALWSLLG RGVD+LAWESFG GW++D+ +QL L+DVR+
Sbjct: 61 LEVPADYRIGIVPASDTGAVEMALWSLLGERGVDMLAWESFGAGWVTDVVKQLKLKDVRK 120
Query: 120 FTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHI 179
A YG LPD S VDFDRDVVF WNGTTSGV VP+ FIP++R+GL ICDATSA FA+ +
Sbjct: 121 LEAGYGELPDLSAVDFDRDVVFTWNGTTSGVRVPNADFIPDNRKGLTICDATSAAFAQEL 180
Query: 180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239
DF KLDVVTFS QKVLGGE G+IILSP +VERL Y P+WPLPKIFRM GG++ EG+
Sbjct: 181 DFAKLDVVTFSWQKVLGGEGAHGVIILSPRAVERLVTYTPAWPLPKIFRMTSGGKLTEGI 240
Query: 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299
F GETINTPS+LC+EDYIDAL+W K++GGL + R +ANA V+ F+ NDWI NLAV
Sbjct: 241 FQGETINTPSMLCVEDYIDALVWAKQLGGLKGLIARADANAKVIHDFVAANDWIANLAVK 300
Query: 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV 359
T SNTS+C+KIVD DIA+LD + Q +F K ++ LEKE +AYD+G YRDAP GLR+W
Sbjct: 301 AETASNTSVCLKIVDKDIAALDDDGQANFAKGLVGLLEKEGVAYDVGHYRDAPSGLRIWA 360
Query: 360 GVTVEKEDLLLLCDWLRWVFYFQKISFLRAIS 391
G T+E D+ L WL W F QK +A +
Sbjct: 361 GATIEASDMQKLMPWLSWAFETQKAQLTQAAA 392
|
Species: Rhizobium leguminosarum Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|190893268|ref|YP_001979810.1| phosphoserine aminotransferase protein [Rhizobium etli CIAT 652] Length = 392 | Back alignment and organism information |
|---|
Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/392 (62%), Positives = 294/392 (75%), Gaps = 1/392 (0%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
M KP +P FSSGPC+KRPGWSL L A LGRSHR +GK ++ +AI LTR++
Sbjct: 1 MAKTAKPDIRPHNTHFSSGPCSKRPGWSLEALSDAALGRSHRAKVGKTKLKQAIDLTREI 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDI-RQLSLQDVRE 119
LEVP +YRI IVPASDTGAVEMALWSLLG RGVD+LAWESFG GW++D+ +QL L+DVR
Sbjct: 61 LEVPADYRIGIVPASDTGAVEMALWSLLGERGVDMLAWESFGAGWVTDVVKQLKLKDVRR 120
Query: 120 FTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHI 179
A YG LPD S VDFDRDVVF WNGTTSGV VP+ FIP R+GL ICDATSA FA+ +
Sbjct: 121 LEAGYGELPDLSTVDFDRDVVFTWNGTTSGVRVPNGDFIPADRKGLTICDATSAAFAQEL 180
Query: 180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239
DF KLDVVTFS QKVLGGE G+IILSP +VERL Y P+WPLPKIFRM GG++ EG+
Sbjct: 181 DFAKLDVVTFSWQKVLGGEGAHGVIILSPRAVERLTTYTPAWPLPKIFRMTSGGKLTEGI 240
Query: 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299
F GETINTPS+LC+EDYIDALLW +++GGL A + R +ANA V+ F+ NDWI NLAV
Sbjct: 241 FQGETINTPSMLCVEDYIDALLWAQELGGLKALIARADANAKVIHDFVAANDWIANLAVK 300
Query: 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV 359
T SNTS+C+KIVD D+A+LD + Q +F K ++ LEKE +AYDIG YRDAP GLR+W
Sbjct: 301 AETASNTSVCLKIVDKDVAALDDDGQAAFAKGLVGLLEKEGVAYDIGHYRDAPSGLRIWA 360
Query: 360 GVTVEKEDLLLLCDWLRWVFYFQKISFLRAIS 391
G T+E D+ L WL W F QK +A +
Sbjct: 361 GATIEASDMQKLMPWLSWAFETQKAQLSQAAA 392
|
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|327193459|gb|EGE60355.1| phosphoserine aminotransferase [Rhizobium etli CNPAF512] Length = 392 | Back alignment and organism information |
|---|
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 246/392 (62%), Positives = 294/392 (75%), Gaps = 1/392 (0%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
M KP +P FSSGPC+KRPGWSL L A LGRSHR +GK ++ +AI LTR++
Sbjct: 1 MAKTAKPDIRPHNTHFSSGPCSKRPGWSLEALSDAALGRSHRAKVGKAKLKQAIDLTREI 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDI-RQLSLQDVRE 119
LEVP +YRI IVPASDTGAVEMALWSLLG RGVD+LAWESFG GW++D+ +QL L+DVR
Sbjct: 61 LEVPADYRIGIVPASDTGAVEMALWSLLGERGVDMLAWESFGAGWVTDVVKQLKLKDVRR 120
Query: 120 FTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHI 179
A YG LPD S +DFDRDVVF WNGTTSGV VP+ FIP R+GL ICDATSA FA+ +
Sbjct: 121 LEAGYGELPDLSAIDFDRDVVFTWNGTTSGVRVPNGDFIPTDRKGLTICDATSAAFAQEL 180
Query: 180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239
DF KLDVVTFS QKVLGGE G+IILSP +VERL Y P+WPLPKIFRM GG++ EG+
Sbjct: 181 DFAKLDVVTFSWQKVLGGEGAHGVIILSPRAVERLVTYTPAWPLPKIFRMTSGGKLTEGI 240
Query: 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299
F GETINTPS+LC+EDYIDALLW K++GGL A + R +ANA V+ F+ NDWI NLAV
Sbjct: 241 FQGETINTPSMLCVEDYIDALLWAKQIGGLKALIARADANAKVIHDFVAANDWIANLAVK 300
Query: 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV 359
T SNTS+C+KIVD DIA+LD + Q +F K ++ LEKE +A+DIG YRDAP GLR+W
Sbjct: 301 AETASNTSVCLKIVDKDIAALDDDGQANFAKGLVGLLEKEGVAHDIGHYRDAPSGLRIWA 360
Query: 360 GVTVEKEDLLLLCDWLRWVFYFQKISFLRAIS 391
G T+E D+ L WL W F QK +A +
Sbjct: 361 GATIEASDMQKLMPWLSWAFETQKAQLSQAAA 392
|
Species: Rhizobium etli Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|116253701|ref|YP_769539.1| phosphoserine aminotransferase [Rhizobium leguminosarum bv. viciae 3841] Length = 392 | Back alignment and organism information |
|---|
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 245/392 (62%), Positives = 295/392 (75%), Gaps = 1/392 (0%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
M KP +P FSSGPC+KRPGWSL L A LGRSHR +GK ++ +AI LTR++
Sbjct: 1 MAKTAKPDIRPHNTHFSSGPCSKRPGWSLEALSDAALGRSHRAKVGKAKLKQAIDLTREI 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDI-RQLSLQDVRE 119
LEVP +YRI IVPASDTGAVEMALWSLLG RGVD+LAWESFG GW++D+ +QL L+DVR+
Sbjct: 61 LEVPADYRIGIVPASDTGAVEMALWSLLGERGVDMLAWESFGAGWVTDVVKQLKLKDVRK 120
Query: 120 FTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHI 179
A YG LPD S VDFDRDVVF WNGTTSGV VP+ FIP++R+GL ICDATSA FA+ +
Sbjct: 121 LEAGYGELPDLSAVDFDRDVVFTWNGTTSGVRVPNADFIPDNRKGLTICDATSAAFAQAL 180
Query: 180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239
DF KLDVVTFS QKVLGGE G+IILSP +VERL Y P+WPLPKIFRM GG++ EG+
Sbjct: 181 DFAKLDVVTFSWQKVLGGEGAHGVIILSPRAVERLVTYTPAWPLPKIFRMTSGGKLTEGI 240
Query: 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299
F GETINTPS+LC+EDYIDAL+W K +GGL + R +ANA V+ F+ NDWI NLAV
Sbjct: 241 FQGETINTPSMLCVEDYIDALVWAKGLGGLKGLIARADANAKVIHDFVAGNDWIANLAVK 300
Query: 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV 359
T SNTS+C+KIVD DIA+LD + Q +F K ++ LEKE +AYD+G YRDAP GLR+W
Sbjct: 301 AETASNTSVCLKIVDKDIAALDDDGQANFAKGLVGLLEKEGVAYDVGHYRDAPSGLRIWA 360
Query: 360 GVTVEKEDLLLLCDWLRWVFYFQKISFLRAIS 391
G T+E D+ L WL W F QK +A +
Sbjct: 361 GATIEASDMQKLMPWLSWAFETQKAQLNQAAA 392
|
Species: Rhizobium leguminosarum Genus: Rhizobium Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|306841406|ref|ZP_07474108.1| phosphoserine aminotransferase [Brucella sp. BO2] Length = 391 | Back alignment and organism information |
|---|
Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/387 (62%), Positives = 298/387 (77%), Gaps = 1/387 (0%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
M + KP +P P FSSGPCAKRPGWSL L A LGRSHR +GK ++ +AI LTR+V
Sbjct: 1 MTTIAKPAVRPANPNFSSGPCAKRPGWSLDALADAPLGRSHRAKIGKNKLKEAIDLTREV 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDI-RQLSLQDVRE 119
L+VP +YRI IVPASDTGAVEMALWS+LG RGVD++AWESFG GW++D+ +QL L+DVR
Sbjct: 61 LQVPADYRIGIVPASDTGAVEMALWSMLGARGVDMVAWESFGSGWVTDVVKQLKLEDVRT 120
Query: 120 FTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHI 179
F APYG + DFSKVDFDRDVVF WNGTTSGV VP+ GFIP R+GL CDATSA FA+ +
Sbjct: 121 FEAPYGEIVDFSKVDFDRDVVFTWNGTTSGVRVPNAGFIPADRKGLTFCDATSAAFAQRL 180
Query: 180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239
DF KLDVVTFS QKVLGGE GI+ILSP +VERLE Y P+WPLPKIFRM KGG+++EG+
Sbjct: 181 DFAKLDVVTFSWQKVLGGEGAHGILILSPRAVERLESYKPAWPLPKIFRMTKGGKLIEGI 240
Query: 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299
F GETINTPS+LC+EDY+DAL W K +GGL A + R + N +VL F+++ WI NLAV
Sbjct: 241 FVGETINTPSMLCVEDYLDALKWAKSLGGLDALIARADRNFSVLNDFVEKTPWIANLAVK 300
Query: 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV 359
TRSNTS+C+ IVD ++ +L ++Q +F K +++ L+KE +AYDIG+YRDAP GLR+W
Sbjct: 301 PETRSNTSVCLTIVDPEVTALSADAQAAFAKGIVTALDKEGVAYDIGAYRDAPSGLRIWA 360
Query: 360 GVTVEKEDLLLLCDWLRWVFYFQKISF 386
G TVE DL L WL W F QK +
Sbjct: 361 GATVEASDLEALTHWLNWAFATQKAAL 387
|
Species: Brucella sp. BO2 Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|254719690|ref|ZP_05181501.1| phosphoserine aminotransferase [Brucella sp. 83/13] Length = 391 | Back alignment and organism information |
|---|
Score = 521 bits (1343), Expect = e-146, Method: Compositional matrix adjust.
Identities = 244/390 (62%), Positives = 298/390 (76%), Gaps = 1/390 (0%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
M + KP +P P FSSGPCAKRPGWSL L A LGRSHR +GK ++ +AI LTR+V
Sbjct: 1 MTTIAKPAVRPANPNFSSGPCAKRPGWSLDALADAPLGRSHRAKIGKNKLKEAIDLTREV 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDI-RQLSLQDVRE 119
L+VP +YRI IVPASDTGAVEMALWS+LG RGVD++AWESFG GW++D+ +QL L+DVR
Sbjct: 61 LQVPADYRIGIVPASDTGAVEMALWSMLGARGVDMVAWESFGSGWVTDVVKQLKLEDVRT 120
Query: 120 FTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHI 179
F APYG + DFSKVDFDRDVVF WNGTTSGV VP+ GFIP R+GL CDATSA FA+ +
Sbjct: 121 FEAPYGEIVDFSKVDFDRDVVFTWNGTTSGVRVPNAGFIPADRKGLTFCDATSAAFAQRL 180
Query: 180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239
DF KLDVVTFS QKVLGGE GI+ILSP +VERLE Y P+WPLPKIFRM KGG+++EG+
Sbjct: 181 DFAKLDVVTFSWQKVLGGEGAHGILILSPRAVERLESYKPAWPLPKIFRMTKGGKLIEGI 240
Query: 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299
F GETINTPS+LC+EDY+DAL W K +GGL A + R + N +VL F+++ WI NLAV
Sbjct: 241 FVGETINTPSMLCVEDYLDALKWAKSLGGLDALIARADRNFSVLNDFVEKTPWIANLAVK 300
Query: 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV 359
TRSNTS+C+ IVD ++ +L + Q +F K +++ L+KE +AYDIG+YRDAP GLR+W
Sbjct: 301 PETRSNTSVCLTIVDPEVTALSADEQAAFAKGIVTALDKEGVAYDIGAYRDAPSGLRIWA 360
Query: 360 GVTVEKEDLLLLCDWLRWVFYFQKISFLRA 389
G TVE DL L WL W F QK + A
Sbjct: 361 GATVEASDLEALTHWLNWAFATQKAALKAA 390
|
Species: Brucella sp. 83/13 Genus: Brucella Family: Brucellaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
| Identity | Alignment graph | Length | Definition | E-value |
| Target | 391 | phosphoserine aminotransferase [Candidatus Liberibacter | ||
| PRK03080 | 378 | PRK03080, PRK03080, phosphoserine aminotransferase; Pro | 1e-173 | |
| TIGR01365 | 374 | TIGR01365, serC_2, phosphoserine aminotransferase, Meth | 1e-153 | |
| COG1932 | 365 | COG1932, SerC, Phosphoserine aminotransferase [Coenzyme | 1e-90 | |
| cd01494 | 170 | cd01494, AAT_I, Aspartate aminotransferase (AAT) superf | 7e-20 | |
| TIGR03301 | 355 | TIGR03301, PhnW-AepZ, 2-aminoethylphosphonate aminotran | 2e-07 | |
| PLN02409 | 401 | PLN02409, PLN02409, serine--glyoxylate aminotransaminas | 0.001 | |
| cd00611 | 355 | cd00611, PSAT_like, Phosphoserine aminotransferase (PSA | 1e-18 | |
| KOG2790 | 370 | KOG2790, KOG2790, KOG2790, Phosphoserine aminotransfera | 3e-17 | |
| TIGR01364 | 349 | TIGR01364, serC_1, phosphoserine aminotransferase | 8e-17 | |
| TIGR01366 | 361 | TIGR01366, serC_3, phosphoserine aminotransferase, puta | 2e-16 | |
| COG0075 | 383 | COG0075, COG0075, Serine-pyruvate aminotransferase/arch | 2e-14 | |
| PRK05355 | 360 | PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreo | 3e-14 | |
| PLN02452 | 365 | PLN02452, PLN02452, phosphoserine transaminase | 1e-09 | |
| PRK12462 | 364 | PRK12462, PRK12462, phosphoserine aminotransferase; Pro | 9e-06 | |
| KOG2862 | 385 | KOG2862, KOG2862, KOG2862, Alanine-glyoxylate aminotran | 2e-04 | |
| cd06451 | 356 | cd06451, AGAT_like, Alanine-glyoxylate aminotransferase | 1e-09 | |
| pfam00266 | 371 | pfam00266, Aminotran_5, Aminotransferase class-V | 8e-08 | |
| COG0520 | 405 | COG0520, CsdB, Selenocysteine lyase [Amino acid transpo | 9e-06 |
| >gnl|CDD|179533 PRK03080, PRK03080, phosphoserine aminotransferase; Provisional | Back alignment and domain information |
|---|
Score = 602 bits (1555), Expect = e-173
Identities = 206/387 (53%), Positives = 253/387 (65%), Gaps = 10/387 (2%)
Query: 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
M + P +P P FSSGPC KRPGW L L ALLGRSHR K + + I+ TR++
Sbjct: 1 MTTLTIPALRPADPRFSSGPCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTREL 60
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDI-RQLSLQDVRE 119
L +PE Y + IVP SDTGA EMALWSLLG R VD LAWESFG W +D+ +QL L+D R
Sbjct: 61 LSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLAWESFGSKWATDVVKQLKLEDPRV 120
Query: 120 FTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHI 179
A YGSLPD S VDFDRDVVF WNGTT+GV VP +I REGL ICDATSA FA +
Sbjct: 121 LEADYGSLPDLSAVDFDRDVVFTWNGTTTGVRVPVARWIGADREGLTICDATSAAFALPL 180
Query: 180 DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239
D++KLDV TFS QKVLGGE G G+ ILSP +VERLE Y P+ P+PK FR+ KGG+ +E
Sbjct: 181 DWSKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENS 240
Query: 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299
F G+TINTPS+L +EDY+D L W +GGL A + R ANA+VL+ + ++ W L D
Sbjct: 241 FKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVAD 300
Query: 300 ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWV 359
TRSNTS+ + VD +Q + + ++ L +E A DI YRDAP GLR+W
Sbjct: 301 PATRSNTSVTLDFVD---------AQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWC 351
Query: 360 GVTVEKEDLLLLCDWLRWVFYFQKISF 386
G TVE D+ L WL W F K +
Sbjct: 352 GPTVEPADVEALTPWLDWAFERLKAAL 378
|
Length = 378 |
| >gnl|CDD|130432 TIGR01365, serC_2, phosphoserine aminotransferase, Methanosarcina type | Back alignment and domain information |
|---|
Score = 537 bits (1384), Expect = e-153
Identities = 231/371 (62%), Positives = 281/371 (75%), Gaps = 1/371 (0%)
Query: 10 KPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRI 69
+P P FSSGPCAKRPGWS+ L+ A LGRSHR LGKE++ +AI+ TR++L VP +Y I
Sbjct: 1 RPANPCFSSGPCAKRPGWSIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLI 60
Query: 70 AIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDI-RQLSLQDVREFTAPYGSLP 128
IVPASDTGAVEMALWS+LG RGVDVLAWESFG GW++D+ +QL L DVR A YG LP
Sbjct: 61 GIVPASDTGAVEMALWSMLGCRGVDVLAWESFGKGWVTDVTKQLKLPDVRVLEAEYGKLP 120
Query: 129 DFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHIDFNKLDVVT 188
D KVDF DVVF WNGTTSGV VP+ FIP REGL ICDATSA FA+ +D++KLDVVT
Sbjct: 121 DLKKVDFKNDVVFTWNGTTSGVRVPNGDFIPADREGLTICDATSAAFAQDLDYHKLDVVT 180
Query: 189 FSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP 248
FS QKVLGGE G++ILSP +V RLE Y P+WPLPKIFR+ KGG++ + +F G TINTP
Sbjct: 181 FSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTP 240
Query: 249 SLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI 308
S+LC+ED++DAL W + +GGL + R + N AVL F+ +N+WI LA RSNTS+
Sbjct: 241 SMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSV 300
Query: 309 CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDL 368
C+K+VD I +LD ++Q F K ++S LEKE +AYDIGSYRDAP GLR+W G TVEK DL
Sbjct: 301 CLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDL 360
Query: 369 LLLCDWLRWVF 379
LC WL W F
Sbjct: 361 ECLCPWLDWAF 371
|
This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri. Length = 374 |
| >gnl|CDD|32115 COG1932, SerC, Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 329 bits (844), Expect = 1e-90
Identities = 121/388 (31%), Positives = 175/388 (45%), Gaps = 43/388 (11%)
Query: 8 TRKPKRPFFSSGPCAKRPG--WSLGILEGALLG-------RSHRCVLGKERINKAIQLTR 58
P+ FS+GP A P G SHR K + +A + R
Sbjct: 1 ASMPRVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLR 60
Query: 59 KVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG---VDVLAWESFGLGWMSDI-RQLSL 114
++L +P++Y++ + TG MA +LLG RG VD AW F + + +Q L
Sbjct: 61 ELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKL 120
Query: 115 QDVREFTAPYGSLPDFSKVDFDRD---VVFVWNGTTSGVCVPDVGFIPESREGLVICDAT 171
D R A YGS+PD SK DF + V F WN T SGV VP++ I +GL++ DA+
Sbjct: 121 IDARIEEAGYGSIPDLSKWDFSDNDAYVHFCWNETISGVEVPELPDIGS--DGLLVADAS 178
Query: 172 SAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231
SA+ +R ID +K DV+ AQK LG AG ++I+ P +ER E Y LP IF +
Sbjct: 179 SAILSRPIDVSKYDVIYAGAQKNLGP-AGLTVVIVRPDLLERAESYT----LPSIFDYLT 233
Query: 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEND 291
G NTP WLK GGL A R A A +L+ +I ++D
Sbjct: 234 H------ADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSD 287
Query: 292 WIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA 351
+ NL RS ++ +VD+++ K ++ E + Y G +
Sbjct: 288 FYRNLVAKA-NRSRMNVTFTLVDAELD-----------KGFVAEAEAAGLIYLKG--HRS 333
Query: 352 PLGLRVWVGVTVEKEDLLLLCDWLRWVF 379
GLR + V ED+ L D++ W
Sbjct: 334 VGGLRASIYNAVPLEDVEALTDFMDWFE 361
|
Length = 365 |
| >gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes | Back alignment and domain information |
|---|
Score = 93.6 bits (233), Expect = 7e-20
Identities = 52/171 (30%), Positives = 71/171 (41%), Gaps = 16/171 (9%)
Query: 50 INKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGY-RGVDVLAWESFGLGWMSD 108
+ + + ++L+ P N + VP S TGA E AL +LLG V V A W++
Sbjct: 2 LEELEEKLARLLQ-PGNDKAVFVP-SGTGANEAALLALLGPGDEVIVDANGHGSRYWVAA 59
Query: 109 IR-QLSLQDVREFTAPYG-----SLPDFSKVDFDRDVVFVWNGTTSGVCVPD--VGFIPE 160
V A YG L + +V N T+ GV VP + I +
Sbjct: 60 ELAGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAK 119
Query: 161 SREGLVICDATSAVFAR-----HIDFNKLDVVTFSAQKVLGGEAGFGIIIL 206
L++ DA SA A I DVVTFS K LGGE G +I+
Sbjct: 120 EYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKNLGGEGGGVVIVK 170
|
PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V).. Length = 170 |
| >gnl|CDD|132344 TIGR03301, PhnW-AepZ, 2-aminoethylphosphonate aminotransferase | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 74 ASDTGAVEMALWSLLGYRG-VDVLAWESFG--LGWMSDIRQLSLQDVREFTAPYGSLPDF 130
S T AVE + SL+ G + VL ++G L + + + D+ + Y PD
Sbjct: 57 GSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLN--FSEY-EPPDL 113
Query: 131 SKV--------DFDRDVVFVWNGTTSGVCVP--DVGFIPESREGLVICDATSAVFARHID 180
+++ D V V + TT+G+ P + + S ++I DA S+ A ID
Sbjct: 114 NRIEEALAADPDI-THVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID 172
Query: 181 FNKLDV--VTFSAQKVLGGEAGFGIIILSPASVE 212
+LDV + SA K L G GFG +I +E
Sbjct: 173 IEELDVDALIASANKCLEGVPGFGFVIARRDLLE 206
|
This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different. Length = 355 |
| >gnl|CDD|178031 PLN02409, PLN02409, serine--glyoxylate aminotransaminase | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 71 IVPASDTGAVEMALWSLL--GYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLP 128
I P + TGA E AL + L G + V + F L W+ +++L+ DV +P+G
Sbjct: 64 IFPTTGTGAWESALTNTLSPGDKVVSFRIGQ-FSLLWIDQMQRLNF-DVDVVESPWGQGA 121
Query: 129 DF----SKVDFDRD-----VVFVWNGTTSGVC--VPDVGFIPESRE--GLVICDATSAVF 175
D SK+ D + V V N T++GV + V + + + L++ D S++
Sbjct: 122 DLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIG 181
Query: 176 ARHIDFN----KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEK 216
A +DF +DV +QK L G GI+ SP ++E +
Sbjct: 182 A--LDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKT 224
|
Length = 401 |
| >gnl|CDD|99736 cd00611, PSAT_like, Phosphoserine aminotransferase (PSAT) family | Back alignment and domain information |
|---|
Score = 89.7 bits (223), Expect = 1e-18
Identities = 81/335 (24%), Positives = 135/335 (40%), Gaps = 65/335 (19%)
Query: 16 FSSGPCAKRP---------------GWSLGILEGALLGRSHRCVLGKERINKAIQLTRKV 60
FS+GP A P G + ++E SHR + +N+A R++
Sbjct: 3 FSAGP-AALPEEVLEQAQKELLDFNGLGMSVME-----MSHRSKDFEAIVNEAESDLREL 56
Query: 61 LEVPENYRIAIVPASDTGAVEMALWSLLGYRG----VDVLAW------ESFGLGWMSDIR 110
L +P+NY++ + TG +LLG +G V AW E+ G + I
Sbjct: 57 LNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIV 116
Query: 111 QLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVW---NGTTSGVCVPDVGFIPESREGLVI 167
+ Y +PD D D +V N T GV +V P++ ++
Sbjct: 117 AAKEEG------KYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFDEV---PDTGGVPLV 167
Query: 168 CDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIF 227
D +S + +R ID +K V+ AQK L G AG ++I+ + + K PS +
Sbjct: 168 ADMSSNILSRPIDVSKFGVIYAGAQKNL-GPAGVTVVIVRKDLLGKARKITPS-----ML 221
Query: 228 R---MVKGGRVMEGLFCGETINTPSLLCIEDYIDALL--WLKKMGGLSACVERCNANAAV 282
L+ NTP I Y+ L+ WLK+ GG+ A +R A +
Sbjct: 222 NYKTHADNN----SLY-----NTPPTFAI--YMMGLVLKWLKEQGGVEAMEKRNRQKAQL 270
Query: 283 LFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI 317
L+ I ++ VD+ RS ++ ++ ++
Sbjct: 271 LYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEEL 305
|
This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.. Length = 355 |
| >gnl|CDD|38001 KOG2790, KOG2790, KOG2790, Phosphoserine aminotransferase [Coenzyme transport and metabolism, Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 85.0 bits (210), Expect = 3e-17
Identities = 76/336 (22%), Positives = 140/336 (41%), Gaps = 48/336 (14%)
Query: 11 PKRPF-FSSGPCAKRP---------------GWSLGILEGALLGRSHRCVLGKERINKAI 54
P+R F++GP AK P G + ++E SHR + IN
Sbjct: 5 PERVVNFAAGP-AKLPESVLLEAQKDLLNFNGSGISVME-----MSHRSKDFAKIINDTE 58
Query: 55 QLTRKVLEVPENYRIAIVPASDTG---AVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQ 111
L R++L +P+NY++ + TG AV + L L R D + S+ + ++
Sbjct: 59 SLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKK 118
Query: 112 LS-----LQDVREFTAPYGSLPDFSKVDFDRDVVFVW---NGTTSGVCVPDVGFIPESRE 163
+ ++ +T YG +PD S + + D +V+ N T GV + + + +
Sbjct: 119 YGTPNIVIPKLKSYT--YGKVPDPSTWELNPDASYVYYCANETVHGVEFDFIP-VNDPKG 175
Query: 164 GLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL 223
+++ D +S +R +D +K V+ AQK + G AG ++I+ + PS
Sbjct: 176 AVLVADMSSNFLSRPVDVSKFGVIFAGAQKNV-GPAGVTVVIVRKDLLGNALDITPSVLD 234
Query: 224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVL 283
KI M K + NTP I W+ + GGL+A + + +L
Sbjct: 235 YKI--MDKNNSLY---------NTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLL 283
Query: 284 FQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS 319
+ I ++ V+ + RS ++ +I ++ +
Sbjct: 284 YDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEA 319
|
Length = 370 |
| >gnl|CDD|130431 TIGR01364, serC_1, phosphoserine aminotransferase | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 8e-17
Identities = 65/289 (22%), Positives = 118/289 (40%), Gaps = 33/289 (11%)
Query: 40 SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV-DVL-- 96
SHR + N+A R++L +P+NY + + TG +LL V D +
Sbjct: 29 SHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVT 88
Query: 97 -AWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVW---NGTTSGVCV 152
AW +++ + Y +PD S + D +V N T GV
Sbjct: 89 GAWSKKAAKEAKKYGVVNVVASGK-EGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEF 147
Query: 153 PDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVE 212
+ +P+ + ++ D +S + +R ID +K ++ AQK + G AG ++I+ +
Sbjct: 148 RE---LPDVKNAPLVADMSSNILSRPIDVSKFGLIYAGAQKNI-GPAGLTVVIVRKDLLG 203
Query: 213 RLEKYVPSWPLPKIFR---MVKGGRVMEGLFCGETINTPSLLCIEDYIDALL--WLKKMG 267
R + P + + ++ NTP I Y+ L+ WLK+ G
Sbjct: 204 RASR-----ITPSMLNYKIHAEND----SMY-----NTPPTFAI--YVSGLVFKWLKEQG 247
Query: 268 GLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316
G+ A +R A A +L+ I ++ VD RS ++ + + +
Sbjct: 248 GVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEE 296
|
This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266). Length = 349 |
| >gnl|CDD|130433 TIGR01366, serC_3, phosphoserine aminotransferase, putative | Back alignment and domain information |
|---|
Score = 81.9 bits (202), Expect = 2e-16
Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 21/316 (6%)
Query: 10 KPKRPFFSSGPCAKRPGWSLGILEG--ALLGRSHRCVLGKERINKAIQLTRKVLEVPENY 67
KP+ F SGP R + +L G SHR K + + + ++ +P+ Y
Sbjct: 1 KPRDGRFGSGPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGY 60
Query: 68 RIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF-TAPYGS 126
+ + T + A + L+ + + L++ F + ++ TA GS
Sbjct: 61 EVILGNGGATAFWDAATFGLIEKKSLH-LSFGEFSSKFAKAVKLAPWLGEPIIVTADPGS 119
Query: 127 LPD---FSKVDFDRDVVFVW--NGTTSGVCVPDVGFIPESREGLVICDATSAVFARHIDF 181
P+ VD V W N T++GV VP V S + LV+ DATS +D
Sbjct: 120 APEPQADPGVD-----VIAWAHNETSTGVAVP-VRRPEGSDDALVVIDATSGAGGLPVDI 173
Query: 182 NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPS--WPLPKIFRMVKGGRVMEGL 239
+ DV F+ QK + G + I+SPA++ER+E S W +P+ + ++
Sbjct: 174 AETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRW-VPEFLSLPTA---VDNS 229
Query: 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVD 299
+T NTP++ + + + W+ GGL V R +++ L+ + QE + D
Sbjct: 230 LKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTD 289
Query: 300 ETTRSNTSICMKIVDS 315
RS + VD
Sbjct: 290 PGKRSQVVGTIDFVDD 305
|
This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria. Length = 361 |
| >gnl|CDD|30424 COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 2e-14
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 26/287 (9%)
Query: 40 SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99
HR + + ++ RKV EN + ++ S T A+E A+ SL+ G VL
Sbjct: 30 GHRSPDFVGIMKEVLEKLRKVFGT-ENGDVVLLSGSGTLAMEAAVASLVE-PGDKVLVVV 87
Query: 100 S--FGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD--FDRD-----VVFVWNGTTSGV 150
+ FG + ++I + +V +G D +V+ D+D V V N T++GV
Sbjct: 88 NGKFGERF-AEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGV 146
Query: 151 C--VPDVGFIPESREGLVICDATSAVFARHIDFNKL--DVVTFSAQKVLGGEAGFGIIIL 206
+ ++ + L+I DA S++ + ++ DV +QK LG G + +
Sbjct: 147 LNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAV 206
Query: 207 SPASVERLEKY-VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKK 265
S ++E +E+ PS+ + K + ME G T TP + I +AL + +
Sbjct: 207 SERALEAIEERKHPSF----YLDLKKWLKYMEKK--GSTPYTPPVNLIYALREALDLILE 260
Query: 266 MGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI 312
GL A + R A L ++ L D RS T +K+
Sbjct: 261 E-GLEARIARHRRLAEALRAGLEALGL--ELFADPERRSPTVTAIKV 304
|
Length = 383 |
| >gnl|CDD|180036 PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional | Back alignment and domain information |
|---|
Score = 74.8 bits (185), Expect = 3e-14
Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 96/320 (30%)
Query: 40 SHRCVLGKE---RINKAIQLTRKVLEVPENYRI-----------AIVP---ASDTGAVEM 82
SHR KE +A R++L +P+NY++ A+VP +
Sbjct: 40 SHR---SKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADY 96
Query: 83 AL---WS--------LLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFS 131
WS G V+V A S +D + +P
Sbjct: 97 VDTGSWSKKAIKEAKKYG--EVNVAA---------------SSED-----DGFTYIPPLD 134
Query: 132 KVDFDRDVVFV---WNGTTSGV---CVPDVGFIPESREGLVICDATSAVFARHIDFNKLD 185
+ D +V N T G +PD G +P ++ D +S + +R ID +K
Sbjct: 135 EWQLSDDAAYVHYTSNETIDGTEFHELPDTGDVP------LVADMSSDILSRPIDVSKFG 188
Query: 186 VVTFSAQKVLGGEAGFGIIILSPASVER---LEKYVPSWPLPKIFR---MVKGGRVMEGL 239
++ AQK + G AG I+I+ R L + +PS +P + +
Sbjct: 189 LIYAGAQKNI-GPAGLTIVIV------REDLLGRALPS--IPSMLDYKTHADND----SM 235
Query: 240 FCGETINTPSLLCIEDYIDALL---WLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296
+ NTP I Y+ A L WLK+ GG++A +R AA+L+ I +D+ N
Sbjct: 236 Y-----NTPPTFAI--YL-AGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRN- 286
Query: 297 AVDETTRSNTSICMKIVDSD 316
V RS ++ + D +
Sbjct: 287 PVAPEDRSRMNVPFTLADEE 306
|
Length = 360 |
| >gnl|CDD|178071 PLN02452, PLN02452, phosphoserine transaminase | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 74/349 (21%), Positives = 126/349 (36%), Gaps = 94/349 (26%)
Query: 16 FSSGP--------------CAKRPGWSLGILEGALLGRSHRCVLGKER---INKAIQLTR 58
FS+GP G + ++E SHR GKE I KA R
Sbjct: 11 FSAGPATLPANVLAKAQAELYNWEGSGMSVME-----MSHR---GKEFLSIIQKAEADLR 62
Query: 59 KVLEVPENYRI-----------AIVPASDTGAVEMALWSLLGYRGVDVLAW--ESFG--- 102
++L++P+NY + A +P + + A + + G +W ++
Sbjct: 63 ELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTG-------SWSKKAAKEAK 115
Query: 103 ------LGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVW---NGTTSGV--- 150
+ Y +P S+ + D FV N T GV
Sbjct: 116 KYCKTNVIASGK------------DEKYTKIPSVSEWELTPDAKFVHICANETIHGVEFK 163
Query: 151 CVPDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPAS 210
PDVG ++ D +S ++ +D +K V+ AQK + G +G I+I+
Sbjct: 164 DYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIYAGAQKNV-GPSGVTIVIIRKDL 216
Query: 211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALL--WLKKMGG 268
+ P KI + + NTP I Y+ L+ L GG
Sbjct: 217 IGNARPITPGMLDYKI--HAENDSLY---------NTPPCFGI--YMCGLVFEDLLAQGG 263
Query: 269 LSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI 317
L A +R A +L+ I E++ V+++ RS ++ + S++
Sbjct: 264 LKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSEL 312
|
Length = 365 |
| >gnl|CDD|183540 PRK12462, PRK12462, phosphoserine aminotransferase; Provisional | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 9e-06
Identities = 65/273 (23%), Positives = 110/273 (40%), Gaps = 39/273 (14%)
Query: 35 ALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVD 94
++LG SHR + +A R +L +P+ Y + + + M + R
Sbjct: 36 SVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFS--RPGA 93
Query: 95 VLAWESFGLGWMSDIRQLSLQDVREFTAP----------YGSLPDFSKVDFDRDVVF--- 141
E G+ S + ++ + A Y +LP +++D+D F
Sbjct: 94 AAP-EYVTTGYWS---RKAIGEASRVAAMRVVWDGAASGYRTLPSLAELDWDARAPFRHY 149
Query: 142 VWNGTTSGVCVPDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGF 201
V N T G+ PD +P+S I D +S +R D +V AQK L G AG
Sbjct: 150 VSNETVEGLQFPDAAGLPDSPL---IADMSSDFMSRPFDVEAYGMVYAHAQKNL-GPAGV 205
Query: 202 GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALL 261
+ I+ A +ER+ +P FR R NTP + I Y+ AL+
Sbjct: 206 TVAIIRRALLERVPDTLPPM---LDFRTHVEHR--------SNYNTPPVFAI--YVMALV 252
Query: 262 --WLK-KMGGLSACVERCNANAAVLFQFIQEND 291
W++ ++GG+ A + AA+L+ + +
Sbjct: 253 LRWIRDEIGGVHAMRDINARKAAMLYATLDALN 285
|
Length = 364 |
| >gnl|CDD|38073 KOG2862, KOG2862, KOG2862, Alanine-glyoxylate aminotransferase AGT1 [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 2e-04
Identities = 70/325 (21%), Positives = 120/325 (36%), Gaps = 25/325 (7%)
Query: 4 MRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLG-RSHRCVLGKERINKAIQLTRKVLE 62
+ P P R GP + G + LG S V + + + I+ K
Sbjct: 9 LLDPMYVPVRTLLGPGP-SNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTA- 66
Query: 63 VPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES--FGLGWMSDIRQLSLQDVREF 120
N + ++ S E AL +LL G +VL + +G R+ + V
Sbjct: 67 ---NAQTFVISGSGHSGWEAALVNLL-EPGDNVLVVSTGTWGQRAADCARRYGAE-VDVV 121
Query: 121 TAPYG---SLPDFSK--VDFDRDVVFVWNGTTS-GVCVPDV---GFIPESREGLVICDAT 171
A G L + ++ VFV +G +S GV + G + E L++ D
Sbjct: 122 EADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTV 181
Query: 172 SAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229
+++ + + +DV +QK LG AG II S ++E + + P+ F +
Sbjct: 182 ASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDR-KTKPVSFYFDI 240
Query: 230 VKGGR-VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288
++ G +TP + + + A L L GL R + L +
Sbjct: 241 LRLGNFWGCDGEPRAYHHTPPVQLLYS-LRAALALIAEEGLENSWRRHREMSKWLKLSL- 298
Query: 289 ENDWIENLAVDETTRSNTSICMKIV 313
E ++ VDE R T +K+
Sbjct: 299 EALGLQLFVVDEELRLPTVTTVKVP 323
|
Length = 385 |
| >gnl|CDD|99744 cd06451, AGAT_like, Alanine-glyoxylate aminotransferase (AGAT) family | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 66/273 (24%), Positives = 103/273 (37%), Gaps = 27/273 (9%)
Query: 49 RINKAIQ-LTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG--VDVLAWESFGLGW 105
+ I R V + EN ++ S TGA+E AL +LL G V V FG W
Sbjct: 32 ALMDEILEGLRYVFQ-TENGLTFLLSGSGTGAMEAALSNLLE-PGDKVLVGVNGVFGDRW 89
Query: 106 MSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTS-GVCVPDVGFIP 159
+ DV P+G ++ D V + + TS GV P G
Sbjct: 90 ADMAERYGA-DVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGA 148
Query: 160 ESRE--GLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLE 215
+++ L+I DA S++ ++ +DV +QK LG G G I S ++ER++
Sbjct: 149 LAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIK 208
Query: 216 KY--VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACV 273
K + + ++K EG T L + + +D +L GL
Sbjct: 209 KKTKPKGFYF-DLLLLLKY--WGEGYSYPHTPPVNLLYALREALDLIL----EEGLENRW 261
Query: 274 ERCNANAAVLFQFIQENDWIENLAVDETTRSNT 306
R A L + ++ L RS T
Sbjct: 262 ARHRRLAKALREGLEA--LGLKLLAKPELRSPT 292
|
This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.. Length = 356 |
| >gnl|CDD|144011 pfam00266, Aminotran_5, Aminotransferase class-V | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 8e-08
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 13/190 (6%)
Query: 139 VVFVWNGTTSGVC--VPDVGFIPESREGLVICDATSAVFARHIDFNKL--DVVTFSAQKV 194
V +G V ++G + LV+ DA AV R ID L D + FS K+
Sbjct: 143 VAITHVSNVTGTVNPVEEIGKLAHEYGALVVVDAAQAVGHRPIDVQALGVDFLAFSGHKL 202
Query: 195 LGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG--LFCGETINTPSLLC 252
G G G++ +E+L + + + +++ + F T N ++
Sbjct: 203 Y-GPTGIGVLYGRRDLLEKLPPWKGGGGMIDLVSLLQETTFADAPSKFEAGTPNIAGIIG 261
Query: 253 IEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL-AVDETTRSNTSICMK 311
+ +D +L ++ GL A + AA L++ + I + AV E S S
Sbjct: 262 LGAALD---YLAEI-GLEAIEKHERELAAYLYERLLAIPGIRLVPAVAERRPSIISFNFP 317
Query: 312 IVDS-DIASL 320
V D+A+L
Sbjct: 318 GVHPHDVATL 327
|
This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. Length = 371 |
| >gnl|CDD|30866 COG0520, CsdB, Selenocysteine lyase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 9e-06
Identities = 46/252 (18%), Positives = 87/252 (34%), Gaps = 31/252 (12%)
Query: 139 VVFVWNGTTSGVCVP--DVGFIPESREGLVICDATSAVFARHIDFNKL--DVVTFSAQKV 194
V +G P ++ + LV+ DA A ID +L D + FS K
Sbjct: 166 VALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKW 225
Query: 195 LGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGE--TINTPSLLC 252
L G G G++ + +E LE ++ + + +G + E E T N +
Sbjct: 226 LLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIG 285
Query: 253 IEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI 312
+ AL +L ++ G+ A L + + E +E + R
Sbjct: 286 LA---AALDYLLEI-GMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADR--------- 332
Query: 313 VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIG--------SYRDAPLGLRVWVGVTVE 364
+ N + + + L+++ IA G +R + +
Sbjct: 333 ----GGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNT 388
Query: 365 KEDLLLLCDWLR 376
+ED+ L + L+
Sbjct: 389 EEDVDRLLEALK 400
|
Length = 405 |
Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
| Identity | Alignment graph | Length | Definition | Probability |
| Target | 391 | phosphoserine aminotransferase [Candidatus Liberibacter | ||
| PRK03080 | 381 | phosphoserine aminotransferase; Provisional | 100.0 | |
| TIGR01364 | 391 | serC_1 phosphoserine aminotransferase; InterPro: IPR003 | 100.0 | |
| cd00611 | 355 | PSAT_like Phosphoserine aminotransferase (PSAT) family. | 100.0 | |
| PRK05355 | 360 | phosphoserine aminotransferase; Provisional | 100.0 | |
| TIGR03301 | 355 | PhnW-AepZ 2-aminoethylphosphonate aminotransferase. Thi | 100.0 | |
| PRK12462 | 364 | phosphoserine aminotransferase; Provisional | 100.0 | |
| COG1932 | 365 | SerC Phosphoserine aminotransferase [Coenzyme metabolis | 100.0 | |
| COG0075 | 383 | Serine-pyruvate aminotransferase/archaeal aspartate ami | 100.0 | |
| PRK13479 | 368 | 2-aminoethylphosphonate--pyruvate transaminase; Provisi | 100.0 | |
| cd06451 | 356 | AGAT_like Alanine-glyoxylate aminotransferase (AGAT) fa | 100.0 | |
| KOG2862 | 385 | consensus | 100.0 | |
| KOG2790 | 370 | consensus | 100.0 | |
| TIGR01365 | 379 | serC_2 phosphoserine aminotransferase; InterPro: IPR006 | 100.0 | |
| TIGR02326 | 366 | transamin_PhnW 2-aminoethylphosphonate--pyruvate transa | 100.0 | |
| TIGR01366 | 362 | serC_3 phosphoserine aminotransferase, putative; InterP | 100.0 | |
| TIGR01979 | 409 | sufS cysteine desulfurases, SufS subfamily; InterPro: I | 100.0 | |
| pfam00266 | 371 | Aminotran_5 Aminotransferase class-V. This domain is fo | 100.0 | |
| PRK09295 | 406 | selenocysteine lyase; Validated | 100.0 | |
| PRK10874 | 401 | cysteine sulfinate desulfinase; Provisional | 100.0 | |
| TIGR03392 | 398 | FeS_syn_CsdA cysteine desulfurase, catalytic subunit Cs | 100.0 | |
| COG0520 | 405 | csdA Selenocysteine lyase/Cysteine desulfurase [Posttra | 100.0 | |
| cd06453 | 373 | SufS_like Cysteine desulfurase (SufS)-like. This family | 100.0 | |
| TIGR01977 | 384 | am_tr_V_EF2568 cysteine desulfurase family protein; Int | 99.97 | |
| PRK02948 | 381 | cysteine desulfurase; Provisional | 99.97 | |
| TIGR03402 | 379 | FeS_nifS cysteine desulfurase NifS. Members of this pro | 99.97 | |
| TIGR03403 | 382 | nifS_epsilon cysteine desulfurase, NifS family, epsilon | 99.96 | |
| COG1104 | 386 | NifS Cysteine sulfinate desulfinase/cysteine desulfuras | 99.92 | |
| KOG1549 | 428 | consensus | 99.8 | |
| TIGR01976 | 410 | am_tr_V_VC1184 cysteine desulfurase family protein; Int | 99.78 | |
| cd06454 | 349 | KBL_like KBL_like; this family belongs to the pyridoxal | 99.64 | |
| PRK05958 | 387 | 8-amino-7-oxononanoate synthase; Reviewed | 99.6 | |
| PRK10534 | 333 | L-threonine aldolase; Provisional | 99.53 | |
| cd06502 | 338 | TA_like Low-specificity threonine aldolase (TA). This f | 99.53 | |
| PRK13520 | 375 | L-tyrosine decarboxylase; Provisional | 99.52 | |
| PRK06225 | 375 | aspartate aminotransferase; Provisional | 99.51 | |
| pfam00155 | 351 | Aminotran_1_2 Aminotransferase class I and II. | 99.5 | |
| PRK06939 | 395 | 2-amino-3-ketobutyrate coenzyme A ligase; Provisional | 99.49 | |
| PRK07179 | 408 | hypothetical protein; Provisional | 99.49 | |
| PRK04870 | 356 | histidinol-phosphate aminotransferase; Provisional | 99.48 | |
| cd06450 | 345 | DOPA_deC_like DOPA decarboxylase family. This family be | 99.48 | |
| PRK13393 | 404 | 5-aminolevulinate synthase; Provisional | 99.48 | |
| PRK00950 | 369 | histidinol-phosphate aminotransferase; Validated | 99.45 | |
| TIGR00858 | 378 | bioF 8-amino-7-oxononanoate synthase; InterPro: IPR0047 | 99.44 | |
| PRK09064 | 406 | 5-aminolevulinate synthase; Validated | 99.43 | |
| PRK05937 | 370 | 8-amino-7-oxononanoate synthase; Provisional | 99.43 | |
| PRK07310 | 395 | consensus | 99.43 | |
| PRK13392 | 410 | 5-aminolevulinate synthase; Provisional | 99.42 | |
| PRK02731 | 367 | histidinol-phosphate aminotransferase; Validated | 99.41 | |
| PRK09105 | 374 | putative aminotransferase; Provisional | 99.4 | |
| PRK06207 | 406 | aspartate aminotransferase; Provisional | 99.39 | |
| PRK05387 | 353 | histidinol-phosphate aminotransferase; Provisional | 99.38 | |
| PRK05764 | 389 | aspartate aminotransferase; Provisional | 99.37 | |
| PRK07505 | 405 | hypothetical protein; Provisional | 99.37 | |
| PRK03566 | 365 | consensus | 99.37 | |
| PRK08153 | 370 | histidinol-phosphate aminotransferase; Provisional | 99.36 | |
| PRK05957 | 389 | aspartate aminotransferase; Provisional | 99.33 | |
| PRK01533 | 366 | histidinol-phosphate aminotransferase; Validated | 99.33 | |
| PRK06507 | 400 | consensus | 99.33 | |
| PRK08362 | 389 | consensus | 99.32 | |
| PRK07678 | 451 | aminotransferase; Validated | 99.32 | |
| PRK00011 | 415 | glyA serine hydroxymethyltransferase; Reviewed | 99.32 | |
| PRK06107 | 402 | aspartate aminotransferase; Provisional | 99.32 | |
| PRK06917 | 447 | hypothetical protein; Provisional | 99.3 | |
| PRK03244 | 398 | argD acetylornithine aminotransferase; Provisional | 99.3 | |
| PRK07212 | 378 | consensus | 99.3 | |
| PRK07543 | 400 | consensus | 99.29 | |
| cd00610 | 413 | OAT_like Acetyl ornithine aminotransferase family. This | 99.29 | |
| PRK07481 | 448 | hypothetical protein; Provisional | 99.29 | |
| PRK07482 | 461 | hypothetical protein; Provisional | 99.29 | |
| PRK08361 | 390 | aspartate aminotransferase; Provisional | 99.28 | |
| PRK05965 | 459 | hypothetical protein; Provisional | 99.28 | |
| PRK07036 | 466 | hypothetical protein; Provisional | 99.28 | |
| PRK06056 | 402 | consensus | 99.28 | |
| PRK07682 | 378 | hypothetical protein; Validated | 99.27 | |
| PRK08069 | 390 | consensus | 99.27 | |
| PRK05166 | 374 | histidinol-phosphate aminotransferase; Provisional | 99.26 | |
| PRK08593 | 448 | 4-aminobutyrate aminotransferase; Provisional | 99.26 | |
| PRK06148 | 1015 | hypothetical protein; Provisional | 99.25 | |
| pfam00464 | 380 | SHMT Serine hydroxymethyltransferase. | 99.25 | |
| PRK06105 | 460 | aminotransferase; Provisional | 99.25 | |
| PRK03321 | 352 | putative aminotransferase; Provisional | 99.24 | |
| PRK05942 | 394 | aspartate aminotransferase; Provisional | 99.24 | |
| PRK06375 | 381 | consensus | 99.24 | |
| PRK07683 | 387 | aminotransferase A; Validated | 99.24 | |
| PRK11522 | 468 | putrescine--2-oxoglutarate aminotransferase; Provisiona | 99.23 | |
| PRK06173 | 429 | adenosylmethionine--8-amino-7-oxononanoate transaminase | 99.23 | |
| PRK08068 | 389 | transaminase; Reviewed | 99.23 | |
| PRK07030 | 467 | adenosylmethionine--8-amino-7-oxononanoate transaminase | 99.23 | |
| PRK12381 | 406 | bifunctional succinylornithine transaminase/acetylornit | 99.23 | |
| PRK06938 | 464 | diaminobutyrate--2-oxoglutarate aminotransferase; Provi | 99.23 | |
| PRK06108 | 382 | aspartate aminotransferase; Provisional | 99.22 | |
| PRK05794 | 397 | consensus | 99.22 | |
| TIGR03540 | 383 | DapC_direct LL-diaminopimelate aminotransferase. This c | 99.22 | |
| PRK07550 | 387 | hypothetical protein; Provisional | 99.21 | |
| PRK02627 | 398 | acetylornithine aminotransferase; Provisional | 99.21 | |
| PRK07908 | 346 | hypothetical protein; Provisional | 99.21 | |
| PRK06575 | 399 | consensus | 99.21 | |
| PRK04152 | 364 | consensus | 99.2 | |
| PRK05964 | 421 | adenosylmethionine--8-amino-7-oxononanoate transaminase | 99.2 | |
| PRK08117 | 429 | 4-aminobutyrate aminotransferase; Provisional | 99.2 | |
| PRK08360 | 443 | 4-aminobutyrate aminotransferase; Provisional | 99.2 | |
| PRK06348 | 383 | aspartate aminotransferase; Provisional | 99.19 | |
| PRK06916 | 462 | adenosylmethionine--8-amino-7-oxononanoate transaminase | 99.19 | |
| PRK09044 | 418 | consensus | 99.19 | |
| PRK06943 | 452 | adenosylmethionine--8-amino-7-oxononanoate transaminase | 99.19 | |
| PRK02610 | 369 | histidinol-phosphate aminotransferase; Provisional | 99.18 | |
| PRK09148 | 406 | aminotransferase; Validated | 99.18 | |
| COG0079 | 356 | HisC Histidinol-phosphate/aromatic aminotransferase and | 99.18 | |
| PRK08443 | 388 | consensus | 99.17 | |
| PRK03158 | 359 | histidinol-phosphate aminotransferase; Provisional | 99.17 | |
| PRK06082 | 460 | 4-aminobutyrate aminotransferase; Provisional | 99.17 | |
| PRK07367 | 385 | consensus | 99.17 | |
| PRK06290 | 411 | aspartate aminotransferase; Provisional | 99.17 | |
| PRK07046 | 452 | aminotransferase; Validated | 99.16 | |
| PRK08912 | 387 | hypothetical protein; Provisional | 99.16 | |
| PRK07483 | 443 | hypothetical protein; Provisional | 99.16 | |
| PRK06541 | 460 | hypothetical protein; Provisional | 99.16 | |
| PRK04612 | 408 | argD bifunctional N-succinyldiaminopimelate-aminotransf | 99.15 | |
| PRK09276 | 385 | aspartate aminotransferase; Provisional | 99.15 | |
| PRK07986 | 428 | adenosylmethionine--8-amino-7-oxononanoate transaminase | 99.15 | |
| PRK08466 | 430 | consensus | 99.15 | |
| PRK06149 | 972 | hypothetical protein; Provisional | 99.14 | |
| PRK07568 | 396 | aspartate aminotransferase; Provisional | 99.14 | |
| PRK06062 | 434 | hypothetical protein; Provisional | 99.14 | |
| PTZ00125 | 415 | ornithine aminotransferase; Provisional | 99.13 | |
| PRK07777 | 386 | aminotransferase; Validated | 99.13 | |
| PRK05093 | 403 | argD bifunctional N-succinyldiaminopimelate-aminotransf | 99.12 | |
| COG0156 | 388 | BioF 7-keto-8-aminopelargonate synthetase and related e | 99.12 | |
| PRK12403 | 460 | putative aminotransferase; Provisional | 99.12 | |
| cd00378 | 402 | SHMT Serine-glycine hydroxymethyltransferase (SHMT). Th | 99.12 | |
| PRK03967 | 337 | histidinol-phosphate aminotransferase; Provisional | 99.12 | |
| COG2008 | 342 | GLY1 Threonine aldolase [Amino acid transport and metab | 99.11 | |
| PRK08088 | 426 | 4-aminobutyrate aminotransferase; Validated | 99.1 | |
| PRK07309 | 390 | aromatic amino acid aminotransferase; Validated | 99.1 | |
| PRK06918 | 454 | 4-aminobutyrate aminotransferase; Reviewed | 99.1 | |
| PRK05630 | 423 | adenosylmethionine--8-amino-7-oxononanoate transaminase | 99.09 | |
| PRK13360 | 441 | omega amino acid--pyruvate transaminase; Provisional | 99.09 | |
| PRK07337 | 388 | aminotransferase; Validated | 99.09 | |
| TIGR01821 | 427 | 5aminolev_synth 5-aminolevulinic acid synthase; InterPr | 99.09 | |
| PRK07681 | 399 | aspartate aminotransferase; Provisional | 99.09 | |
| PRK07894 | 430 | consensus | 99.09 | |
| PRK04260 | 375 | acetylornithine aminotransferase; Provisional | 99.09 | |
| PRK07392 | 358 | threonine-phosphate decarboxylase; Validated | 99.08 | |
| PRK09792 | 421 | PLP-dependent GABA aminotransferase; Provisional | 99.08 | |
| PRK07495 | 422 | 4-aminobutyrate aminotransferase; Provisional | 99.08 | |
| PRK06220 | 384 | consensus | 99.08 | |
| PRK07480 | 459 | putative aminotransferase; Validated | 99.08 | |
| PRK06209 | 431 | glutamate-1-semialdehyde 2,1-aminomutase; Provisional | 99.07 | |
| PRK09264 | 426 | diaminobutyrate--2-oxoglutarate aminotransferase; Valid | 99.07 | |
| PRK02936 | 377 | argD acetylornithine aminotransferase; Provisional | 99.06 | |
| PRK07366 | 388 | succinyldiaminopimelate transaminase; Validated | 99.06 | |
| TIGR03246 | 397 | arg_catab_astC succinylornithine transaminase family. M | 99.06 | |
| PRK06358 | 354 | threonine-phosphate decarboxylase; Provisional | 99.05 | |
| PRK00854 | 404 | rocD ornithine--oxo-acid transaminase; Reviewed | 99.05 | |
| PRK06777 | 421 | 4-aminobutyrate aminotransferase; Provisional | 99.04 | |
| PRK08636 | 403 | aspartate aminotransferase; Provisional | 99.04 | |
| COG0436 | 393 | Aspartate/tyrosine/aromatic aminotransferase [Amino aci | 99.04 | |
| TIGR02006 | 404 | IscS cysteine desulfurase IscS; InterPro: IPR010240 Thi | 99.03 | |
| PRK07323 | 443 | consensus | 99.03 | |
| PRK08363 | 398 | alanine aminotransferase; Validated | 99.01 | |
| PRK06931 | 454 | diaminobutyrate--2-oxoglutarate aminotransferase; Provi | 99.0 | |
| TIGR03372 | 442 | putres_am_tran putrescine aminotransferase. Members of | 99.0 | |
| PRK06836 | 396 | aspartate aminotransferase; Provisional | 98.99 | |
| TIGR03537 | 350 | DapC succinyldiaminopimelate transaminase. Note: the de | 98.99 | |
| COG0160 | 447 | GabT 4-aminobutyrate aminotransferase and related amino | 98.99 | |
| PRK03715 | 395 | argD bifunctional N-succinyldiaminopimelate-aminotransf | 98.99 | |
| PRK00062 | 429 | glutamate-1-semialdehyde aminotransferase; Provisional | 98.98 | |
| COG4992 | 404 | ArgD Ornithine/acetylornithine aminotransferase [Amino | 98.97 | |
| PRK05639 | 457 | 4-aminobutyrate aminotransferase; Provisional | 98.97 | |
| PRK00615 | 433 | glutamate-1-semialdehyde aminotransferase; Provisional | 98.97 | |
| cd00613 | 398 | GDC-P Glycine cleavage system P-protein, alpha- and bet | 98.96 | |
| PRK05769 | 442 | 4-aminobutyrate aminotransferase; Provisional | 98.96 | |
| PRK09082 | 386 | putative aminotransferase; Validated | 98.96 | |
| PRK08742 | 472 | adenosylmethionine--8-amino-7-oxononanoate transaminase | 98.95 | |
| PRK08175 | 395 | aminotransferase; Validated | 98.94 | |
| PRK12389 | 429 | glutamate-1-semialdehyde aminotransferase; Provisional | 98.94 | |
| PRK06942 | 425 | glutamate-1-semialdehyde 2,1-aminomutase; Validated | 98.91 | |
| PRK08960 | 387 | hypothetical protein; Provisional | 98.9 | |
| PRK08056 | 356 | threonine-phosphate decarboxylase; Provisional | 98.89 | |
| PRK01278 | 389 | argD bifunctional N-succinyldiaminopimelate-aminotransf | 98.89 | |
| TIGR01141 | 377 | hisC histidinol-phosphate aminotransferase; InterPro: I | 98.88 | |
| PRK04073 | 396 | rocD ornithine--oxo-acid transaminase; Provisional | 98.88 | |
| PRK08555 | 443 | consensus | 98.85 | |
| PRK07778 | 386 | consensus | 98.8 | |
| TIGR01825 | 392 | gly_Cac_T_rel pyridoxal phosphate-dependent acyltransfe | 98.79 | |
| PRK08354 | 312 | putative aminotransferase; Provisional | 98.74 | |
| PRK09265 | 404 | aminotransferase AlaT; Validated | 98.74 | |
| TIGR01885 | 426 | Orn_aminotrans ornithine--oxo-acid transaminase; InterP | 98.74 | |
| TIGR01822 | 395 | 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase; | 98.69 | |
| TIGR03539 | 357 | DapC_actino succinyldiaminopimelate transaminase. This | 98.68 | |
| KOG1404 | 442 | consensus | 98.63 | |
| PRK12414 | 384 | putative aminotransferase; Provisional | 98.6 | |
| TIGR03538 | 394 | DapC_gpp succinyldiaminopimelate transaminase. This fam | 98.58 | |
| KOG0257 | 420 | consensus | 98.56 | |
| COG0161 | 449 | BioA Adenosylmethionine-8-amino-7-oxononanoate aminotra | 98.51 | |
| PRK09147 | 397 | aminotransferase; Provisional | 98.5 | |
| KOG1402 | 427 | consensus | 98.45 | |
| KOG1360 | 570 | consensus | 98.43 | |
| KOG1359 | 417 | consensus | 98.42 | |
| TIGR03542 | 402 | DAPAT_plant LL-diaminopimelate aminotransferase. This c | 98.42 | |
| COG1167 | 459 | ARO8 Transcriptional regulators containing a DNA-bindin | 98.39 | |
| TIGR01437 | 391 | selA_rel pyridoxal phosphate-dependent enzyme, putative | 98.35 | |
| PRK09440 | 416 | avtA valine--pyruvate transaminase; Provisional | 98.33 | |
| KOG1401 | 433 | consensus | 98.29 | |
| PRK04013 | 364 | argD acetylornithine/acetyl-lysine aminotransferase; Pr | 98.24 | |
| KOG1357 | 519 | consensus | 98.23 | |
| PRK09257 | 397 | aromatic amino acid aminotransferase; Provisional | 98.22 | |
| PRK07590 | 409 | L,L-diaminopimelate aminotransferase; Validated | 98.22 | |
| KOG1368 | 384 | consensus | 98.21 | |
| TIGR00707 | 402 | argD acetylornithine and succinylornithine aminotransfe | 98.21 | |
| PRK07865 | 364 | N-succinyldiaminopimelate aminotransferase; Reviewed | 98.17 | |
| PRK05839 | 376 | hypothetical protein; Provisional | 98.0 | |
| COG1168 | 388 | MalY Bifunctional PLP-dependent enzyme with beta-cystat | 97.84 | |
| KOG0629 | 510 | consensus | 95.81 | |
| TIGR03235 | 354 | DNA_S_dndA cysteine desulfurase DndA. This model descri | 99.92 | |
| cd00609 | 350 | AAT_like Aspartate aminotransferase family. This family | 99.21 | |
| PRK03262 | 355 | consensus | 99.06 | |
| PRK01688 | 355 | histidinol-phosphate aminotransferase; Provisional | 99.03 | |
| PRK02769 | 380 | histidine decarboxylase; Provisional | 99.0 | |
| cd00616 | 352 | AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family | 98.99 | |
| pfam02347 | 429 | GDC-P Glycine cleavage system P-protein. This family co | 98.25 | |
| TIGR00474 | 448 | selA L-seryl-tRNA selenium transferase; InterPro: IPR00 | 96.63 | |
| TIGR03576 | 346 | pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 famil | 92.06 | |
| cd01494 | 170 | AAT_I Aspartate aminotransferase (AAT) superfamily (fol | 99.74 | |
| PRK04311 | 465 | selenocysteine synthase; Provisional | 97.52 | |
| pfam05889 | 389 | SLA_LP_auto_ag Soluble liver antigen/liver pancreas ant | 94.74 | |
| TIGR03531 | 444 | selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transfe | 90.01 | |
| cd06452 | 361 | SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs | 99.48 | |
| PRK08249 | 398 | cystathionine gamma-synthase; Provisional | 99.42 | |
| PRK09331 | 386 | Sep-tRNA:Cys-tRNA synthetase; Provisional | 99.42 | |
| PRK08776 | 405 | cystathionine gamma-synthase; Provisional | 99.42 | |
| PRK09028 | 394 | cystathionine beta-lyase; Provisional | 99.41 | |
| PRK07503 | 403 | methionine gamma-lyase; Provisional | 99.4 | |
| PRK08045 | 386 | cystathionine gamma-synthase; Provisional | 99.38 | |
| PRK05968 | 389 | hypothetical protein; Provisional | 99.37 | |
| PRK07049 | 427 | methionine gamma-lyase; Validated | 99.35 | |
| PRK08114 | 395 | cystathionine beta-lyase; Provisional | 99.34 | |
| PRK05967 | 392 | cystathionine beta-lyase; Provisional | 99.33 | |
| PRK06234 | 399 | methionine gamma-lyase; Provisional | 99.32 | |
| PRK08064 | 390 | cystathionine beta-lyase; Provisional | 99.32 | |
| PRK07811 | 386 | cystathionine gamma-synthase; Provisional | 99.31 | |
| PRK08861 | 388 | cystathionine gamma-synthase; Provisional | 99.3 | |
| PRK07504 | 397 | O-succinylhomoserine sulfhydrylase; Reviewed | 99.29 | |
| PTZ00094 | 450 | serine hydroxymethyltransferase; Provisional | 99.27 | |
| PRK08247 | 366 | cystathionine gamma-synthase; Reviewed | 99.26 | |
| PRK06460 | 375 | hypothetical protein; Provisional | 99.25 | |
| PRK07582 | 370 | cystathionine gamma-lyase; Validated | 99.24 | |
| PRK03317 | 369 | histidinol-phosphate aminotransferase; Provisional | 99.24 | |
| PRK07050 | 394 | cystathionine beta-lyase; Provisional | 99.24 | |
| PRK06176 | 379 | cystathionine gamma-synthase/cystathionine beta-lyase; | 99.21 | |
| PRK08574 | 384 | cystathionine gamma-synthase; Provisional | 99.21 | |
| PRK13034 | 422 | serine hydroxymethyltransferase; Reviewed | 99.2 | |
| PRK08134 | 433 | O-acetylhomoserine aminocarboxypropyltransferase; Valid | 99.19 | |
| PRK07812 | 436 | O-acetylhomoserine aminocarboxypropyltransferase; Valid | 99.19 | |
| PRK11658 | 379 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotran | 99.18 | |
| PRK06702 | 432 | O-acetylhomoserine aminocarboxypropyltransferase; Valid | 99.18 | |
| PRK07810 | 406 | O-succinylhomoserine sulfhydrylase; Provisional | 99.17 | |
| PRK06767 | 386 | methionine gamma-lyase; Provisional | 99.17 | |
| pfam01053 | 381 | Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme | 99.16 | |
| COG3844 | 407 | Kynureninase [Amino acid transport and metabolism] | 99.15 | |
| PRK00451 | 449 | glycine dehydrogenase subunit 1; Validated | 99.15 | |
| PRK08248 | 431 | O-acetylhomoserine aminocarboxypropyltransferase; Valid | 99.14 | |
| PRK08133 | 391 | O-succinylhomoserine sulfhydrylase; Validated | 99.13 | |
| PRK05994 | 426 | O-acetylhomoserine aminocarboxypropyltransferase; Valid | 99.12 | |
| cd00614 | 369 | CGS_like CGS_like: Cystathionine gamma-synthase is a PL | 99.12 | |
| PRK04635 | 346 | histidinol-phosphate aminotransferase; Provisional | 99.12 | |
| PRK07324 | 373 | transaminase; Validated | 99.11 | |
| PRK07671 | 377 | cystathionine beta-lyase; Provisional | 99.11 | |
| COG0399 | 374 | WecE Predicted pyridoxal phosphate-dependent enzyme app | 99.1 | |
| TIGR03588 | 380 | PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotran | 99.09 | |
| PRK05613 | 437 | O-acetylhomoserine aminocarboxypropyltransferase; Valid | 99.09 | |
| PRK06084 | 424 | O-acetylhomoserine aminocarboxypropyltransferase; Valid | 99.07 | |
| PRK04781 | 362 | histidinol-phosphate aminotransferase; Provisional | 99.04 | |
| pfam01041 | 363 | DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase f | 99.03 | |
| PRK05939 | 396 | hypothetical protein; Provisional | 99.03 | |
| TIGR02539 | 381 | SepCysS Sep-tRNA:Cys-tRNA synthase; InterPro: IPR013375 | 99.01 | |
| COG0112 | 413 | GlyA Glycine/serine hydroxymethyltransferase [Amino aci | 99.01 | |
| PRK06434 | 384 | cystathionine gamma-lyase; Validated | 99.0 | |
| PRK06058 | 446 | 4-aminobutyrate aminotransferase; Provisional | 98.96 | |
| PRK07269 | 364 | cystathionine gamma-synthase; Reviewed | 98.96 | |
| PRK11706 | 375 | TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional | 98.95 | |
| PRK06959 | 339 | putative threonine-phosphate decarboxylase; Provisional | 98.95 | |
| COG0626 | 396 | MetC Cystathionine beta-lyases/cystathionine gamma-synt | 98.91 | |
| PRK13580 | 493 | serine hydroxymethyltransferase; Provisional | 98.89 | |
| PRK05664 | 330 | threonine-phosphate decarboxylase; Reviewed | 98.89 | |
| PRK06425 | 332 | histidinol-phosphate aminotransferase; Validated | 98.88 | |
| COG1103 | 382 | Archaea-specific pyridoxal phosphate-dependent enzymes | 98.88 | |
| PRK08297 | 449 | L-lysine aminotransferase; Provisional | 98.82 | |
| COG2873 | 426 | MET17 O-acetylhomoserine sulfhydrylase [Amino acid tran | 98.6 | |
| TIGR03251 | 431 | LAT_fam L-lysine 6-transaminase. Characterized members | 98.57 | |
| PRK08637 | 386 | hypothetical protein; Provisional | 98.56 | |
| TIGR02407 | 413 | ectoine_ectB diaminobutyrate--2-oxoglutarate aminotrans | 98.42 | |
| KOG2467 | 477 | consensus | 98.37 | |
| COG0001 | 432 | HemL Glutamate-1-semialdehyde aminotransferase [Coenzym | 98.35 | |
| COG1982 | 557 | LdcC Arginine/lysine/ornithine decarboxylases [Amino ac | 98.29 | |
| KOG3846 | 465 | consensus | 98.12 | |
| COG0403 | 450 | GcvP Glycine cleavage system protein P (pyridoxal-bindi | 98.03 | |
| COG1448 | 396 | TyrB Aspartate/tyrosine/aromatic aminotransferase [Amin | 97.94 | |
| PRK13578 | 720 | ornithine decarboxylase; Provisional | 97.78 | |
| TIGR01814 | 444 | kynureninase kynureninase; InterPro: IPR010111 This ent | 97.63 | |
| TIGR01265 | 424 | tyr_nico_aTase tyrosine/nicotianamine aminotransferases | 97.45 | |
| PRK04366 | 490 | glycine dehydrogenase subunit 2; Validated | 97.44 | |
| PRK13355 | 518 | bifunctional HTH-domain containing protein/aminotransfe | 97.3 | |
| PRK12566 | 954 | glycine dehydrogenase; Provisional | 97.03 | |
| PRK05367 | 955 | glycine dehydrogenase; Provisional | 96.88 | |
| KOG0256 | 471 | consensus | 96.86 | |
| TIGR00709 | 445 | dat 2,4-diaminobutyrate 4-transaminase; InterPro: IPR00 | 95.84 | |
| KOG1358 | 467 | consensus | 95.41 | |
| KOG0259 | 447 | consensus | 94.82 | |
| TIGR01324 | 389 | cysta_beta_ly_B cystathionine beta-lyase; InterPro: IPR | 94.55 | |
| KOG2040 | 1001 | consensus | 93.96 | |
| TIGR02080 | 383 | O_succ_thio_ly O-succinylhomoserine (thiol)-lyase; Inte | 92.87 | |
| KOG1383 | 491 | consensus | 90.65 | |
| KOG1411 | 427 | consensus | 90.12 | |
| COG0076 | 460 | GadB Glutamate decarboxylase and related PLP-dependent | 99.24 | |
| pfam01212 | 288 | Beta_elim_lyase Beta-eliminating lyase. | 99.17 | |
| pfam00282 | 370 | Pyridoxal_deC Pyridoxal-dependent decarboxylase conserv | 98.97 | |
| PRK06855 | 433 | aminotransferase; Validated | 98.31 | |
| TIGR01329 | 415 | cysta_beta_ly_E cystathionine beta-lyase; InterPro: IPR | 98.25 | |
| pfam00202 | 338 | Aminotran_3 Aminotransferase class-III. | 98.19 | |
| pfam06838 | 405 | Alum_res Aluminium resistance protein. This family repr | 92.5 | |
| PRK09221 | 445 | beta alanine--pyruvate transaminase; Provisional | 99.02 | |
| TIGR00713 | 434 | hemL glutamate-1-semialdehyde-2,1-aminomutase; InterPro | 96.75 | |
| pfam01276 | 417 | OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain. | 98.84 | |
| cd00615 | 294 | Orn_deC_like Ornithine decarboxylase family. This famil | 98.7 | |
| TIGR01326 | 434 | OAH_OAS_sulfhy O-acetylhomoserine aminocarboxypropyltra | 98.65 | |
| KOG0053 | 409 | consensus | 98.46 | |
| TIGR01328 | 392 | met_gam_lyase methionine gamma-lyase; InterPro: IPR0062 | 98.06 | |
| pfam03841 | 367 | SelA L-seryl-tRNA selenium transferase. | 98.07 | |
| COG1921 | 395 | SelA Selenocysteine synthase [seryl-tRNASer selenium tr | 98.06 | |
| TIGR01325 | 386 | O_suc_HS_sulf O-succinylhomoserine sulfhydrylase; Inter | 97.4 |
| >PRK03080 phosphoserine aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=659.27 Aligned_cols=379 Identities=56% Similarity=0.973 Sum_probs=355.0 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH Q ss_conf 98765564689988868887768968999986321036532898899999999999999968899857999748734899 Q gi|254780153|r 1 MLDMRKPTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAV 80 (391) Q Consensus 1 ~~~~~~~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ 80 (391) T Consensus 1 ~~~~~~~~~~P~~~~F~~GPs~~~p~~~l~~l~~sile~SHRs~~f~~i~~~a~~~lr~Ll~iPddY~Vlfl~GGaT~qf 80 (381) T PRK03080 1 MTLTIPPALRPADPRFSSGPCKKRPGWSLDALADALLGRSHRQAPGKAKLGEAIDGTRELLSLPADYEVGIVPGSDTGAV 80 (381) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH T ss_conf 98778965679999968888388810216661531112762773899999999999999958999847999678467999 Q ss_pred HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCC-CCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEEC Q ss_conf 9875320578970799707368888876532387-630674057776578676785565799742024202203203502 Q gi|254780153|r 81 EMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSL-QDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIP 159 (391) Q Consensus 81 ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~ 159 (391) T Consensus 81 ~~i~~nLl~~~~~~~~~~G~fs~kwa~~a~~~~~~~~~~v~~a~~g~iP~~~~~~~~~d~~~t~NeTi~Gv~~p~~~~~~ 160 (381) T PRK03080 81 EMALWSLLGARRVDHLAWESFGAKWATDVVKQLKLEDPRVLKADYGELPDLSAVDFDVDVVFTWNGTTSGVRVPNADWIG 160 (381) T ss_pred HHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHCCCCCCEEEEECCCEEEEECCCCCCCC T ss_conf 99987455777772787431446999999974366761587057777888123376564798735640108746767788 Q ss_pred CCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC Q ss_conf 56861488640110110254556857999700120017665154456778887654114457783123200112321033 Q gi|254780153|r 160 ESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239 (391) Q Consensus 160 ~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (391) T Consensus 161 ~~~~~llv~D~SS~i~s~~iD~sk~dviyagaQKnlG~~aGl~vvI~sp~al~r~~~~~~~r~iP~~l~~~~~~~a~e~~ 240 (381) T PRK03080 161 ADREGLTICDATSAAFALPLDWAKLDVYTFSWQKVLGGEGGHGMLILSPRAVERLESYAPAWPLPKIFRLTKGGKLIENI 240 (381) T ss_pred CCCCCCEEEECHHHHCCCCCCHHHCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 88886278743244436767855742799870002578774279997699998886138877884464245578887646 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC Q ss_conf 47864466644889999999986201031899999999779999999874797167668820036531789824731011 Q gi|254780153|r 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS 319 (391) Q Consensus 240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~ 319 (391) T Consensus 241 ~~~s~~NTPp~f~iy~~~~~l~Wl~~~GGl~~~~~rn~~ka~lLY~~id~s~~~~~~v~d~~~RS~~nv~f~~~d~~--- 317 (381) T PRK03080 241 FKGQTINTPSMLTVEDYLDQLDWAKSIGGLDALIARTAANSSVLYDWAEKTPWATPLAADPATRSNTSVCLDFVDPA--- 317 (381) T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCH--- T ss_conf 53464899618999999999999997288999999999999999999970887433668844523764899945805--- Q ss_pred CCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 373456788899999888628287266556767505686158889999999999999999999998 Q gi|254780153|r 320 LDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391) Q Consensus 320 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391) T Consensus 318 ---~~~~~~~~~~~~~l~~e~g~~di~ghR~~~~GlR~s~y~av~~~dv~aL~~~ld~~~~~~~~~ 380 (381) T PRK03080 318 ---DAQAAFDKALVAKLLRENGAVDIGPYRDAPNGLRIWCGATVEPSDVEALTPWLDWAFERLKAA 380 (381) T ss_pred ---HHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC T ss_conf ---547999999999999829874565535689855888327789999999999999999998600 |
|
| >TIGR01364 serC_1 phosphoserine aminotransferase; InterPro: IPR003248 Phosphoserine aminotransferases (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=581.01 Aligned_cols=347 Identities=22% Similarity=0.310 Sum_probs=301.2 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHC----------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH Q ss_conf 88688877689689999863210----------36532898899999999999999968899857999748734899987 Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGAL----------LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391) Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~----------l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391) T Consensus 2 ~NF~AGPA~L-P~~VL~~aq~Ellnf~~~G~SVmEiSHRsk~F~~v~~~Ae~dlR~LL~iPd~Y~vLFLQGGAt~QFa~~ 80 (391) T TIGR01364 2 YNFSAGPAAL-PEEVLEQAQKELLNFNGLGMSVMEISHRSKEFEAVASEAESDLRELLNIPDNYEVLFLQGGATTQFAAV 80 (391) T ss_pred CCCCCCCCCC-CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH T ss_conf 4478872227-888999999998657517976699853868999999999999998824799826898738724689999 Q ss_pred HHHCCC--CCC------EEEEEECCHHHHHHHHHHHCCC---CCEEEE-----ECCCCCCCCHHHCCCC---CCEEEEE- Q ss_conf 532057--897------0799707368888876532387---630674-----0577765786767855---6579974- Q gi|254780153|r 84 LWSLLG--YRG------VDVLAWESFGLGWMSDIRQLSL---QDVREF-----TAPYGSLPDFSKVDFD---RDVVFVW- 143 (391) Q Consensus 84 ~~nl~~--~~~------~~~~~~g~~~~r~~~~~~~~~~---~~~~~~-----~~~~g~~~~~~~~~~~---~~v~~~h- 143 (391) T Consensus 81 PlNL~~~~~~~~GK~~~A~Y~~TG~WS~kA~~EA~~~~~~~G~~v~~~~~~~~~~~y~~iP~~~~w~~~~~G~~~~Yvh~ 160 (391) T TIGR01364 81 PLNLLAAKEGKNGKILVADYIVTGAWSKKALKEAKKLGNPLGVEVNVVASGEEEGNYTKIPDQSEWEISEDGEDAAYVHY 160 (391) T ss_pred HHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE T ss_conf 99889753699985788500221758899999988604304656776142000578642777021232778787466572 Q ss_pred --EECCCCEEEC-CEEEECC-CCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHC-- Q ss_conf --2024202203-2035025-686148864011011025455685799970012001766515445677888765411-- Q gi|254780153|r 144 --NGTTSGVCVP-DVGFIPE-SREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKY-- 217 (391) Q Consensus 144 --~ETstGv~~~-~~~~~~~-~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~-- 217 (391) T Consensus 161 c~NETi~Gvef~P~~P~~~~~~Pn~~LVaDmSS~ilSR~~Dvs~fglIYAGAQKN~-GpaG~TvVIvR~DLLgr~~~~~L 239 (391) T TIGR01364 161 CANETIHGVEFRPELPEVKNKDPNAPLVADMSSNILSRPIDVSKFGLIYAGAQKNI-GPAGLTVVIVRKDLLGRASDAEL 239 (391) T ss_pred CCCCCCCCEEECCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCEEEEEHHHCC-CCCEEEEEEECCHHHCCCCCCCH T ss_conf 57871102166476886788897526885154323157678511355750032120-53226899981144156762302 Q ss_pred --CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf --445778312320011232103347864466644889999999986201031899999999779999999874797167 Q gi|254780153|r 218 --VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIEN 295 (391) Q Consensus 218 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~ 295 (391) T Consensus 240 H~L~vP~~P~~~~Y~~~~~------~~SmYNTPPtF~iY~~~LVf~Wlk~~GGv~~~e~~N~~KA~LLY~~ID~S~gFY~ 313 (391) T TIGR01364 240 HKLGVPITPSMLNYKIHAE------NDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDAIDNSNGFYR 313 (391) T ss_pred HHCCCCCCCCCCCHHHHHH------CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC T ss_conf 0166659784132189886------3887334025899987889999986062899999989999999999864898011 Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH Q ss_conf 66882003653178982473101137345678889999988862828726655676750568615888999999999999 Q gi|254780153|r 296 LAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL 375 (391) Q Consensus 296 ~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391) T Consensus 314 ~~v~k~~RS~MNV~F~~~~~~---G~~eLe~~Fl~eA-----~~~gl~~LKGHRsVG-G~RASiYNA~ple~Vq~Lv~FM 384 (391) T TIGR01364 314 NPVDKRARSLMNVVFTLPNEK---GDEELEKEFLKEA-----EERGLVGLKGHRSVG-GMRASIYNALPLEGVQALVDFM 384 (391) T ss_pred CCCCHHHCCCCCEEEECCCCC---CCHHHHHHHHHHH-----HHCCCHHCCCCCEEC-CEEEEHHCCCCHHHHHHHHHHH T ss_conf 643754267464221378877---8555548999999-----970500127630331-2521011176889999999999 Q ss_pred HH Q ss_conf 99 Q gi|254780153|r 376 RW 377 (391) Q Consensus 376 e~ 377 (391) T Consensus 385 ~~ 386 (391) T TIGR01364 385 KE 386 (391) T ss_pred HH T ss_conf 99 |
6.1.52 from EC) catalyse the conversion of O-phospho-L-serine and oxoglutarate to 3-phosphonooxypyruvate and L-glutamate in the major phosphorylated serine biosynthesis pathway. In bacteria it is also equired for the biosynthesis of pyridoxine. The enzyme requires pyridoxal phosphate as a cofactor, and is part of the aminotransferase class-V family.; GO: 0006564 L-serine biosynthetic process. |
| >cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=548.09 Aligned_cols=334 Identities=24% Similarity=0.348 Sum_probs=291.0 Q ss_pred CCCCCCCCCCCHHHHHHHHHHH----------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH Q ss_conf 8868887768968999986321----------036532898899999999999999968899857999748734899987 Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGA----------LLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391) Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~----------~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391) T Consensus 1 ~NF~aGPa~lp~~-Vl~~~~~e~~~~~~~G~sile~SHRs~~f~~i~~~a~~~lr~Ll~iPd~Y~Vlfl~GGat~qf~~i 79 (355) T cd00611 1 INFSAGPAALPEE-VLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAV 79 (355) T ss_pred CCCCCCCCCCCHH-HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH T ss_conf 9678887658999-999999997542688601551266887899999999999999848999808999578449999999 Q ss_pred HHHCCCCCC-EEEEEECCHHHHHHHHHHHCCCCCEEEE---ECCCCCCCCHHHCCCCCC---EEEEEEECCCCEEECCEE Q ss_conf 532057897-0799707368888876532387630674---057776578676785565---799742024202203203 Q gi|254780153|r 84 LWSLLGYRG-VDVLAWESFGLGWMSDIRQLSLQDVREF---TAPYGSLPDFSKVDFDRD---VVFVWNGTTSGVCVPDVG 156 (391) Q Consensus 84 ~~nl~~~~~-~~~~~~g~~~~r~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~---v~~~h~ETstGv~~~~~~ 156 (391) T Consensus 80 p~Nll~~~~~a~y~~tG~ws~ka~~eA~~~~~~~~i~~~~~~~~~~~iP~~~~~~~~~~~~yvh~t~NETi~Gv~~~~~- 158 (355) T cd00611 80 PLNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFDEV- 158 (355) T ss_pred HHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEECCCC- T ss_conf 9851478870589973726899999998746774103665667877689934327888777799932577534344656- Q ss_pred EECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH Q ss_conf 50256861488640110110254556857999700120017665154456778887654114457783123200112321 Q gi|254780153|r 157 FIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391) Q Consensus 157 ~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391) T Consensus 159 --p~~~~~~lV~D~SS~~~s~~iD~~~~d~iYagaQKnl-GpaG~tvvIir~~ll~~~~-----~~~P~~l~y~~~~~-- 228 (355) T cd00611 159 --PDTGGVPLVADMSSNILSRPIDVSKFGVIYAGAQKNL-GPAGVTVVIVRKDLLGKAR-----KITPSMLNYKTHAD-- 228 (355) T ss_pred --CCCCCCCEEEEECCHHCCCCCCHHHCCEEEEECCCCC-CCCCEEEEEECHHHHHHCC-----CCCCCHHHHHHHHH-- T ss_conf --6778962787502054086767789218998710015-6665089998499971024-----46973200999985-- Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789824731 Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316 (391) Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391) T Consensus 229 ----~~s~~NTPp~f~iy~~~lv~~Wl~~~GGl~~~~~~n~~kA~~LY~~iD~s~~~y~~~v~~~~RS~mnv~f~~~~~~ 304 (355) T cd00611 229 ----NNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEE 304 (355) T ss_pred ----HCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHCCCCEEEEEECCHH T ss_conf ----2555579627999999999999887689999999999999999999985888011789823358775899858878 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH Q ss_conf 011373456788899999888628287266556767505686158889999999999999 Q gi|254780153|r 317 IASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391) Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391) T Consensus 305 l-------~~~Fl~~----a-~~~Gl~~lkGhRsvG-g~RaS~ynA~~~e~V~aL~~fm~ 351 (355) T cd00611 305 L-------EKEFLKE----A-EAAGMIGLKGHRSVG-GIRASIYNALSLEGVQALADFMK 351 (355) T ss_pred H-------HHHHHHH----H-HHCCCCCCCCCCCCC-CEEEEEECCCCHHHHHHHHHHHH T ss_conf 8-------9999999----9-987882556875223-52788508989999999999999 |
This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine. |
| >PRK05355 phosphoserine aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=535.64 Aligned_cols=340 Identities=22% Similarity=0.330 Sum_probs=292.9 Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHH----------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH Q ss_conf 9988868887768968999986321----------036532898899999999999999968899857999748734899 Q gi|254780153|r 11 PKRPFFSSGPCAKRPGWSLGILEGA----------LLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAV 80 (391) Q Consensus 11 p~~~~F~pGP~~~~p~~v~~~~~~~----------~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ 80 (391) T Consensus 2 ~r~~NF~aGPa~LP~~-Vl~~~~~e~~~~~g~G~silEiSHRs~~f~~i~~~a~~~lr~Ll~iPd~YeVlflqGGat~qF 80 (360) T PRK05355 2 MRVYNFSAGPAMLPEE-VLEQAQQELLDWNGSGMSVMEISHRSKEFIAVAEEAEADLRELLNIPDNYKVLFLQGGASLQF 80 (360) T ss_pred CCCCCCCCCCCCCCHH-HHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH T ss_conf 9851178885438999-999999998602588860575455888899999999999999848999818999578458999 Q ss_pred HHHHHHCCCCCC-EEEEEECCHHHHHHHHHHHCCCCCEEEEECC--CCCCCCHHHCCCCCC---EEEEEEECCCCEEECC Q ss_conf 987532057897-0799707368888876532387630674057--776578676785565---7997420242022032 Q gi|254780153|r 81 EMALWSLLGYRG-VDVLAWESFGLGWMSDIRQLSLQDVREFTAP--YGSLPDFSKVDFDRD---VVFVWNGTTSGVCVPD 154 (391) Q Consensus 81 ea~~~nl~~~~~-~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~---v~~~h~ETstGv~~~~ 154 (391) T Consensus 81 ~~ip~Nll~~~~~a~y~~tG~Ws~KA~~EA~~~~~~~v~~~~~~~~~~~iP~~~~~~~~~~~~Y~h~t~NETi~Gv~~~~ 160 (360) T PRK05355 81 AMVPLNLLGKGGKADYVVTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTPNETIDGTEIHE 160 (360) T ss_pred HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCEEECC T ss_conf 99987467889802389538889999997376168732013466777558986652779775679971477501046101 Q ss_pred EEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH Q ss_conf 03502568614886401101102545568579997001200176651544567788876541144577831232001123 Q gi|254780153|r 155 VGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391) Q Consensus 155 ~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391) T Consensus 161 ~---P~~~~~pLV~DmSS~~lsrpiD~~~~d~iYagaQKNl-GpaGvtvvIvr~~ll~~~-----~~~iP~~l~y~~~~~ 231 (360) T PRK05355 161 L---PDTGDVPLVADMSSDILSRPIDVSKFGLIYAGAQKNI-GPAGLTIVIVREDLLGRA-----LPNIPSMLDYKTHAD 231 (360) T ss_pred C---CCCCCCCEEEECCCCCCCCCCCHHHCCEEEEECCCCC-CCCCCEEEEEEHHHHHCC-----CCCCCCHHHHHHHHH T ss_conf 3---6668984799734543477677789157998743357-876518999759996223-----668960530999986 Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898247 Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD 314 (391) Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391) T Consensus 232 ------~~Sl~NTPp~f~iy~~~lvl~Wl~~~GGl~~~~~~n~~KA~lLY~~iD~s~fy~~~v-~~~~RS~mNV~F~~~~ 304 (360) T PRK05355 232 ------NDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAIEKRNQEKAALLYDAIDSSDFYRNPV-APENRSRMNVPFTLAD 304 (360) T ss_pred ------HCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CHHHCCCCEEEEECCC T ss_conf ------367666884289999999999998617699999999998999999986078635889-8565686544787187 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 3101137345678889999988862828726655676750568615888999999999999999999 Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 305 ~~l-------~~~Fl~~-----a~~~Gl~~LkGhRsvG-G~RaSlYNa~~~e~V~~L~~fm~-~F~~ 357 (360) T PRK05355 305 EEL-------DKKFLAE-----AEAAGLVGLKGHRSVG-GMRASIYNAMPLEGVQALVDFMK-EFEK 357 (360) T ss_pred HHH-------HHHHHHH-----HHHCCCCCCCCCCCCC-CEEEEECCCCCHHHHHHHHHHHH-HHHH T ss_conf 778-------9999999-----9987986666876538-52788017999999999999999-9999 |
|
| >TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=533.64 Aligned_cols=343 Identities=19% Similarity=0.151 Sum_probs=290.2 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE Q ss_conf 88688877689689999863210365328988999999999999999688998579997487348999875320578970 Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV 93 (391) Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~ 93 (391) T Consensus 1 lL~~PGP~~v~~~-V~~am~~~~---~HRs~~F~~i~~~~~~~L~~l~~~~~~~~v~~l~gsGt~a~Ea~~~nl~~~g~~ 76 (355) T TIGR03301 1 ILLTPGPLSTSAT-VRDAMLVDW---CHWDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGK 76 (355) T ss_pred CCCCCCCCCCCHH-HHHHHCCCC---CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCE T ss_conf 9765899999999-999718777---889889999999999989999589998479999165599999999852367987 Q ss_pred E-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-------CCCEEEEEEECCCCEEECCEEE--ECCCCC Q ss_conf 7-99707368888876532387630674057776578676785-------5657997420242022032035--025686 Q gi|254780153|r 94 D-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-------DRDVVFVWNGTTSGVCVPDVGF--IPESRE 163 (391) Q Consensus 94 ~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~v~~~h~ETstGv~~~~~~~--~~~~~~ 163 (391) T Consensus 77 vlv~~~G~fg~r~~~~a~~~g-~~~~~~~~~~g~~~~~~~v~~~l~~~~~~~~v~~~h~ETstGv~~~~~~i~~~~~~~~ 155 (355) T TIGR03301 77 LLVLINGAYGERLAKICEYLG-IPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHG 155 (355) T ss_pred EEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCC T ss_conf 999954889999999999829-9669973688778998999999725778548999501267874175376656650479 Q ss_pred CEEEEEECCHHHHCCCCC--CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCC Q ss_conf 148864011011025455--685799970012001766515445677888765411445778312320011232103347 Q gi|254780153|r 164 GLVICDATSAVFARHIDF--NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFC 241 (391) Q Consensus 164 ~llivD~vSs~g~~p~d~--~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (391) T Consensus 156 ~llvVDavSs~g~~p~d~~~~gvD~~~~~sQK~l~~ppGl~~v~~~~~~~~~~~~~----~~~~y~dl~~~~~~--~~~~ 229 (355) T TIGR03301 156 AVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGN----ARSLYLDLYDQWAY--MEKT 229 (355) T ss_pred CEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHCCCC----CCCCCCCHHHHHHH--HHCC T ss_conf 64999745643568642011565899953655567888757888669999751379----87666358999988--6347 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC Q ss_conf 86446664488999999998620103189999999977999999987479716766882003653178982473101137 Q gi|254780153|r 242 GETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLD 321 (391) Q Consensus 242 ~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~ 321 (391) T Consensus 230 g~~~~Tppv~~i~al~~al~~i~~eGGl~~~~~r~~~~a~~l~~~l~~lg-l~~~~-~~~~~s~~vt~~~~p~~~~~--d 305 (355) T TIGR03301 230 GKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLL-PERWQSPIIVSFLYPDDPDF--D 305 (355) T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCC-CHHHCCCCEEEEECCCCCCC--C T ss_conf 98787885499999999999999723799999999999999999999869-94358-91564986699988998885--7 Q ss_pred HHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 3456788899999888628287266556767505686158889999999999999999 Q gi|254780153|r 322 INSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391) Q Consensus 322 ~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391) T Consensus 306 -------~~~~~~~l~~~g~~i-~~G~~~~~~~fRig~mG~~~~~dv~~ll~~le~~L 355 (355) T TIGR03301 306 -------FDDFYQELKERGFVI-YPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355) T ss_pred -------HHHHHHHHHHCCEEE-ECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC T ss_conf -------999999999779078-57876779989898189999999999999999769 |
This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level HMM (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different. |
| >PRK12462 phosphoserine aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=534.11 Aligned_cols=343 Identities=22% Similarity=0.318 Sum_probs=294.8 Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHC----------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH Q ss_conf 6899888688877689689999863210----------365328988999999999999999688998579997487348 Q gi|254780153|r 9 RKPKRPFFSSGPCAKRPGWSLGILEGAL----------LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG 78 (391) Q Consensus 9 ~~p~~~~F~pGP~~~~p~~v~~~~~~~~----------l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~ 78 (391) T Consensus 1 m~~~~~NF~aGPa~L-P~~Vl~~~~~e~~~~~~~G~simE~SHRs~~f~~i~~~a~~~lr~Ll~iPd~Y~VlflqGGAt~ 79 (364) T PRK12462 1 MHRNQLNFSGGPGAL-PDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAQADLRDLLGIPDEYGVVFLQGGSSL 79 (364) T ss_pred CCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHH T ss_conf 996762158886448-9999999999986056897027850668888999999999999998589998279995681789 Q ss_pred HHHHHHHHCCCCCCE--EEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCCC---CCEEEEEEECCCCEE Q ss_conf 999875320578970--799707368888876532387630674--0577765786767855---657997420242022 Q gi|254780153|r 79 AVEMALWSLLGYRGV--DVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDFD---RDVVFVWNGTTSGVC 151 (391) Q Consensus 79 ~~ea~~~nl~~~~~~--~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~---~~v~~~h~ETstGv~ 151 (391) T Consensus 80 qf~~ip~Nll~~~~~~a~y~~tG~WS~kA~~EA~k~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~y~h~t~NeTi~Gvq 159 (364) T PRK12462 80 QFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAALDWDARAPFRHYVSNETVEGLQ 159 (364) T ss_pred HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCEE T ss_conf 99999863756788523499627868999999997589148623566888646774322778884469862577423324 Q ss_pred ECCEEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH Q ss_conf 03203502568614886401101102545568579997001200176651544567788876541144577831232001 Q gi|254780153|r 152 VPDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391) Q Consensus 152 ~~~~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391) T Consensus 160 ~~~~---~~~~~~plV~DmSS~~lsrpiD~s~~~viYagaQKN~-G~aG~tvvIir~dll~~~~~-----~iP~~ldy~~ 230 (364) T PRK12462 160 FPDA---ADLPDSPLIADMSSDFMSRPFDVRAYGMVYAHAQKNL-GPAGVTVAIIRRALLERVPD-----TLPPMLDFRT 230 (364) T ss_pred ECCC---CCCCCCEEEEECCHHHHCCCCCHHHEEEEEEECCCCC-CCCCEEEEEECHHHHCCCCC-----CCCCCCCHHH T ss_conf 1567---8999973887346065167656779038998621125-66661899987999616220-----3864021888 Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE Q ss_conf 12321033478644666448899999999862010-31899999999779999999874797167668820036531789 Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKM-GGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391) Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~-gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391) T Consensus 231 ~~~------~~S~yNTPp~f~Iy~~~lvl~Wl~~~~GGl~~~~~~n~~Ka~~LY~~iD~s~~fy~~~v~~~~RS~mNv~F 304 (364) T PRK12462 231 HVE------HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAF 304 (364) T ss_pred HHH------HCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEE T ss_conf 986------08878894269999999999999862135589999999999999999971878766889846588588468 Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 82473101137345678889999988862828726655676750568615888999999999999999999 Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 305 ~~~~~~l-------~~~Fl~~-----a~~~Gl~~lkGhRsvG-G~RaSlYNa~~~e~V~~L~~fM~-~F~~ 361 (364) T PRK12462 305 RFRQPRL-------DTLFKEQ-----STEAGFCGLSGHRSIG-GIRASLYNAVSEQAVSRLCAFLK-DFAI 361 (364) T ss_pred ECCCHHH-------HHHHHHH-----HHHCCCCCCCCCCCCC-CCEEECCCCCCHHHHHHHHHHHH-HHHH T ss_conf 1497667-------8999999-----9987986651887114-52677117999999999999999-9998 |
|
| >COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=533.40 Aligned_cols=347 Identities=34% Similarity=0.516 Sum_probs=303.4 Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHH----------CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH Q ss_conf 689988868887768968999986321----------0365328988999999999999999688998579997487348 Q gi|254780153|r 9 RKPKRPFFSSGPCAKRPGWSLGILEGA----------LLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG 78 (391) Q Consensus 9 ~~p~~~~F~pGP~~~~p~~v~~~~~~~----------~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~ 78 (391) T Consensus 2 ~~~~~~nFsaGPa~lp~~-vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~ 80 (365) T COG1932 2 SMPRVYNFSAGPAALPPE-VLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATG 80 (365) T ss_pred CCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH T ss_conf 987788878885248989-9999999886341678630122133388899999999989999579987469997485378 Q ss_pred HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCC----CCEEEEECCCCCCCCHHHCCCCC-C--EEEEEEECCCCEE Q ss_conf 999875320578970799707368888876532387----63067405777657867678556-5--7997420242022 Q gi|254780153|r 79 AVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSL----QDVREFTAPYGSLPDFSKVDFDR-D--VVFVWNGTTSGVC 151 (391) Q Consensus 79 ~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~-~--v~~~h~ETstGv~ 151 (391) T Consensus 81 qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~ayv~~~~NeTi~Gv~ 160 (365) T COG1932 81 QFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWDFSDNDAYVHFCWNETISGVE 160 (365) T ss_pred HHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEE T ss_conf 99988886421357505766214576899999864565312320002676679982214667775579993488612157 Q ss_pred ECCEEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH Q ss_conf 03203502568614886401101102545568579997001200176651544567788876541144577831232001 Q gi|254780153|r 152 VPDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391) Q Consensus 152 ~~~~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391) T Consensus 161 v~~~p~~~~~--~~~v~D~SS~ilsr~iDvsk~dviyagaQKnl-GpaGltvvIvr~~~l~r~~~~~----~P~if~y~~ 233 (365) T COG1932 161 VPELPDIGSD--GLLVADASSAILSRPIDVSKYDVIYAGAQKNL-GPAGLTVVIVRPDLLERAESYT----LPSIFDYLT 233 (365) T ss_pred CCCCCCCCCC--CEEEEECCCHHHCCCCCHHHCCEEEEEHHHCC-CCCCEEEEEECHHHHHCCCCCC----CCHHHHCHH T ss_conf 1688988877--60899656277557777567135887621125-7655399998689970113568----961764312 Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE Q ss_conf 12321033478644666448899999999862010318999999997799999998747971676688200365317898 Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK 311 (391) Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~ 311 (391) T Consensus 234 ~------~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~-~~RS~mnV~f~ 306 (365) T COG1932 234 H------ADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAK-ANRSRMNVTFT 306 (365) T ss_pred H------HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH-HHCCCEEEEEE T ss_conf 1------1048842784899999999999999974999999998899899999998727753344552-12153268987 Q ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 247310113734567888999998886282872665567675056861588899999999999999999999 Q gi|254780153|r 312 IVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391) Q Consensus 312 ~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391) T Consensus 307 ~~~~~-----------ld~~fv~eae~~gl~~-lkGhr~vg-GmRasiynA~~~e~veaL~~fm~~f~~~~~ 365 (365) T COG1932 307 LVDAE-----------LDKGFVAEAEAAGLIY-LKGHRSVG-GLRASIYNAVPLEDVEALTDFMDWFEETYK 365 (365) T ss_pred CCCHH-----------HHHHHHHHHHHCCCCE-ECCCCCCC-CEEEEEECCCCHHHHHHHHHHHHHHHHHHC T ss_conf 27377-----------7799999999737741-02664778-616654357788999999999999998609 |
|
| >COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=522.39 Aligned_cols=353 Identities=23% Similarity=0.214 Sum_probs=302.6 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC Q ss_conf 88868887768968999986321036532898899999999999999968899857999748734899987532057897 Q gi|254780153|r 13 RPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG 92 (391) Q Consensus 13 ~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~ 92 (391) T Consensus 6 ~~Ll~PGP~~v~~~-V~~am~~~~~~--h~s~~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgd 81 (383) T COG0075 6 RLLLTPGPVPVPPR-VLLAMARPMVG--HRSPDFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGD 81 (383) T ss_pred CEEEECCCCCCCHH-HHHHHCCCCCC--CCCHHHHHHHHHHHHHHHHHHCCC-CCCEEEECCCCHHHHHHHHHHHCCCCC T ss_conf 52433799888999-99974577777--779889999999999999996688-874799768837999999986058998 Q ss_pred EE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-------CCCEEEEEEECCCCEEECCEEE--ECCCC Q ss_conf 07-99707368888876532387630674057776578676785-------5657997420242022032035--02568 Q gi|254780153|r 93 VD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-------DRDVVFVWNGTTSGVCVPDVGF--IPESR 162 (391) Q Consensus 93 ~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~v~~~h~ETstGv~~~~~~~--~~~~~ 162 (391) T Consensus 82 kVLv~~nG~FG~R~~~ia~~~g-~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~ 160 (383) T COG0075 82 KVLVVVNGKFGERFAEIAERYG-AEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEH 160 (383) T ss_pred EEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHC T ss_conf 6999827807779999999829-966998478888799999999985289950899981157520137699999999972 Q ss_pred CCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCC Q ss_conf 614886401101102545--568579997001200176651544567788876541144577831232001123210334 Q gi|254780153|r 163 EGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF 240 (391) Q Consensus 163 ~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391) T Consensus 161 g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~~~~~~~~~~---~~ylDL~~~~~~~~~~- 236 (383) T COG0075 161 GALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHP---SFYLDLKKWLKYMEKK- 236 (383) T ss_pred CCEEEEEECCCCCCCCCCHHHCCCCEEEECCCHHCCCCCCCCEEEECHHHHHHHHCCCCC---CEEECHHHHHHHHHHC- T ss_conf 988999823457881254444284589976720115898614367779999998558887---6022199999988536- Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC Q ss_conf 78644666448899999999862010318999999997799999998747971676688200365317898247310113 Q gi|254780153|r 241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASL 320 (391) Q Consensus 241 ~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~ 320 (391) T Consensus 237 -~~~p~Tppv~~i~aL~~al~~i~~E-Gle~r~~RH~~~~~a~r~~~~alG-l~~~~-~~~~~s~tvta~~~P~g~~~-- 310 (383) T COG0075 237 -GSTPYTPPVNLIYALREALDLILEE-GLEARIARHRRLAEALRAGLEALG-LELFA-DPERRSPTVTAIKVPEGVDD-- 310 (383) T ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCC-CCCCC-CCCCCCCCEEEEECCCCCCC-- T ss_conf -8988898778999999999999986-579999999999999999999769-84236-86557885489978988772-- Q ss_pred CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 73456788899999888628287266556767505686158889999999999999999999998775 Q gi|254780153|r 321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKISFLR 388 (391) Q Consensus 321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~~~ 388 (391) T Consensus 311 ----~~----~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~~~~ 370 (383) T COG0075 311 ----KK----VRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVKVEA 370 (383) T ss_pred ----HH----HHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC T ss_conf ----99----9999998479996456545576189983575678899999999999999974975436 |
|
| >PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=518.79 Aligned_cols=352 Identities=19% Similarity=0.138 Sum_probs=297.7 Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC Q ss_conf 89988868887768968999986321036532898899999999999999968899857999748734899987532057 Q gi|254780153|r 10 KPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG 89 (391) Q Consensus 10 ~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~ 89 (391) T Consensus 3 ~~~~lL~~PGPt~v~~~-V~~Am~~~~---~~~~~eF~~l~~~~~~~L~~l~~~~~~~~~v~~~gSGT~amEaai~nl~~ 78 (368) T PRK13479 3 ENDPLLLTPGPLTTSRT-TREAMLRDW---GSWDDDFNAITASVRADLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP 78 (368) T ss_pred CCCEEEECCCCCCCCHH-HHHHHCCCC---CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC T ss_conf 89805745899999999-999747577---89877899999999999999957888707999716867999999961547 Q ss_pred CCCEE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-------CCCEEEEEEECCCCEEECCEEE--EC Q ss_conf 89707-99707368888876532387630674057776578676785-------5657997420242022032035--02 Q gi|254780153|r 90 YRGVD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-------DRDVVFVWNGTTSGVCVPDVGF--IP 159 (391) Q Consensus 90 ~~~~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~v~~~h~ETstGv~~~~~~~--~~ 159 (391) T Consensus 79 ~gdkvLv~~~G~FG~R~~~ia~~~g-~~v~~l~~~~g~~~~~~~ve~~L~~~~~~~~v~~vH~ETSTGvln~l~~i~~~~ 157 (368) T PRK13479 79 RDGKVLVPDNGAYGARIAKIAEYLG-IAHVVLDTGEDEPPDAAAVEAALAADPRITHVALVHCETTTGILNPLDEIAAVV 157 (368) T ss_pred CCCEEEEECCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHH T ss_conf 9997999817927999999999819-975998789999889999999997499967899985067720316799999999 Q ss_pred CCCCCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC Q ss_conf 568614886401101102545--568579997001200176651544567788876541144577831232001123210 Q gi|254780153|r 160 ESREGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME 237 (391) Q Consensus 160 ~~~~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391) T Consensus 158 ~~~~~lliVDaVSs~G~~~~~~d~wgiD~~~tgSQK~l~~pPGLs~v~~s~~a~~~~~~~-~~---~~yldl~~~~~--~ 231 (368) T PRK13479 158 KRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSALEACKGN-SR---SLALDLYDQWA--Y 231 (368) T ss_pred HHCCCEEEEECCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHCC-CC---CCCCCHHHHHH--H T ss_conf 854986999702001572110244535699953765145799710122089999987425-88---76636899999--9 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC Q ss_conf 33478644666448899999999862010318999999997799999998747971676688200365317898247310 Q gi|254780153|r 238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI 317 (391) Q Consensus 238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~ 317 (391) T Consensus 232 ~~~~~~~~~Tp~v~li~aL~eaL~~i~~EGgl~~r~~r~~~~~~~~~~~~~~lG-l~~~~-~~~~~s~tvtav~~P~~~~ 309 (368) T PRK13479 232 MEKTGQWRFTPPTHVVAAFYQALLQLEEEGGVPARGARYARNCRTLVAGMRALG-FEPLL-DDEIQSPIIVTFHAPADPA 309 (368) T ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCC-CHHHCCCCEEEEECCCCCC T ss_conf 864499886882899999999999999831889999999999999999999738-76578-9456598679997678856 Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 1137345678889999988862828726655676750568615888999999999999999999999 Q gi|254780153|r 318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391) Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391) T Consensus 310 ~---------d~~~~~~~l~~~g~~i~~G~-~~~~~~fRIGhMG~~~~~di~~~l~ale~~L~~~Gi 366 (368) T PRK13479 310 Y---------DFKEFYERLKEQGFVIYPGK-LTQVDTFRIGCIGAVDAADIRRLVAAIAEALYWMGV 366 (368) T ss_pred H---------HHHHHHHHHHHCCCEEECCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC T ss_conf 3---------59999999997793896885-577897988779999999999999999999998599 |
|
| >cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=496.83 Aligned_cols=344 Identities=22% Similarity=0.211 Sum_probs=292.7 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCE Q ss_conf 88688877689689999863210365328988999999999999999688998579997487348999875320578970 Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGV 93 (391) Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~ 93 (391) T Consensus 1 lL~tPGP~~~~~~-V~~Am~~~~~--~hR~~~F~~~~~~~~~~L~~~~~~~-~~~~v~~~gsgt~a~ea~~~n~~~~~~k 76 (356) T cd06451 1 LLLIPGPSNVPPR-VLKAMNRPML--GHRSPEFLALMDEILEGLRYVFQTE-NGLTFLLSGSGTGAMEAALSNLLEPGDK 76 (356) T ss_pred CCCCCCCCCCCHH-HHHHHCCCCC--CCCCHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCHHHHHHHHHHHCCCCCCC T ss_conf 9775899988899-9998579998--8678899999999999999995899-9848999577089999999852688881 Q ss_pred E-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC------CCCEEEEEEECCCCEEECCEEE--ECCCCCC Q ss_conf 7-99707368888876532387630674057776578676785------5657997420242022032035--0256861 Q gi|254780153|r 94 D-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF------DRDVVFVWNGTTSGVCVPDVGF--IPESREG 164 (391) Q Consensus 94 ~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~v~~~h~ETstGv~~~~~~~--~~~~~~~ 164 (391) T Consensus 77 vlv~~~G~fg~r~~~~a~~~g-~~~~~i~~~~~~~~~~~~v~~~l~~~~~~~v~~~h~etstG~~~~l~~i~~~~~~~~~ 155 (356) T cd06451 77 VLVGVNGVFGDRWADMAERYG-ADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDA 155 (356) T ss_pred EEEEEEEECCCCHHHHHHHCC-CCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCE T ss_conf 478853040541676441159-7239986899997898999988633896589996653651014775889998741572 Q ss_pred EEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCC Q ss_conf 488640110110254556--857999700120017665154456778887654114457783123200112321033478 Q gi|254780153|r 165 LVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCG 242 (391) Q Consensus 165 llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (391) T Consensus 156 ~~~vDavss~g~~~id~~~~giD~~~~ssqK~l~~ppGl~~~~vs~~a~~~~~~~~~--~~~~y~dl~~~~~~--~~~~~ 231 (356) T cd06451 156 LLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTK--PKGFYFDLLLLLKY--WGEGY 231 (356) T ss_pred EEEEECCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHCCC--CCCCCCCHHHHHHH--HHCCC T ss_conf 799725311055650256666059997688644589966899988999999860389--98777798999987--61489 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH Q ss_conf 64466644889999999986201031899999999779999999874797167668820036531789824731011373 Q gi|254780153|r 243 ETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDI 322 (391) Q Consensus 243 ~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~ 322 (391) T Consensus 232 ~~~~Tp~~~~i~al~~AL~~i~~~-G~~~~~~r~~~l~~~l~~~l~~l-Gl~~~~-~~~~~S~~vt~~~~p~g~~----- 303 (356) T cd06451 232 SYPHTPPVNLLYALREALDLILEE-GLENRWARHRRLAKALREGLEAL-GLKLLA-KPELRSPTVTAVLVPEGVD----- 303 (356) T ss_pred CCCCCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHC-CCCCCC-CHHHCCCEEEEEECCCCCC----- T ss_conf 878898806889999999999860-65899999999999999999975-996568-9365498279997999999----- Q ss_pred HHHHHHHHHHHHHH-HHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH Q ss_conf 45678889999988-86282872665567675056861588899999999999999999 Q gi|254780153|r 323 NSQKSFCKSMLSFL-EKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391) Q Consensus 323 ~~~~~~~~~~~~~l-~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391) T Consensus 304 ------~~~~~~~l~~~~~i~i~~g~g~~~~~~fRIg~mG~~~~~di~~~l~al~~~Lk 356 (356) T cd06451 304 ------GDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356) T ss_pred ------HHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHC T ss_conf ------99999999997899997886656895898618989999999999999999859 |
This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway. |
| >KOG2862 consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=447.53 Aligned_cols=358 Identities=18% Similarity=0.170 Sum_probs=298.0 Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 64689988868887768968999986321036532898899999999999999968899857999748734899987532 Q gi|254780153|r 7 PTRKPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS 86 (391) Q Consensus 7 ~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n 86 (391) T Consensus 12 ~m~~p~~~L~gPGPsnl-~~~V~~A~~~~~lg--h~sPe~~qIm~~v~egikyVFkT~n~~t-f~isgsGh~g~E~al~N 87 (385) T KOG2862 12 PMYVPVRTLLGPGPSNL-SGRVQEAMSRPSLG--HMSPEFVQIMDEVLEGIKYVFKTANAQT-FVISGSGHSGWEAALVN 87 (385) T ss_pred CCCCCCCEEECCCCCCC-CHHHHHHHCCCCCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEEECCCCCHHHHHHHH T ss_conf 44578301555787678-77899850677656--6787899999999987899840478962-89836984168998875 Q ss_pred CCCCCCEE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC------CCCEEEEEEECCCCEEECCEE--- Q ss_conf 05789707-99707368888876532387630674057776578676785------565799742024202203203--- Q gi|254780153|r 87 LLGYRGVD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF------DRDVVFVWNGTTSGVCVPDVG--- 156 (391) Q Consensus 87 l~~~~~~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~v~~~h~ETstGv~~~~~~--- 156 (391) T Consensus 88 ~lePgd~vLv~~~G~wg~ra~D-~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g 166 (385) T KOG2862 88 LLEPGDNVLVVSTGTWGQRAAD-CARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISG 166 (385) T ss_pred HCCCCCEEEEEEECHHHHHHHH-HHHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH T ss_conf 2578974999972337778899-998608655587158556754999999987158745999834764111155788887 Q ss_pred EECCCCCCEEEEEECCHHHHCCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH Q ss_conf 50256861488640110110254--5568579997001200176651544567788876541144577831232001123 Q gi|254780153|r 157 FIPESREGLVICDATSAVFARHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391) Q Consensus 157 ~~~~~~~~llivD~vSs~g~~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391) T Consensus 167 ~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~-~~~~~yFd~~~~~~ 245 (385) T KOG2862 167 ELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKT-KPVSFYFDILRLGN 245 (385) T ss_pred HHHHCCCEEEEEECHHHCCCCCCEEHHHCCCEEEECCHHHCCCCCCCCEEECCHHHHHHHHHCCC-CCEEEEEEHHHHCC T ss_conf 87406781899720221478641121106507884243430799985603238889999861457-75489986776103 Q ss_pred HHC-CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC Q ss_conf 210-3347864466644889999999986201031899999999779999999874797167668820036531789824 Q gi|254780153|r 235 VME-GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV 313 (391) Q Consensus 235 ~~~-~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~ 313 (391) T Consensus 246 ~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~ee-GL~~~~~rH~e~s~~l~~~l~~~G-Lq~fv~~e~~rlptvttv~vp 323 (385) T KOG2862 246 FWGCDGEPRAYHHTPPVQLLYSLRAALALIAEE-GLENSWRRHREMSKWLKLSLEALG-LQLFVVDEELRLPTVTTVKVP 323 (385) T ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC-CCCEECCHHHCCCCCEEEECC T ss_conf 205588635111688489999999999999998-789999999999999999999848-610213764526750256547 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHHH Q ss_conf 73101137345678889999988862-8287266556767505686158-8899999999999999999999 Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLGLRVWVGV-TVEKEDLLLLCDWLRWVFYFQK 383 (391) Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~~RIg~~g-~i~~~dv~~L~~aLe~~~~~~k 383 (391) T Consensus 324 ~gvDw-----------~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~~ 384 (385) T KOG2862 324 YGVDW-----------KDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRKK 384 (385) T ss_pred CCCCH-----------HHHHHHHHHHCCEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC T ss_conf 77887-----------99999998716778614667775628999875115772899999999999986416 |
|
| >KOG2790 consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=447.69 Aligned_cols=342 Identities=21% Similarity=0.308 Sum_probs=293.5 Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHC----------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH Q ss_conf 9888688877689689999863210----------365328988999999999999999688998579997487348999 Q gi|254780153|r 12 KRPFFSSGPCAKRPGWSLGILEGAL----------LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVE 81 (391) Q Consensus 12 ~~~~F~pGP~~~~p~~v~~~~~~~~----------l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~e 81 (391) T Consensus 7 ~vvnFaaGPAkl-p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFa 85 (370) T KOG2790 7 RVVNFAAGPAKL-PESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFA 85 (370) T ss_pred CEECCCCCCCCC-CHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC T ss_conf 303057883007-8899999998752667764127774145255788888889999999659975069999578746310 Q ss_pred HHHHHCCC--CC-CEEEEEECCHHHHHHHHHHHCCCCCEEE-EE--CCCCCCCCHHHCCCC---CCEEEEEEECCCCEEE Q ss_conf 87532057--89-7079970736888887653238763067-40--577765786767855---6579974202420220 Q gi|254780153|r 82 MALWSLLG--YR-GVDVLAWESFGLGWMSDIRQLSLQDVRE-FT--APYGSLPDFSKVDFD---RDVVFVWNGTTSGVCV 152 (391) Q Consensus 82 a~~~nl~~--~~-~~~~~~~g~~~~r~~~~~~~~~~~~~~~-~~--~~~g~~~~~~~~~~~---~~v~~~h~ETstGv~~ 152 (391) T Consensus 86 Av~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~da~yvyyCaNETVHGVEf 165 (370) T KOG2790 86 AVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNPDASYVYYCANETVHGVEF 165 (370) T ss_pred HHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCEEECEEC T ss_conf 10022210456884564886630076799987519800671365333467689835425388974799914851421113 Q ss_pred CCEEEECCCCCCEEEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHH Q ss_conf 32035025686148864011011025455685799970012001766515445677888765411445778312320011 Q gi|254780153|r 153 PDVGFIPESREGLVICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKG 232 (391) Q Consensus 153 ~~~~~~~~~~~~llivD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~ 232 (391) T Consensus 166 ~~~P-~~~~~~~vlVaDmSSnflSrpvDvsk~gvi~aGAQKN~-G~aG~Tvvivr~dllg~~~~~-----tP~v~dyk~~ 238 (370) T KOG2790 166 DFIP-VNDPKGAVLVADMSSNFLSRPVDVSKFGVIFAGAQKNV-GPAGVTVVIVRKDLLGNALDI-----TPSVLDYKIM 238 (370) T ss_pred CCCC-CCCCCCCEEEEECCCCHHCCCCCCHHCCEEEECCCCCC-CCCCCEEEEEEHHHHCCCCCC-----CCCCCCCHHH T ss_conf 7888-77889965887633203138754012015886021255-655518999835642565558-----9620222310 Q ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE Q ss_conf 23210334786446664488999999998620103189999999977999999987479716766882003653178982 Q gi|254780153|r 233 GRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI 312 (391) Q Consensus 233 ~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~ 312 (391) T Consensus 239 ------~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri 312 (370) T KOG2790 239 ------DKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRI 312 (370) T ss_pred ------CCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCCCEEE T ss_conf ------26641015998503643366899999736699999887887789999886149868755673442101450684 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 473101137345678889999988862828726655676750568615888999999999999999999 Q gi|254780153|r 313 VDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 313 ~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 313 ~~d~L-------e~eFLkeA----~~~-~mv~LKGhRSVG-GiRASlYNAisv~~~q~L~~~m~-~F~k 367 (370) T KOG2790 313 EKDEL-------EAEFLKEA----AKE-HMVQLKGHRSVG-GIRASLYNAISVEEVQKLAAFMK-EFQK 367 (370) T ss_pred CCHHH-------HHHHHHHH----HHH-HCCCCCCCCCCC-CCHHHHHCCCCHHHHHHHHHHHH-HHHH T ss_conf 63477-------89999999----984-032224654335-34356541322999999999999-9998 |
|
| >TIGR01365 serC_2 phosphoserine aminotransferase; InterPro: IPR006271 These sequences represent a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=408.71 Aligned_cols=372 Identities=63% Similarity=1.101 Sum_probs=358.2 Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC Q ss_conf 89988868887768968999986321036532898899999999999999968899857999748734899987532057 Q gi|254780153|r 10 KPKRPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG 89 (391) Q Consensus 10 ~p~~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~ 89 (391) T Consensus 1 ~P~~P~fssGPCak~PG~~~e~l~~~~lGrshr~~~Gk~~l~~ai~~tr~~l~~P~d~~~Giv~~sdtGa~em~lWs~lG 80 (379) T TIGR01365 1 RPANPEFSSGPCAKRPGYSVEELKNAALGRSHRSKLGKEKLKEAIEKTREVLEVPADYLIGIVPASDTGAVEMALWSLLG 80 (379) T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHC T ss_conf 98988866787667889777875200145046767659999999998789860874214666506662068988998745 Q ss_pred CCCEEEEEECCHHHHHHHHHH-HCCCCCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCEEEE Q ss_conf 897079970736888887653-2387630674057776578676785565799742024202203203502568614886 Q gi|254780153|r 90 YRGVDVLAWESFGLGWMSDIR-QLSLQDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGLVIC 168 (391) Q Consensus 90 ~~~~~~~~~g~~~~r~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~lliv 168 (391) T Consensus 81 ~r~v~~~~~esf~~~W~td~~kqlkl~dv~~l~a~yG~lPd~~k~d~~~d~vf~WnGttsGv~vPn~d~i~~~r~G~t~C 160 (379) T TIGR01365 81 ARGVDLLAWESFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDFKKDVVFTWNGTTSGVRVPNGDFIPADREGLTIC 160 (379) T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCEEEE T ss_conf 78504788712345247777776300124432023467886201353447788874732530146643330126700420 Q ss_pred EECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH-----HHHHHCCCCCCC Q ss_conf 401101102545568579997001200176651544567788876541144577831232001-----123210334786 Q gi|254780153|r 169 DATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK-----GGRVMEGLFCGE 243 (391) Q Consensus 169 D~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 243 (391) T Consensus 161 datsa~fa~~~~~~kldv~tfsWqk~lGGeGahG~lilsPrav~rlesy~PaWPlPk~frlt~~~~~~G~k~~~~if~G~ 240 (379) T TIGR01365 161 DATSAAFAQDLDYEKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKANKDGGGKLSKKIFEGE 240 (379) T ss_pred HHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCC T ss_conf 35678887516732012455311222068875315785646787754168877723666654200123303555542465 Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH Q ss_conf 44666448899999999862010318999999997799999998747971676688200365317898247310113734 Q gi|254780153|r 244 TINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDIN 323 (391) Q Consensus 244 ~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~ 323 (391) T Consensus 241 tintPsml~~ed~l~~l~Wa~s~GGl~~l~~r~~~n~~vl~~~v~k~~W~~~la~~~~~rs~tsvCl~~~dp~~~~~~~~ 320 (379) T TIGR01365 241 TINTPSMLCVEDYLDALKWAESIGGLKALVARADDNLAVLEAFVAKSSWVDFLAETPEIRSNTSVCLKVVDPDVAALDED 320 (379) T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECHHHHHCCHH T ss_conf 32541356577799888777630307899986666899999986334788987503001022216888616144520012 Q ss_pred HHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 5678889999988862828726655676750568615888999999999999999999 Q gi|254780153|r 324 SQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 324 ~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 321 ~~a~f~k~l~~~l~ke~~a~diG~yrdaP~GlriWCGatve~~dl~~l~~W~~Wa~~~ 378 (379) T TIGR01365 321 AQADFAKELVSLLEKEGVAYDIGSYRDAPAGLRIWCGATVEKSDLEALLPWLDWAFAL 378 (379) T ss_pred HHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHC T ss_conf 3679999999886321300002554447886547512421367899999999887614 |
; GO: 0009058 biosynthetic process. |
| >TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase; InterPro: IPR012703 Phosphonates are a class of organophosphorus compounds, characterised by a stable C-P bond, which are found in a variety of biologically produced molecules including antiobiotics, lipids, proteins and polysaccharides | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=398.65 Aligned_cols=344 Identities=19% Similarity=0.153 Sum_probs=289.6 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCC-C Q ss_conf 88688877689689999863210365328988999-999999999999688998-57999748734899987532057-8 Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLG-Y 90 (391) Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~-~ 90 (391) T Consensus 5 lLLTPGPLtT-s~~vk~aMl~D~C---tWD~dYn~~~~~~ir~~L~~la~~~~~~YT~VllQGSGtf~VEA~iGs~~pr~ 80 (366) T TIGR02326 5 LLLTPGPLTT-SKTVKEAMLVDWC---TWDSDYNEDVVESIRQKLLKLATAEEEKYTTVLLQGSGTFAVEAVIGSAVPRK 80 (366) T ss_pred CCCCCCCCCH-HHHHHHHHHCCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCC T ss_conf 5357887630-0688886621045---87155313679999999999860689854678612751255566541124788 Q ss_pred CCEE-EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-------CCCCEEEEEEECCCCEEECCEEE--ECC Q ss_conf 9707-9970736888887653238763067405777657867678-------55657997420242022032035--025 Q gi|254780153|r 91 RGVD-VLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-------FDRDVVFVWNGTTSGVCVPDVGF--IPE 160 (391) Q Consensus 91 ~~~~-~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~v~~~h~ETstGv~~~~~~~--~~~ 160 (391) T Consensus 81 ~~klLv~~NGAYG~R~~~ia~~l~i-~~~~~~~~E~~~~~~~~ve~~L~~dp~ItH~A~vHcETtTGiLNPi~~~~~~~~ 159 (366) T TIGR02326 81 DGKLLVVINGAYGKRIAQIAEYLQI-PHHVVETEENEPTNVVEVEAILAADPAITHVALVHCETTTGILNPIEAVAKVAK 159 (366) T ss_pred CCEEEEEECCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH T ss_conf 9738997178534789999998478-616751587777788999999851897127889836752662112899999998 Q ss_pred CCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC Q ss_conf 68614886401101102545568--5799970012001766515445677888765411445778312320011232103 Q gi|254780153|r 161 SREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG 238 (391) Q Consensus 161 ~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391) T Consensus 160 ~hGk~~ivDAMSSfGgi~idi~~l~~D~LIssanKCi~GVPGfgFviA~~~~L~~~~g------~arSLsLDLydQw~~M 233 (366) T TIGR02326 160 RHGKVTIVDAMSSFGGIPIDIAELDIDYLISSANKCIQGVPGFGFVIAKQAELEKCAG------NARSLSLDLYDQWECM 233 (366) T ss_pred HCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC------CCCHHHHHHHHHHHHH T ss_conf 5597799853411376001164325676352347813376843667768999986204------3210235489999996 Q ss_pred C-CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC Q ss_conf 3-478644666448899999999862010318999999997799999998747971676688200365317898247310 Q gi|254780153|r 239 L-FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI 317 (391) Q Consensus 239 ~-~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~ 317 (391) T Consensus 234 ~~~~GkWRFTsPTHvV~Af~qAL~el~~EGGv~aR~~RY~~nq~~L~~~m~~LG-F~~ll-~~~~~sPIItsF~~P~~~~ 311 (366) T TIGR02326 234 EKQHGKWRFTSPTHVVHAFAQALLELEKEGGVEARYQRYQSNQKLLVAGMRALG-FEPLL-DDELQSPIITSFYSPEDPD 311 (366) T ss_pred HCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC-CCCCC-CHHHCCCEEEEEECCCCCC T ss_conf 448996221772689999999999998458974578999999999999998615-51147-5434588689850778897 Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH Q ss_conf 113734567888999998886282872665567675056861588899999999999999999 Q gi|254780153|r 318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391) Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391) T Consensus 312 y~---------F~~fY~~lk~~GFviYPGKv-s~~~~FRiG~IG~V~~~di~~l~~~I~~~~~ 364 (366) T TIGR02326 312 YR---------FADFYQRLKEQGFVIYPGKV-SQVDTFRIGNIGDVDAADIERLVTAIGKALY 364 (366) T ss_pred CH---------HHHHHHHHHHCCCEECCCCC-CCCCCEECCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 13---------89999999767817627610-4566211167676388999999999998750 |
The functions of these molecules include phosphorus storage, cell communication, host recognition and chemical warfare. 2-Aminoethylphosphonate (AEP), the most common naturally occurring phosphonate, is an important precursor used in the biosynthesis of phosphonolipids, phosphonoproteins, and phosphonoglycans. This entry represents 2-aminoethylphosphonate-pyruvate transaminase (AEPT)(2.6.1.37 from EC) which catalyses the interconversion of AEP and phosphonoacetaldehyde (P-Ald), coupled with the interconversion of pryuvate and L-alanine. In some bacterial species this is the first step in an AEP degradation pathway which allows them to utilise this compound as a source of carbon, nitrogen and phosphorus. Phosphonoacetaldeyhde hydrolase, often encoded by an adjacent gene, then converts P-Ald to acetaldehyde and phosphate.Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lyase complex as found in Escherichia coli. The crystal structure of AEPT from Salmonella typhimurium has been studied to 2.2 A resolution . The protein is a homodimer where each subunit is composed of two domains, large and small. The large domain forms an alpha-beta complex characteristic of the aspartate transaminase family, while the small domain is comosed of highly twisted beta strands. The active site contains a pyridoxal 5'-phosphate cofactor and is found at the domain interface, being composed of residues from both subunits.. |
| >TIGR01366 serC_3 phosphoserine aminotransferase, putative; InterPro: IPR006272 These sequences represent a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=367.20 Aligned_cols=355 Identities=23% Similarity=0.330 Sum_probs=316.8 Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHH---HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 899888688877689689999863---21036532898899999999999999968899857999748734899987532 Q gi|254780153|r 10 KPKRPFFSSGPCAKRPGWSLGILE---GALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS 86 (391) Q Consensus 10 ~p~~~~F~pGP~~~~p~~v~~~~~---~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n 86 (391) T Consensus 1 ~P~dGrfG~GPskvr~e~-~~~~~~~~~~~~Gtshrq~~vkn~vG~~r~G~~~lf~lP~Gye~il~~GG~tafWd~a~~G 79 (362) T TIGR01366 1 KPADGRFGAGPSKVRLEQ-LQALVATAASLLGTSHRQAPVKNLVGKVREGLAELFSLPDGYEVILGNGGATAFWDAATFG 79 (362) T ss_pred CCCCCCCCCCCCCCCHHH-HHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH T ss_conf 989886458732001888-9988721111000210201467777678887899840888607876178731456666653 Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHCCC-CCEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCEEECCEEEECCCCCCE Q ss_conf 0578970799707368888876532387-630674057776578676785565799742024202203203502568614 Q gi|254780153|r 87 LLGYRGVDVLAWESFGLGWMSDIRQLSL-QDVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSGVCVPDVGFIPESREGL 165 (391) Q Consensus 87 l~~~~~~~~~~~g~~~~r~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstGv~~~~~~~~~~~~~~l 165 (391) T Consensus 80 li~~~s~hl-~~Gefs~kfa~a~~~~P~~~eP~~~~~~~G~~P~~~~~~~~dv~~~~hnetstG~~~~~~r~~G~~~~~l 158 (362) T TIGR01366 80 LIEKKSLHL-SFGEFSSKFAKAAKLAPWLDEPEIVTADPGDAPEPQAEEGVDVIAWAHNETSTGVAVPVRRPEGSDEGAL 158 (362) T ss_pred HHHHCCCCC-CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEE T ss_conf 343111211-0003567887765407642487477327888853000045315675124544532677640357888407 Q ss_pred EEEEECCHHHHCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCC-CCCCCHHHCCHHHHHHCCCCCCCC Q ss_conf 8864011011025455685799970012001766515445677888765411445-778312320011232103347864 Q gi|254780153|r 166 VICDATSAVFARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPS-WPLPKIFRMVKGGRVMEGLFCGET 244 (391) Q Consensus 166 livD~vSs~g~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 244 (391) T Consensus 159 v~~datsGaGGlPvdi~~~d~yyf~Pqk~fasdGGlW~~~~sPaa~~r~e~~~a~~r~~P~fl~l~~---a~~ns~knqt 235 (362) T TIGR01366 159 VVIDATSGAGGLPVDIKETDVYYFAPQKSFASDGGLWLAVMSPAALERIEKIAASGRFVPEFLSLPT---AVDNSLKNQT 235 (362) T ss_pred EEEECCCCCCCCCEEECCCCEEEECCCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHH---HHHHHHHCCC T ss_conf 9997467888752000026135523542212355302315255889988876522563402433577---8765441123 Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH Q ss_conf 46664488999999998620103189999999977999999987479716766882003653178982473101137345 Q gi|254780153|r 245 INTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINS 324 (391) Q Consensus 245 ~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~ 324 (391) T Consensus 236 yntPa~atl~ll~~q~~W~~~~GGld~~~~rt~~ss~~ly~Wa~~~~~~~P~v~d~~~rs~v~Gtidf~d~~d------- 308 (362) T TIGR01366 236 YNTPAVATLLLLDEQVDWLNGNGGLDFAVARTKDSSSRLYSWAEEREYATPFVADPAKRSQVVGTIDFSDDID------- 308 (362) T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCC------- T ss_conf 3517999999999888886338871054565578899998776410246861005333303676640244400------- Q ss_pred HHHHHHHHHHHHHHCCEEECCCCCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 67888999998886282872665567675-0568615888999999999999999999 Q gi|254780153|r 325 QKSFCKSMLSFLEKEEIAYDIGSYRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 325 ~~~~~~~~~~~l~~~g~~~~~~~~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 309 -----a~~~ak~lranGi~dtePyrklGrnqlr~~mfPa~~~~dv~~lt~~~d~~~~~ 361 (362) T TIGR01366 309 -----AAVVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPADVEALTECVDFVVEK 361 (362) T ss_pred -----HHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC T ss_conf -----78999998745721365012414100124430565867899999888888616 |
; GO: 0009058 biosynthetic process. |
| >TIGR01979 sufS cysteine desulfurases, SufS subfamily; InterPro: IPR010970 Cysteine desulphurases are pyridoxal-phosphate enzymes which catalyse the removal of sulphur from L-cysteine to form L-alanine and elemental sulphur | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=254.35 Aligned_cols=349 Identities=17% Similarity=0.182 Sum_probs=278.8 Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCC---CC-----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 86888776896899998632103653---28-----98899999999999999968899857999748734899987532 Q gi|254780153|r 15 FFSSGPCAKRPGWSLGILEGALLGRS---HR-----CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS 86 (391) Q Consensus 15 ~F~pGP~~~~p~~v~~~~~~~~l~~s---HR-----s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n 86 (391) T Consensus 22 YLDsAAT~QKP~~Vida~~~yY~~~nANVHRG~H~Ls~~AT~~YE~~R~kva~FiNA~~~~EIvF-T~gtTe~iNLvA~s 100 (409) T TIGR01979 22 YLDSAATSQKPQAVIDAVEEYYRKSNANVHRGIHTLSVRATEAYEEAREKVAKFINAASAEEIVF-TRGTTESINLVAYS 100 (409) T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE-ECCCCHHHHHHHHH T ss_conf 73485100284779999999987516700168999999999999999999998508899854787-07602788999998 Q ss_pred C----CCC----CCEEEEEE-CCHHH--HHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCE Q ss_conf 0----578----97079970-73688--8887653238763067405777657867678-----5565799742024202 Q gi|254780153|r 87 L----LGY----RGVDVLAW-ESFGL--GWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGV 150 (391) Q Consensus 87 l----~~~----~~~~~~~~-g~~~~--r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv 150 (391) T Consensus 101 ~g~~~l~~av~pGDeIv~s~mEHHaNiVPW-Q~l~~r~GA~lk~~~l~~~G~ld~~~l~~~~~~~TKlVa~~HvSNVlGt 179 (409) T TIGR01979 101 WGRSRLKAAVDPGDEIVISEMEHHANIVPW-QLLAERTGATLKFIPLDDDGTLDLDDLEELLTEKTKLVAITHVSNVLGT 179 (409) T ss_pred HCCCCCHHHCCCCCEEEECCHHHHCCHHHH-HHHHHHHCCEEEEEECCCCCEEEHHHHHHHHHCCCEEEEEEEEECCCCC T ss_conf 311013425389887984011100121479-9999760987899744887605188899883269829999742022030 Q ss_pred EECCEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCH Q ss_conf 2032035--02568614886401101102545568--5799970012001766515445677888765411445778312 Q gi|254780153|r 151 CVPDVGF--IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKI 226 (391) Q Consensus 151 ~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391) T Consensus 180 vnP~~ei~~~AH~~GA~vlvDGAQ~~pH~pvDv~~ldcDFyvFSGHK-myGPtGiGVLYGK~~lLe~MPPf~gGG~MI~~ 258 (409) T TIGR01979 180 VNPVEEIIKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHK-MYGPTGIGVLYGKEELLEEMPPFLGGGEMIEE 258 (409) T ss_pred CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECCH-HHCCCCCEEEHHHHHHHHHCCCCCCCCCEEEE T ss_conf 14878999998657976998625575898988565578744561004-52576630112788988647784669861578 Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC Q ss_conf 32001123210334786446664488999999998620103189999999977999999987479716766882003653 Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT 306 (391) Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~ 306 (391) T Consensus 259 V~~~~g~ty~~~P~KFE-AGTPniagviGLgaAidYl~~i-G~~~I~~~E~~L~~yal~~L~~ipg~~iyGP~~~~~R~g 336 (409) T TIGR01979 259 VSLEEGTTYNEAPHKFE-AGTPNIAGVIGLGAAIDYLEKI-GLEKIEAHEKELTAYALERLGEIPGLRIYGPRDAEDRGG 336 (409) T ss_pred EEECCCCEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC T ss_conf 88057711367875456-8883589999999999998523-878999999999999999960189858746877432643 Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC--------CEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 1789824731011373456788899999888628287266556767--------50568615888999999999999999 Q gi|254780153|r 307 SICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP--------LGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391) Q Consensus 307 ~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~--------~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391) T Consensus 337 ~isFn~~g~H------------pHDVg~~LD~~GiAvR~GHHCAqPlm~~~~v~atcRASf~~YNT~ediD~Lv~aL~~v 404 (409) T TIGR01979 337 IISFNVEGVH------------PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYLYNTEEDIDALVEALKKV 404 (409) T ss_pred EEEECCCCCC------------CCHHHHHCCCCCCEEEECCHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHH T ss_conf 3330258887------------0022301226775686170532489865599636788741038989999999999999 Q ss_pred HH Q ss_conf 99 Q gi|254780153|r 379 FY 380 (391) Q Consensus 379 ~~ 380 (391) T Consensus 405 ~~ 406 (409) T TIGR01979 405 RK 406 (409) T ss_pred HH T ss_conf 98 |
These enzymes have been shown to play an important role in the biosynthesis of iron-sulphur clusters, thionucleosides in tRNA, thiamine, biotin, lipoate and molydopterin This entry represents a subfamily of NifS-related cysteine desulphurases that are often involved in iron-sulphur cluster formation, which is needed for nitrogen fixation and other vital functions . Many of these enzymes, in addition to cysteine desulphurase activity, also show selenocysteine lyase activity where L-selenocysteine is converted to L-alanine and selenide . Some of these enzymes are much more specific for selenocysteine than cysteine and are thus believed to function in selenium metabolism rather than sulphur metabolism. Structural studies of the E. coli and Synechocystis enzymes indicate that they are homodimers which show a similar fold to other members of the alpha family of pyridoxal-phosphate enzymes .; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process. |
| >pfam00266 Aminotran_5 Aminotransferase class-V | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=246.38 Aligned_cols=337 Identities=19% Similarity=0.183 Sum_probs=248.2 Q ss_pred CCCCCCCCHHHHHHHHHHHCCC--------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC- Q ss_conf 8887768968999986321036--------5328988999999999999999688998579997487348999875320- Q gi|254780153|r 17 SSGPCAKRPGWSLGILEGALLG--------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL- 87 (391) Q Consensus 17 ~pGP~~~~p~~v~~~~~~~~l~--------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl- 87 (391) T Consensus 5 ~aattp~~~~-V~~~~~~~~~~~~~np~s~~~~~~~~~~~~~e~aR~~ia~~lga~~~~~i~ft-~~~Te~~n~~~~~~~ 82 (371) T pfam00266 5 SAATTQKPQA-VLDALQEYYTDYNGNVHRGVHHLGKEATQAYEEAREKVAEFINAPSDEEIIFT-SGTTEAINLVAISLG 82 (371) T ss_pred CCCCCCCCHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC-CCHHHHHHHHHHHHH T ss_conf 8123689999-99999999986488856521499999999999999999997193998979984-887899887652345 Q ss_pred --CCCCCEEEEEE-CCHHHHH-HHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE- Q ss_conf --57897079970-7368888-8765323876306740577765786767-----855657997420242022032035- Q gi|254780153|r 88 --LGYRGVDVLAW-ESFGLGW-MSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF- 157 (391) Q Consensus 88 --~~~~~~~~~~~-g~~~~r~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~- 157 (391) T Consensus 83 ~~~~~gd~ii~s~~eh~s~~~~~~~l~~~~g~~v~~i~~~~~g~i~~~~l~~~i~~~t~lv~~~~v~n~tG~~~pi~~i~ 162 (371) T pfam00266 83 RRLKPGDEILVTEMEHHANLVPWQELAKRTGATVRVIPVDPNGLLDLDALEKLLTPRTKLVAITHVSNVTGTVNPVEEIG 162 (371) T ss_pred HCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEECHHHHHH T ss_conf 31499899999547755236599998762495699935698986989999985689964999967667788240555699 Q ss_pred -ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH Q ss_conf -0256861488640110110254556--8579997001200176651544567788876541144577831232001123 Q gi|254780153|r 158 -IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391) Q Consensus 158 -~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391) T Consensus 163 ~~~~~~g~~~~vDa~q~~g~~~id~~~~g~D~~~~s~hK-~~GP~G~G~L~v~~~~~~~l~p~~~g~~~~~~~~~~~~~~ 241 (371) T pfam00266 163 KLAHEYGALVVVDAAQAVGHRPIDVQALGVDFLAFSGHK-LYGPTGIGVLYGRRDLLEKLPPWKGGGGMIDLVSLLQETT 241 (371) T ss_pred HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC-CCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCC T ss_conf 998636917998751236752203232436569986555-6899843999981577845787567998435654222355 Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898247 Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVD 314 (391) Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391) T Consensus 242 ~~~~~~-~~e~GT~n~~~~~~l~~al~~~~~~-g~~~i~~~~~~L~~~l~~~L~~~~~~~i~~-~~~~~~~~ivsf~~~~ 318 (371) T pfam00266 242 FADAPS-KFEAGTPNIAGIIGLGAALDYLAEI-GLEAIEKHERELAAYLYERLLAIPGIRLVP-AVAERRPSIISFNFPG 318 (371) T ss_pred CCCCHH-HHCCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCCEEEEEECC T ss_conf 456144-4047899878899999999999981-989999999999999999985599989949-8624668889999599 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--------CCCEEEEECCCCCCHHHHHHH Q ss_conf 310113734567888999998886282872665567--------675056861588899999999 Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--------APLGLRVWVGVTVEKEDLLLL 371 (391) Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--------~~~~~RIg~~g~i~~~dv~~L 371 (391) T Consensus 319 ~~------------~~~~~~~L~~~gI~vs~G~~Cs~~~l~~~~~~g~iRiS~~~ynT~eeId~L 371 (371) T pfam00266 319 VH------------PHDVATLLDERGIAVRSGHHCAQPLMERLGVHGTLRASLYFYNTEEEVDRL 371 (371) T ss_pred CC------------HHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHCC T ss_conf 09------------999999973488199764000324448767998899976887999998259 |
This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. |
| >PRK09295 selenocysteine lyase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-31 Score=216.62 Aligned_cols=346 Identities=14% Similarity=0.151 Sum_probs=242.5 Q ss_pred CCC-CCCCCCCHHHHHHHHHHHCCC---CCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH Q ss_conf 868-887768968999986321036---53289-----889999999999999996889985799974873489998753 Q gi|254780153|r 15 FFS-SGPCAKRPGWSLGILEGALLG---RSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW 85 (391) Q Consensus 15 ~F~-pGP~~~~p~~v~~~~~~~~l~---~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~ 85 (391) T Consensus 26 YlDnaAtt~~-p~~Vi~a~~~~~~~~~~n~~~~~~~~~~~a~~~~e~aR~~iA~~lga~~~~eIvF-ts~~Tea~N~~~~ 103 (406) T PRK09295 26 YLDSAASAQK-PSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQASLFINARSAEELVF-VRGTTEGINLVAN 103 (406) T ss_pred EECCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCCHHHHHHHHH T ss_conf 9528853789-9999999999998656988864138999999999999999999749999896999-3781699888886 Q ss_pred HC----CCCCCEEEEEECCHHH---HHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEEC Q ss_conf 20----5789707997073688---888765323876306740577765786767-----85565799742024202203 Q gi|254780153|r 86 SL----LGYRGVDVLAWESFGL---GWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVP 153 (391) Q Consensus 86 nl----~~~~~~~~~~~g~~~~---r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~ 153 (391) T Consensus 104 ~~~~~~~~~gd~vi~s~~EH~s~~~pw~-~l~~~~G~~v~~vp~~~~g~id~~~l~~~i~~~T~LVsv~~vsn~~G~i~p 182 (406) T PRK09295 104 SWGNSNVRAGDNIIISEMEHHANIVPWQ-MLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENP 182 (406) T ss_pred HHHHHHCCCCCEEEEECCCCHHHHHHHH-HHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCC T ss_conf 6688605898989994664287888999-999964962489803899848599999875379639999713678887178 Q ss_pred CEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC Q ss_conf 2035--02568614886401101102545568--5799970012001766515445677888765411445778312320 Q gi|254780153|r 154 DVGF--IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391) Q Consensus 154 ~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391) T Consensus 183 v~~I~~~~~~~g~~~~vDaaQ~~g~~~idv~~l~~D~~~~S~HK-l~GP~G~G~Lyv~~~~~~~l~P~~~GG~~~~~~~~ 261 (406) T PRK09295 183 LAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHK-LYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSL 261 (406) T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHCCEEEEEHHH-CCCCCCEEEEEECHHHHHHCCCCCCCCCCEEEECC T ss_conf 99999988755854896423466810554666315479986142-26998149999833456317863168863110034 Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE Q ss_conf 01123210334786446664488999999998620103189999999977999999987479716766882003653178 Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC 309 (391) Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~ 309 (391) T Consensus 262 ~~~~~~~~~p~rf-e~GT~n~~~i~gl~aAl~~~~~~-g~~~i~~~~~~L~~~l~~~L~~~~~v~~~g--p~~r~-~ivs 336 (406) T PRK09295 262 TEGTTWAKAPWRF-EAGTPNTGGIIGLGAALDYVSAL-GLNNIAEYEQNLMHYALSQLEQVPDLTLYG--PQNRL-GVIA 336 (406) T ss_pred CCCCCCCCCCHHC-CCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHCCCCEEEEC--CCCCC-EEEE T ss_conf 5675535652220-58887688999999999999971-889999999999999999973699989958--87755-0799 Q ss_pred EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 98247310113734567888999998886282872665567--------6750568615888999999999999999999 Q gi|254780153|r 310 MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--------APLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--------~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 337 f~~~~~~------------~~~v~~~L~~~gI~vr~G~~Ca~~~~~~~~~~~~iRvS~~~ynT~eeId~lv~aL~~I~k~ 404 (406) T PRK09295 337 FNLGKHH------------AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHRL 404 (406) T ss_pred EECCCCC------------HHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH T ss_conf 9738989------------9999999854998997634333044576289967999788999999999999999999997 |
|
| >PRK10874 cysteine sulfinate desulfinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-31 Score=214.96 Aligned_cols=355 Identities=15% Similarity=0.167 Sum_probs=248.0 Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH Q ss_conf 646899888688877689689999863210---3653289-----88999999999999999688998579997487348 Q gi|254780153|r 7 PTRKPKRPFFSSGPCAKRPGWSLGILEGAL---LGRSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG 78 (391) Q Consensus 7 ~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~---l~~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~ 78 (391) T Consensus 14 P~l~~~~iYlD~Aatt~~p~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~e~aR~~iA~llga~~~~eI~f-ts~~Te 92 (401) T PRK10874 14 PALQDAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDAKNIVW-TRGTTE 92 (401) T ss_pred CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHH T ss_conf 3779994897487526899999999999998644898864108999999999999999999829699897999-796589 Q ss_pred HHHHHHHHC----CCCCCEEEEEECCHHH---HHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEEC Q ss_conf 999875320----5789707997073688---888765323876306740577765786767-----8556579974202 Q gi|254780153|r 79 AVEMALWSL----LGYRGVDVLAWESFGL---GWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGT 146 (391) Q Consensus 79 ~~ea~~~nl----~~~~~~~~~~~g~~~~---r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ET 146 (391) T Consensus 93 ~~n~~~~~~~~~~~~~gd~vv~s~~Eh~s~~~pw~~~~~~~g-~~v~~~p~~~~g~~d~~~l~~~i~~~T~lVai~~vsn 171 (401) T PRK10874 93 SINMVAQCYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTG-AKVVKLPLGADRLPDVDLLPELITPRSRILALGQMSN 171 (401) T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCC T ss_conf 999999999997358998388704413541589999998539-6369941588887599999998558965999979667 Q ss_pred CCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC Q ss_conf 42022032035--0256861488640110110254556--8579997001200176651544567788876541144577 Q gi|254780153|r 147 TSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP 222 (391) Q Consensus 147 stGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~ 222 (391) T Consensus 172 ~~G~~~pv~~I~~~~~~~g~~~~vDa~Q~~g~~~idv~~l~vD~l~~S~HK-l~GP~G~G~Lyv~~~~~~~l~P~~~Gg~ 250 (401) T PRK10874 172 VTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQQLDIDFYAFSGHK-LYGPTGIGVLYGKSELLEAMSPWLGGGK 250 (401) T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCEEEEECHH-CCCCCCEEEEEECCCHHHHCCCEECCCC T ss_conf 886557699999999764977997530137742546678439889987033-1699814999985303642786535875 Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200 Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391) Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391) T Consensus 251 ~~~~~~~~~~~-~-~~~~~r~e~GT~n~~~i~~l~aal~~l~~~-~~~~~~~~~~~L~~~~~~~L~~~~g~~~~~~-~-- 324 (401) T PRK10874 251 MLTEVSFDGFT-P-QSAPWRLEAGTPNVAGVIGLSAALEWLADI-DIEQAESWSRSLATLAEDALAKRPGFRSFRC-Q-- 324 (401) T ss_pred CCCCCCCCCCC-C-CCCCHHCCCCCCHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-C-- T ss_conf 40023467654-2-555000257783288999999999999963-9999999999999999999852899653479-9-- Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC--------CCEEEEECCCCCCHHHHHHHHHH Q ss_conf 3653178982473101137345678889999988862828726655676--------75056861588899999999999 Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA--------PLGLRVWVGVTVEKEDLLLLCDW 374 (391) Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~--------~~~~RIg~~g~i~~~dv~~L~~a 374 (391) T Consensus 325 -~~~i~sf~~~gi~------------~~~l~~~L~~~gi~v~~g~~ca~~~l~alg~~g~iRvS~~~ynT~~dId~li~a 391 (401) T PRK10874 325 -DSSLLAFDFAGVH------------HSDMVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNA 391 (401) T ss_pred -CCCEEEEEECCCC------------HHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH T ss_conf -9988999879959------------999999997789789618534289999859999799965888899999999999 Q ss_pred HHHHHHHHH Q ss_conf 999999999 Q gi|254780153|r 375 LRWVFYFQK 383 (391) Q Consensus 375 Le~~~~~~k 383 (391) T Consensus 392 l~~~v~~lr 400 (401) T PRK10874 392 VDRALELLV 400 (401) T ss_pred HHHHHHHHC T ss_conf 999999830 |
|
| >TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-30 Score=212.97 Aligned_cols=355 Identities=15% Similarity=0.171 Sum_probs=247.0 Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH Q ss_conf 6468998886888776896899998632103---653289-----88999999999999999688998579997487348 Q gi|254780153|r 7 PTRKPKRPFFSSGPCAKRPGWSLGILEGALL---GRSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTG 78 (391) Q Consensus 7 ~~~~p~~~~F~pGP~~~~p~~v~~~~~~~~l---~~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~ 78 (391) T Consensus 11 P~l~~~~iYlDnAatt~~p~~V~~a~~~~~~~~~~n~~~s~~~~~~~~~~~~e~aR~~iA~~lga~~~~~Iif-ts~~Te 89 (398) T TIGR03392 11 PALQDGTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVW-TRGTTE 89 (398) T ss_pred CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHH T ss_conf 4889990886786326898999999999998634888751439999999999999999999709599897999-587799 Q ss_pred HHHHHHHHC----CCCCCEEEEEECCHH---HHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEEC Q ss_conf 999875320----578970799707368---8888765323876306740577765786767-----8556579974202 Q gi|254780153|r 79 AVEMALWSL----LGYRGVDVLAWESFG---LGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGT 146 (391) Q Consensus 79 ~~ea~~~nl----~~~~~~~~~~~g~~~---~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ET 146 (391) T Consensus 90 ~~n~~~~~~~~~~~~~gd~ii~s~~EH~s~~~pw~~~~~~~g-~~v~~~~~~~~~~~d~~~l~~~i~~~T~lVsi~~vsn 168 (398) T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTG-AKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSN 168 (398) T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCC T ss_conf 999898776887239989899824400342389998876448-5279961478898799999985257870899825556 Q ss_pred CCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC Q ss_conf 42022032035--0256861488640110110254556--8579997001200176651544567788876541144577 Q gi|254780153|r 147 TSGVCVPDVGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP 222 (391) Q Consensus 147 stGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~ 222 (391) T Consensus 169 ~~G~i~pi~~I~~~~~~~g~~~~vDa~Q~~g~~~idv~~~~~D~~~~S~hK-l~GP~G~G~Ly~~~~~~~~l~p~~~Gg~ 247 (398) T TIGR03392 169 VTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHK-LYGPTGIGVLYGKTELLEAMPPWQGGGK 247 (398) T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC-CCCCCCEEEEEECCHHHHHCCCCCCCCC T ss_conf 788858799999999865974786334115620334102678779986553-5699841899984114743797357997 Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200 Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391) Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391) T Consensus 248 ~~~~~~~~~~~-~-~~~~~r~e~GT~n~~~i~gl~~al~~l~~~-~~~~~~~~~~~L~~~~~~~l~~l~g~~~~~~-~-- 321 (398) T TIGR03392 248 MLSHVSFDGFI-P-QAVPHRFEAGTPNIAGVIGLSAALEWLTDI-DIAAAEAWSVSLADLAEERLAQLPGFRSFRC-P-- 321 (398) T ss_pred CCCCCCCCCCC-C-CCCCHHCCCCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-C-- T ss_conf 34433477764-4-555021146885487899999999999964-9999999999999999999863899644579-9-- Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC--------CCEEEEECCCCCCHHHHHHHHHH Q ss_conf 3653178982473101137345678889999988862828726655676--------75056861588899999999999 Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA--------PLGLRVWVGVTVEKEDLLLLCDW 374 (391) Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~--------~~~~RIg~~g~i~~~dv~~L~~a 374 (391) T Consensus 322 -~~~~~~f~~~~~~------------~~~l~~~L~~~gi~v~~G~~ca~~~l~a~g~~g~iRvS~~~ynT~edId~li~a 388 (398) T TIGR03392 322 -GSSLLAFDFAGVH------------HSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDA 388 (398) T ss_pred -CCCEEEEEECCCC------------HHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH T ss_conf -9967999879939------------999999997789799668665489999868998799967888899999999999 Q ss_pred HHHHHHHHH Q ss_conf 999999999 Q gi|254780153|r 375 LRWVFYFQK 383 (391) Q Consensus 375 Le~~~~~~k 383 (391) T Consensus 389 L~~~l~~l~ 397 (398) T TIGR03392 389 VGAALELLN 397 (398) T ss_pred HHHHHHHHC T ss_conf 999999843 |
Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems. |
| >COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-31 Score=215.21 Aligned_cols=348 Identities=17% Similarity=0.193 Sum_probs=256.1 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCC---CCCCCC-----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH Q ss_conf 886888776896899998632103---653289-----889999999999999996889985799974873489998753 Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGALL---GRSHRC-----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW 85 (391) Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~l---~~sHRs-----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~ 85 (391) T Consensus 24 vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvf-t~~tT~aln~va~ 102 (405) T COG0520 24 VYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVF-TRGTTEALNLVAR 102 (405) T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE-ECCHHHHHHHHHH T ss_conf 763676566678899999999999740245755441279999999999999999819998772999-5983799999999 Q ss_pred HC---CCCCCEEEEEECCHH---HHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECC Q ss_conf 20---578970799707368---8888765323876306740577765786767-----855657997420242022032 Q gi|254780153|r 86 SL---LGYRGVDVLAWESFG---LGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPD 154 (391) Q Consensus 86 nl---~~~~~~~~~~~g~~~---~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~ 154 (391) T Consensus 103 ~l~~~~~~gdeIv~s~~EH~sn~~pw-~~~~~~~Ga~v~~i~~~~~g~~~~d~~~~~i~~~Tklvais~vSn~tG~~~pv 181 (405) T COG0520 103 GLGRSLKPGDEIVVSDLEHHSNIVPW-QELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPV 181 (405) T ss_pred HHHHHHCCCCEEEEECCCCCCCHHHH-HHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCH T ss_conf 70241068998998046552008999-99998759689998418999728899986469994499996641675540409 Q ss_pred EEE--ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC Q ss_conf 035--0256861488640110110254556--857999700120017665154456778887654114457783123200 Q gi|254780153|r 155 VGF--IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV 230 (391) Q Consensus 155 ~~~--~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~ 230 (391) T Consensus 182 ~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~ 261 (405) T COG0520 182 KEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRD 261 (405) T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCEEECCCC T ss_conf 99999999849989997713347566885561898999767432579985299998665584378977788724401445 Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE Q ss_conf 11232103347864466644889999999986201031899999999779999999874797167668820036531789 Q gi|254780153|r 231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391) Q Consensus 231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391) T Consensus 262 ~~~~~~~~p~r-fe~gTpn~~~~i~l~aAl~~~~~i-g~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r-~~~vsF 338 (405) T COG0520 262 EGVTLAELPLR-FEAGTPNIAGAIGLAAALDYLLEI-GMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADR-GGIVSF 338 (405) T ss_pred CCCEECCCHHH-CCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-CCEEEE T ss_conf 55301564153-155784378898699999999985-799999999999999999985489849964663467-746999 Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC--------CCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 82473101137345678889999988862828726655676--------750568615888999999999999999 Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA--------PLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391) Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~--------~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391) T Consensus 339 ~v~~~------------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~ 402 (405) T COG0520 339 NVKGI------------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKA 402 (405) T ss_pred EECCC------------CHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHH T ss_conf 97895------------98999999986786998256443267875377775799974259999999999999987 |
|
| >cd06453 SufS_like Cysteine desulfurase (SufS)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-30 Score=209.54 Aligned_cols=338 Identities=14% Similarity=0.132 Sum_probs=234.9 Q ss_pred CCCCCCCHHHHHHHHHHHCC---CCCCC-----CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC- Q ss_conf 88776896899998632103---65328-----9889999999999999996889985799974873489998753205- Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALL---GRSHR-----CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL- 88 (391) Q Consensus 18 pGP~~~~p~~v~~~~~~~~l---~~sHR-----s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~- 88 (391) T Consensus 6 aatt~~~~~-V~~~~~~~~~~~~~np~~~~~~~~~~a~~~le~aR~~ia~~lg~~~~~eI~f-ts~aTea~n~~~~~l~~ 83 (373) T cd06453 6 AATSQKPQP-VIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIF-TRNTTEAINLVAYGLGR 83 (373) T ss_pred CCCCCCCHH-HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-CCCHHHHHHHHHHHHHH T ss_conf 764689999-9999999999758998730509999999999999999999749699897999-18867998788653020 Q ss_pred --CCCCEEEEEECCHHH-H-HHHHHHHCCCCCEEEEECCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE-- Q ss_conf --789707997073688-8-88765323876306740577765786767-----855657997420242022032035-- Q gi|254780153|r 89 --GYRGVDVLAWESFGL-G-WMSDIRQLSLQDVREFTAPYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF-- 157 (391) Q Consensus 89 --~~~~~~~~~~g~~~~-r-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~-- 157 (391) T Consensus 84 ~~~~gd~Vi~s~~EH~s~~~p~~~la~~~G~~v~~ip~~~~G~i~~~~l~~~i~~~T~lV~~~~v~n~tG~~~pi~~I~~ 163 (373) T cd06453 84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGE 163 (373) T ss_pred CCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHH T ss_conf 26999989976011124278999998705958985078978858899999754589569999785667760887999999 Q ss_pred ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH Q ss_conf 0256861488640110110254556--85799970012001766515445677888765411445778312320011232 Q gi|254780153|r 158 IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391) Q Consensus 158 ~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391) T Consensus 164 ~~~~~g~~~~vDa~Qa~g~~~idv~~~~~D~~~~s~hK-~~GP~G~G~Lyv~~~~~~~l~p~~~gg~~~~~~~~~~~-~~ 241 (373) T cd06453 164 IAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHK-MLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET-TY 241 (373) T ss_pred HHHHCCCEEEEECCCCCCCCCCCHHHHHCCEEEEECHH-CCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCC-CC T ss_conf 99874976998762124554651777627738976101-15888349999860145247833168875333234322-22 Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC Q ss_conf 10334786446664488999999998620103189999999977999999987479716766882003653178982473 Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS 315 (391) Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391) T Consensus 242 ~~~~~rf-e~GT~n~~~i~~l~~al~~~~~~-g~~~i~~~~~~L~~~l~~~L~~l~~v~i~-~~~~~r~~-ivsf~~~~~ 317 (373) T cd06453 242 ADLPHKF-EAGTPNIAGAIGLGAAIDYLEKI-GMEAIAAHEHELTAYALERLSEIPGVRVY-GDAEDRAG-VVSFNLEGI 317 (373) T ss_pred CCCCCCC-CCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHCCCCCEEC-CCCCCCCC-EEEEEECCC T ss_conf 5552202-55675588999999999999984-89999999999999999999638997624-88455688-899996995 Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--------CCCEEEEECCCCCCHHHHHHHHHHH Q ss_conf 10113734567888999998886282872665567--------6750568615888999999999999 Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--------APLGLRVWVGVTVEKEDLLLLCDWL 375 (391) Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--------~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391) T Consensus 318 ~------------~~~v~~~L~~~gI~vs~G~~Ca~~~~~~~g~~g~iRvS~~~ynt~~dId~li~al 373 (373) T cd06453 318 H------------PHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373) T ss_pred C------------HHHHHHHHHHCCEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC T ss_conf 9------------9999999967992997863324488997289987999688889999999999559 |
This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine. |
| >TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-29 Score=203.48 Aligned_cols=335 Identities=15% Similarity=0.166 Sum_probs=252.3 Q ss_pred HHHHHHHHHHHC------CCCC-CCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH-CCC--CCCE Q ss_conf 689999863210------3653-289-8899999999999999968899857999748734899987532-057--8970 Q gi|254780153|r 25 PGWSLGILEGAL------LGRS-HRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS-LLG--YRGV 93 (391) Q Consensus 25 p~~v~~~~~~~~------l~~s-HRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n-l~~--~~~~ 93 (391) T Consensus 13 P~ev~~a~~~~~~~~gg~~gRG~~~~~l~~~~~v~EtR~~lA~Lf~~~~~~~v~F-t~nAT~aLN~~L~Gl~lknr~g~h 91 (384) T TIGR01977 13 PDEVYEAMADFLKNYGGSPGRGRYRLALRASREVEETRELLAKLFNAPSKAHVVF-TNNATTALNIALKGLILKNREGDH 91 (384) T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEE-ECCHHHHHHHHHHCCCCCCCCCCC T ss_conf 3899999999987348756888750345414228899999999848897462784-060779999998433000559996 Q ss_pred EEEEE-CCHHH-HHHHHHHHCC-CCCEEEEECCCCCCCCHHHC----CC--CCCEEEEEEECCCCEEECCEEE---ECCC Q ss_conf 79970-73688-8887653238-76306740577765786767----85--5657997420242022032035---0256 Q gi|254780153|r 94 DVLAW-ESFGL-GWMSDIRQLS-LQDVREFTAPYGSLPDFSKV----DF--DRDVVFVWNGTTSGVCVPDVGF---IPES 161 (391) Q Consensus 94 ~~~~~-g~~~~-r~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~----~~--~~~v~~~h~ETstGv~~~~~~~---~~~~ 161 (391) T Consensus 92 Vi~t~mEHNsV~RPL~~L~~~~~g~~~~iv~~~~~G~~~~e~i~~~~~~~kTk~iv~~HaSNV~G~ilpiEEIgR~lA~e 171 (384) T TIGR01977 92 VITTPMEHNSVLRPLEKLKEERIGVEITIVKCDNEGLISPERIKRAIKKNKTKLIVVSHASNVTGTILPIEEIGRELAKE 171 (384) T ss_pred EEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHHHH T ss_conf 78647602366438999973599758998627888521679999853378830043220030103112578999999986 Q ss_pred CCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC Q ss_conf 8614886401101102545568--57999700120017665154456778887654114457783123200112321033 Q gi|254780153|r 162 REGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239 (391) Q Consensus 162 ~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (391) T Consensus 172 ~g~~~~~DAaQtAGv~~Id~~~~~i~~lAF~GHKgLlGP~GtGGl~~~e~~~~~l~pl~~GGTGs~S~~~~~P-~~~Pdr 250 (384) T TIGR01977 172 NGIFFILDAAQTAGVIPIDMEELAIDMLAFTGHKGLLGPQGTGGLIIKEGIKEILKPLKSGGTGSHSALIDQP-SELPDR 250 (384) T ss_pred CCCEEEEECCCCCCCCHHCCCHHHCCEEEECCCHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCC-CCCCCH T ss_conf 7973998320003754101032206767637752200113631578873705674532068875453444577-604320 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC Q ss_conf 47864466644889999999986201031899999999779999999874797167668820036531789824731011 Q gi|254780153|r 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS 319 (391) Q Consensus 240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~ 319 (391) T Consensus 251 fE~G---TLN~pGI~gL~agik~~~~~-gi~~i~~kE~~l~~~l~~~L~~~~~V~iyG~~d~~~~~~vvSf~~~g~---- 322 (384) T TIGR01977 251 FESG---TLNTPGIAGLNAGIKFIEKI-GIANIAKKELKLTEKLLNGLKEIKKVKIYGPKDPAKRVGVVSFTVEGI---- 322 (384) T ss_pred HCCC---CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCEEEEEECCC---- T ss_conf 1144---00379999998887887564-477899999999999987401678067627703433267589983488---- Q ss_pred CCHHHHHHHHHHHHHHHHHCC-EEECCCCC------CCCCC----EEEEECCCCCCHHHHHHHHHHHHH Q ss_conf 373456788899999888628-28726655------67675----056861588899999999999999 Q gi|254780153|r 320 LDINSQKSFCKSMLSFLEKEE-IAYDIGSY------RDAPL----GLRVWVGVTVEKEDLLLLCDWLRW 377 (391) Q Consensus 320 ~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~------r~~~~----~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391) T Consensus 323 --------d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt~R~S~gyFnt~ee~~~l~~al~~ 383 (384) T TIGR01977 323 --------DSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLVEALSE 383 (384) T ss_pred --------CHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHC T ss_conf --------8778999998618918976766641230353116765388727877888999999999850 |
Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown.. |
| >PRK02948 cysteine desulfurase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-28 Score=197.55 Aligned_cols=330 Identities=14% Similarity=0.083 Sum_probs=228.7 Q ss_pred CCCCHHHHHHHHHHHCCCC--C----CC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC----CC Q ss_conf 7689689999863210365--3----28-988999999999999999688998579997487348999875320----57 Q gi|254780153|r 21 CAKRPGWSLGILEGALLGR--S----HR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL----LG 89 (391) Q Consensus 21 ~~~~p~~v~~~~~~~~l~~--s----HR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl----~~ 89 (391) T Consensus 10 tp~~~~-v~~a~~~~~~~~~~N~~s~h~~~~~a~~~~e~aR~~ia~~lga~~~-~IvF-Tsg~Tes~nlai~~~~~~~~~ 86 (381) T PRK02948 10 TPMSEE-ALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGKEQ-GVYF-TSGGTESNYLAIQSLLNALPQ 86 (381) T ss_pred CCCCHH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CEEE-ECCHHHHHHHHHHHHHHHHCC T ss_conf 999999-9999999998706898514179999999999999999998099978-0899-288769999999999997057 Q ss_pred CCCEEEEEECCH-H-HHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE--ECC Q ss_conf 897079970736-8-88887653238763067405777657867678-----55657997420242022032035--025 Q gi|254780153|r 90 YRGVDVLAWESF-G-LGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF--IPE 160 (391) Q Consensus 90 ~~~~~~~~~g~~-~-~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~--~~~ 160 (391) T Consensus 87 ~g~~ii~s~~EH~sv~~~~~~l~~~G-~~v~~i~~d~~G~id~~~l~~~l~~~t~LV~v~~asN~tG~i~pi~~I~~~a~ 165 (381) T PRK02948 87 NKKHIITTPMEHASIHSYFQSLESQG-YTVTEIPVDKSGLIRLVDLERAITEDTVLASIQHANSEIGTIQPIAEIGALLK 165 (381) T ss_pred CCCEEEECCCCCCHHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECEEECCCCCCCHHHHHHHHH T ss_conf 99989974642200789999999729-98999677888876999999756899469999750206864775889999998 Q ss_pred CCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC Q ss_conf 6861488640110110254556--85799970012001766515445677888765411445778312320011232103 Q gi|254780153|r 161 SREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG 238 (391) Q Consensus 161 ~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391) T Consensus 166 ~~g~~~~vDa~Q~~g~~~idv~~l~~D~~~fS~HK-~~GP~GiG~L~~~~~~~-----~~-----~~~---~-----g~~ 226 (381) T PRK02948 166 KYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHK-IYGPKGVGAVYINPQVR-----WK-----PVF---P-----GTS 226 (381) T ss_pred HHCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEHHC-CCCCCCEEEEEECCCCC-----CC-----CCC---C-----CCC T ss_conf 70987984656614651665344677625620000-45887259999878986-----55-----566---8-----988 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC Q ss_conf 34786446664488999999998620103189999999977999999987479716766882003653178982473101 Q gi|254780153|r 239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA 318 (391) Q Consensus 239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~ 318 (391) T Consensus 227 ~e~~~~~GT~nv~gi~~l~~A~~~~~~--~~~~~~~~~~~L~~~l~~~l~~~~~~~~~~~~~~~~~p~i~~~~~~~~~-- 302 (381) T PRK02948 227 HEKGFRPGTVNVPGIAAFLTAAENILK--NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGFE-- 302 (381) T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCC-- T ss_conf 789766786759999999999999986--4999999999999999999854799746568863456867887338868-- Q ss_pred CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC-------------------CEEEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 1373456788899999888628287266556767-------------------505686158889999999999999999 Q gi|254780153|r 319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP-------------------LGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391) Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~-------------------~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391) T Consensus 303 ----------~~~~~~~l~~~gI~v~~GsaCa~~~~~~s~~l~a~g~~~~~a~~~vRvS~g~ynT~eeId~~i~al~~i~ 372 (381) T PRK02948 303 ----------GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIG 372 (381) T ss_pred ----------HHHHHHHCCCCCCEEECCHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHH T ss_conf ----------8999985421681897804527898870089997599878809259997479999999999999999999 Q ss_pred HHHHHHHHHHCC Q ss_conf 999998775119 Q gi|254780153|r 380 YFQKISFLRAIS 391 (391) Q Consensus 380 ~~~k~~~~~~~~ 391 (391) T Consensus 373 ~~----f~r~~~ 380 (381) T PRK02948 373 NQ----FYRGVK 380 (381) T ss_pred HH----HHHHCC T ss_conf 99----820216 |
|
| >TIGR03402 FeS_nifS cysteine desulfurase NifS | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-27 Score=195.16 Aligned_cols=328 Identities=17% Similarity=0.133 Sum_probs=228.4 Q ss_pred CCCCCCCHHHHHHHHHHHCCC-------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-- Q ss_conf 887768968999986321036-------53289889999999999999996889985799974873489998753205-- Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALLG-------RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-- 88 (391) Q Consensus 18 pGP~~~~p~~v~~~~~~~~l~-------~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-- 88 (391) T Consensus 6 AAtt~~~~~-V~~a~~~~~~~~~~np~~~h~~~~~a~~~~e~aR~~iA~~lga~~~-eIvF-t~~~T~a~n~~i~~~~~~ 82 (379) T TIGR03402 6 NATTRVDPE-VLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-EIIF-TSGGTESDNTAIKSALAA 82 (379) T ss_pred CCCCCCCHH-HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CEEE-ECCHHHHHHHHHHHHHHH T ss_conf 665889999-9999999999658997765899999999999999999998299967-3999-288799999999999986 Q ss_pred -CCCCEEEEEECCHHH--HHHHHHHHCCCCCEEEEEC-CCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE-- Q ss_conf -789707997073688--8887653238763067405-77765786767-----855657997420242022032035-- Q gi|254780153|r 89 -GYRGVDVLAWESFGL--GWMSDIRQLSLQDVREFTA-PYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF-- 157 (391) Q Consensus 89 -~~~~~~~~~~g~~~~--r~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~-- 157 (391) T Consensus 83 ~~~~d~Ii~s~~eH~a~~~~~~~l~~~-g~~v~~~~~~~~g~-id~~~l~~~l~~~T~lvs~~~~sn~tG~i~pv~~I~~ 160 (379) T TIGR03402 83 QPEKRHIITTAVEHPAVLSLCQHLEKQ-GYKVTYLPVDEEGR-LDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGE 160 (379) T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHC-CCEEEEEECCCCCC-CCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH T ss_conf 799999998013104566799999965-98899970378982-6426678872678628996125788870178999999 Q ss_pred ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH Q ss_conf 0256861488640110110254556--85799970012001766515445677888765411445778312320011232 Q gi|254780153|r 158 IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391) Q Consensus 158 ~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391) T Consensus 161 ~~~~~g~~~~vDa~Q~~g~~pidv~~~~~D~~~~S~hK-~~GP~G~G~Ly~r~~~--~---~~P~-----~~G--g---- 223 (379) T TIGR03402 161 IAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGT--R---FRPL-----LRG--G---- 223 (379) T ss_pred HHHHCCCEEEEECCCCCCCCCCCHHHHCCCCEECCHHH-CCCCCCEEEEEECCCC--C---CCCC-----CCC--C---- T ss_conf 99763988994531124664640344157721202111-3688725999982676--6---6876-----788--8---- Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCCCCCEEEEEECC Q ss_conf 1033478644666448899999999862010318999999997799999998-747971676688200365317898247 Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFI-QENDWIENLAVDETTRSNTSICMKIVD 314 (391) Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i-~~~~~~~~~~~~~~~rS~~~v~~~~~d 314 (391) T Consensus 224 --~~e~~~~~GT~n~~~i~gl~~a~~~~~~--~~~~~~~~~~~l~~~l~~~ll~~~~~~~i-~g~~~~r~p~~~~~~~~~ 298 (379) T TIGR03402 224 --HQERGRRAGTENVPGIVGLGKAAELATE--HLEEENTRVRALRDRLEAGLLARIPDARL-NGDPTKRLPNTVNISFEY 298 (379) T ss_pred --CCCCCCCCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEE-CCCHHHCCCCCEEECCCC T ss_conf --8777767897129999999999999997--59999999999999999999850898275-478666488730323699 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC-------------------CCEEEEECCCCCCHHHHHHHHHHH Q ss_conf 3101137345678889999988862828726655676-------------------750568615888999999999999 Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA-------------------PLGLRVWVGVTVEKEDLLLLCDWL 375 (391) Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~-------------------~~~~RIg~~g~i~~~dv~~L~~aL 375 (391) T Consensus 299 ~~------------~~~i~~~L~~~gI~v~~G~~Ca~~~~~ps~vL~a~g~~~~~~~g~iRvS~~~ynT~edId~li~aL 366 (379) T TIGR03402 299 IE------------GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVL 366 (379) T ss_pred CC------------HHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHH T ss_conf 89------------999999845189299750321599986249999759983333956999738999999999999999 Q ss_pred HHHHHHHHH Q ss_conf 999999999 Q gi|254780153|r 376 RWVFYFQKI 384 (391) Q Consensus 376 e~~~~~~k~ 384 (391) T Consensus 367 ~~iv~~lr~ 375 (379) T TIGR03402 367 PPIIARLRA 375 (379) T ss_pred HHHHHHHHH T ss_conf 999999985 |
Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403. |
| >TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-26 Score=188.83 Aligned_cols=330 Identities=16% Similarity=0.108 Sum_probs=234.8 Q ss_pred CCCCCCCHHHHHHHHHHHCCCC------CCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-- Q ss_conf 8877689689999863210365------328-9889999999999999996889985799974873489998753205-- Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALLGR------SHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-- 88 (391) Q Consensus 18 pGP~~~~p~~v~~~~~~~~l~~------sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-- 88 (391) T Consensus 6 aAtt~~~~~-Vi~~~~~~~~~~~~Np~s~h~~~~~a~~~~e~aR~~ia~~l~a~~~~eIvF-Tsg~Tea~N~~~~gl~~~ 83 (382) T TIGR03403 6 NATTMLDPK-VKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIII-TSCATESNNWVLKGVYFD 83 (382) T ss_pred CCCCCCCHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHHHHHHHHHHHHHH T ss_conf 356899999-999999999866899632539999999999999999999759699786999-387589999999999999 Q ss_pred ---CCC-CEEEEEECC-HH-HHHHHHHHHCCCCCEEEEECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE Q ss_conf ---789-707997073-68-88887653238763067405777657867678-----55657997420242022032035 Q gi|254780153|r 89 ---GYR-GVDVLAWES-FG-LGWMSDIRQLSLQDVREFTAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF 157 (391) Q Consensus 89 ---~~~-~~~~~~~g~-~~-~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~ 157 (391) T Consensus 84 ~~~~~~~~~ii~s~~EH~sv~~~~~~l~~~G-~~v~~~~~d~~G~~d~~~l~~~l~~~T~LVai~~anN~tG~i~pv~~I 162 (382) T TIGR03403 84 EILKGGKNHIITTEVEHPAVRATCAFLESLG-VEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEI 162 (382) T ss_pred HHHCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHH T ss_conf 8636899999995565153899999999659-789997759998588999997601466067763147677777879999 Q ss_pred --ECCCCCCEEEEEECCHHHHCCCCCC--CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH Q ss_conf --0256861488640110110254556--857999700120017665154456778887654114457783123200112 Q gi|254780153|r 158 --IPESREGLVICDATSAVFARHIDFN--KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391) Q Consensus 158 --~~~~~~~llivD~vSs~g~~p~d~~--~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391) T Consensus 163 ~~~~~~~g~~~~vDa~Q~~g~~pidv~~l~~D~l~~S~HK-~~GP~GiG~L~ir~~~-----~l~P~-----~~Gg---- 227 (382) T TIGR03403 163 GEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHK-FHGPKGVGGLYIRKGV-----ELTPL-----FHGG---- 227 (382) T ss_pred HHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEHHH-CCCCCCEEEEEECCCC-----CCCCC-----CCCC---- T ss_conf 9999872987996713413564643232346524531010-3688834999986777-----65876-----5898---- Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC Q ss_conf 32103347864466644889999999986201031899999999779999999874797167668820036531789824 Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV 313 (391) Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~ 313 (391) T Consensus 228 ----~~~~~~r~GT~n~~~i~~l~~A~~~~~~--~~~~~~~~~~~L~~~l~~~L~~i~~~~i~-g~~~~r~p~~~~~~~~ 300 (382) T TIGR03403 228 ----EHMGGRRSGTLNVPYIVAMGEAMRLANE--YLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTILISIK 300 (382) T ss_pred ----CCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCEEE-CCHHHCCCCEEEEECC T ss_conf ----7747612798678899999999999999--89999999999999999999817794671-6833258857986279 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC-------------------CCEEEEECCCCCCHHHHHHHHHH Q ss_conf 73101137345678889999988862828726655676-------------------75056861588899999999999 Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDA-------------------PLGLRVWVGVTVEKEDLLLLCDW 374 (391) Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~-------------------~~~~RIg~~g~i~~~dv~~L~~a 374 (391) T Consensus 301 ~i~------------~~~~~~~L~~~gI~v~~GsaCas~~~~~s~vl~a~g~~~~~~~~~vR~S~~~ynT~eeId~~i~~ 368 (382) T TIGR03403 301 GVE------------GEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEV 368 (382) T ss_pred CCC------------HHHHHHHHCCCCEEEECHHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 989------------89999984709979975577289988758999971998544595799975899999999999999 Q ss_pred HHHHHHHHHH Q ss_conf 9999999999 Q gi|254780153|r 375 LRWVFYFQKI 384 (391) Q Consensus 375 Le~~~~~~k~ 384 (391) T Consensus 369 l~~~v~~lr~ 378 (382) T TIGR03403 369 FKKAVQRLRA 378 (382) T ss_pred HHHHHHHHHH T ss_conf 9999999987 |
Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PMID:11123951), so we use this designation. |
| >COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-22 Score=158.37 Aligned_cols=327 Identities=19% Similarity=0.142 Sum_probs=235.1 Q ss_pred CCCCHHHHHHHHHHHCCCC------CCC-CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC--CC-- Q ss_conf 7689689999863210365------328-988999999999999999688998579997487348999875320--57-- Q gi|254780153|r 21 CAKRPGWSLGILEGALLGR------SHR-CVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL--LG-- 89 (391) Q Consensus 21 ~~~~p~~v~~~~~~~~l~~------sHR-s~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl--~~-- 89 (391) T Consensus 11 Tp~~~~-v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~-~eIiF-TSG~TEsnNlaI~g~~~a~~~ 87 (386) T COG1104 11 TPVDPE-VLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADP-EEIIF-TSGATESNNLAIKGAALAYRN 87 (386) T ss_pred CCCCHH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEE-ECCCCHHHHHHHHHHHHHHHC T ss_conf 889899-999999998753189611557579999999999999999839997-80899-569847777999864876423 Q ss_pred -CCCEEEEEE--CCHHHH-HHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----CCEEEEEEECCCCEEECCEEE--E Q ss_conf -897079970--736888-88765323876306740577765786767855-----657997420242022032035--0 Q gi|254780153|r 90 -YRGVDVLAW--ESFGLG-WMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----RDVVFVWNGTTSGVCVPDVGF--I 158 (391) Q Consensus 90 -~~~~~~~~~--g~~~~r-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~v~~~h~ETstGv~~~~~~~--~ 158 (391) T Consensus 88 ~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~v~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i 166 (386) T COG1104 88 AQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEI 166 (386) T ss_pred CCCCCEEEECCCCCHHHHHHHHHH-HHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEEEEEECCCCEEECCCHHHHHHH T ss_conf 568985887554349999999999-8669757996888897287999998638884599998502682011209999999 Q ss_pred CCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH Q ss_conf 2568614886401101102545568--57999700120017665154456778887654114457783123200112321 Q gi|254780153|r 159 PESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391) Q Consensus 159 ~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391) T Consensus 167 ~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~~--~~~p~-----------i-----~G 227 (386) T COG1104 167 CKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPGV--RLEPL-----------I-----HG 227 (386) T ss_pred HHHCCCEEEEEHHHHCCCEECCCCCCCCCEEEEEHHH-CCCCCCEEEEEECCCC--CCCCE-----------E-----EC T ss_conf 9975981797613325760046021576568731121-3699842799987998--73744-----------6-----04 Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCEEEEEECCC Q ss_conf 033478644666448899999999862010318999999997799999998747-9716766882003653178982473 Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN-DWIENLAVDETTRSNTSICMKIVDS 315 (391) Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~-~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391) T Consensus 228 GgQE~g~RsGTenv~~Ivg~~~A~~~a~~~--~~~~~~~~~~lr~~l~~~l~~~~p~~~~~-g~~~~rlP~~~~~~f~gv 304 (386) T COG1104 228 GGQERGLRSGTENVPGIVGFGKAAEIAVEE--LEEENARLRKLRDRLEDGLLEIIPDVYLN-GDDEPRLPNILNFSFPGV 304 (386) T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCEEEC-CCCCCCCCCEEEEEECCC T ss_conf 767899788875579999999999999987--78889999999999999998509968986-885457898689996897 Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCC-------------------CEEEEECCCCCCHHHHHHHHHHHH Q ss_conf 1011373456788899999888628287266556767-------------------505686158889999999999999 Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAP-------------------LGLRVWVGVTVEKEDLLLLCDWLR 376 (391) Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~-------------------~~~RIg~~g~i~~~dv~~L~~aLe 376 (391) T Consensus 305 ~g------------E~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~ 372 (386) T COG1104 305 EG------------ESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALK 372 (386) T ss_pred CH------------HHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCCEEEECCCCCCHHHHHHHHHHHH T ss_conf 57------------899986104086873364345899871499998099968837248997379998999999999999 Q ss_pred HHHHHHHHH Q ss_conf 999999998 Q gi|254780153|r 377 WVFYFQKIS 385 (391) Q Consensus 377 ~~~~~~k~~ 385 (391) T Consensus 373 ~~i~~lr~~ 381 (386) T COG1104 373 EIIKRLREL 381 (386) T ss_pred HHHHHHHHH T ss_conf 999998630 |
|
| >KOG1549 consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-16 Score=125.36 Aligned_cols=339 Identities=17% Similarity=0.136 Sum_probs=201.6 Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCC-H--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH Q ss_conf 98886888776896899998632103---653289-8--89999999999999996889985799974873489998753 Q gi|254780153|r 12 KRPFFSSGPCAKRPGWSLGILEGALL---GRSHRC-V--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALW 85 (391) Q Consensus 12 ~~~~F~pGP~~~~p~~v~~~~~~~~l---~~sHRs-~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~ 85 (391) T Consensus 45 vyld~~at~-p~~~~-Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~-dIiF-ts~ATEs~Nlvl~ 120 (428) T KOG1549 45 VYLDNQATG-PMDPR-VLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPS-DIVF-TSGATESNNLVLK 120 (428) T ss_pred EEEECCCCC-CCCHH-HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEE-ECCCHHHHHHHHH T ss_conf 797067678-99989-999999999985259985542023358999999999998489977-3799-4796078889998 Q ss_pred HCCC-CC---C-EEEEEECCHH-HH-HHHHHHHCCCCCEEEEECCCCCCCCHHHCC----C-CCCEEEEEEECCCCEEEC Q ss_conf 2057-89---7-0799707368-88-887653238763067405777657867678----5-565799742024202203 Q gi|254780153|r 86 SLLG-YR---G-VDVLAWESFG-LG-WMSDIRQLSLQDVREFTAPYGSLPDFSKVD----F-DRDVVFVWNGTTSGVCVP 153 (391) Q Consensus 86 nl~~-~~---~-~~~~~~g~~~-~r-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~-~~~v~~~h~ETstGv~~~ 153 (391) T Consensus 121 ~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g-~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~P 199 (428) T KOG1549 121 GVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEG-LEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQP 199 (428) T ss_pred HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC-EEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCC T ss_conf 72202456666369995045760048999998668-27999156865521189999753877439999700367421056 Q ss_pred CEEE--ECCCCCCEEEEEECCHHHHCCCCCCC--CEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC Q ss_conf 2035--02568614886401101102545568--5799970012001766515445677888765411445778312320 Q gi|254780153|r 154 DVGF--IPESREGLVICDATSAVFARHIDFNK--LDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391) Q Consensus 154 ~~~~--~~~~~~~llivD~vSs~g~~p~d~~~--iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391) T Consensus 200 v~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~~----~~~~~~---~p~---~ 268 (428) T KOG1549 200 VKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIY-GPPGIGALYVRRK----RPRLRV---EPP---L 268 (428) T ss_pred HHHHHHHHCCCCCEEEEEHHHHCCCCCCCHHHCCCHHEEEECCCCC-CCCCCEEEEECCC----CCCCCC---CCC---C T ss_conf 9999998574780798454543497441188858212464325302-7996069997468----876544---576---4 Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHH-HHCCCC-CCCCCCCCCCCCC Q ss_conf 011232103347864466644889999999986201031-8999999997799999998-747971-6766882003653 Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG-LSACVERCNANAAVLFQFI-QENDWI-ENLAVDETTRSNT 306 (391) Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG-l~~~~~r~~~~a~~l~~~i-~~~~~~-~~~~~~~~~rS~~ 306 (391) T Consensus 269 -----~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~ 340 (428) T KOG1549 269 -----SGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPEVTLNGSGKSRYPGLV 340 (428) T ss_pred -----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH---HHHHHHHHHHHHCCHHHCCCCCCCCCCCCE T ss_conf -----677430122057757413543688999987502125899999---999999887640735440478600046523 Q ss_pred EEEEEECCCCCCCCCHHHHHHHHH-HH---------HHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH Q ss_conf 178982473101137345678889-99---------99888628287266556767505686158889999999999999 Q gi|254780153|r 307 SICMKIVDSDIASLDINSQKSFCK-SM---------LSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391) Q Consensus 307 ~v~~~~~d~~~~~~~~~~~~~~~~-~~---------~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391) T Consensus 341 ~~~~~~~~g~~~~~~~~--~~~l~s~~a~~~~~~epsy~l~~~G~~~~~-----~~~~iRis~G~y~t~~di~~~~~~i~ 413 (428) T KOG1549 341 SLSFPYVEGESLLMDLK--DVALSSGSACTSASLEPSYVLRAIGVDEDL-----AHSSIRISIGRYTTEEDIDYLVDAIK 413 (428) T ss_pred EEECCCCCCCCHHHHHH--HHHHCCCCHHHCCCCCCCHHHHHCCCCHHH-----HCCEEEEEEEEECCHHHHHHHHHHHH T ss_conf 66025655720021010--444023305443888862116543742322-----11206986322076899999999999 Q ss_pred HHHHH Q ss_conf 99999 Q gi|254780153|r 377 WVFYF 381 (391) Q Consensus 377 ~~~~~ 381 (391) T Consensus 414 ~~v~~ 418 (428) T KOG1549 414 KLVSL 418 (428) T ss_pred HHHHH T ss_conf 99873 |
|
| >TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.2e-16 Score=120.25 Aligned_cols=332 Identities=17% Similarity=0.131 Sum_probs=229.0 Q ss_pred CCC-CCCCCCCCHHHHHHHHHHHCC-------CCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC--HHHHHH Q ss_conf 886-888776896899998632103-------653289-889999999999999996889985799974873--489998 Q gi|254780153|r 14 PFF-SSGPCAKRPGWSLGILEGALL-------GRSHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASD--TGAVEM 82 (391) Q Consensus 14 ~~F-~pGP~~~~p~~v~~~~~~~~l-------~~sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~Gsg--T~~~ea 82 (391) T Consensus 23 ~~~DnpAG~q~-Pq~V~dAv~~~L~~~~A~~gg~~~~~G~~~~~~vd~AR~a~A~LlnA~~Pe~vv~G~~~T~L~~~ls~ 101 (410) T TIGR01976 23 VFFDNPAGTQI-PQSVLDAVSAALTRSNANRGGAYESSGRKADQVVDDAREAVADLLNAESPEEVVFGANATSLAYLLSR 101 (410) T ss_pred EEEECCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHH T ss_conf 89757888877-73479999999874130137677663068999999999999997267988856767866899999999 Q ss_pred HHHHCCCCCCEEEEEE---CCHHHHHHHHHHHCCCCCEEEEECCCCCC-CCHHHC-----CCCCCEEEEEEECCCCEEEC Q ss_conf 7532057897079970---73688888765323876306740577765-786767-----85565799742024202203 Q gi|254780153|r 83 ALWSLLGYRGVDVLAW---ESFGLGWMSDIRQLSLQDVREFTAPYGSL-PDFSKV-----DFDRDVVFVWNGTTSGVCVP 153 (391) Q Consensus 83 ~~~nl~~~~~~~~~~~---g~~~~r~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~-----~~~~~v~~~h~ETstGv~~~ 153 (391) T Consensus 102 a~~~~~~~GDEvivt~LDHeaNispW~~~a~~~G-a~Vkw~~~d~~~~~L~~~~L~~Lls~rTRLVAvt~ASn~~Gs~~d 180 (410) T TIGR01976 102 ALSRRWGPGDEVIVTRLDHEANISPWLQAAEDAG-AKVKWARVDEADGELHPDDLASLLSPRTRLVAVTAASNLLGSIVD 180 (410) T ss_pred HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCC-CEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHH T ss_conf 9851268985589716766001368999998389-789996336231544869982366882255562344023255115 Q ss_pred CEEE--ECCCCCCEEEEEECCHHHHCCCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHC Q ss_conf 2035--02568614886401101102545--5685799970012001766515445677888765411445778312320 Q gi|254780153|r 154 DVGF--IPESREGLVICDATSAVFARHID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRM 229 (391) Q Consensus 154 ~~~~--~~~~~~~llivD~vSs~g~~p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~ 229 (391) T Consensus 181 l~A~~~~vh~aGA~v~VDaVhyaPH~L~Dvqa~gaD~l~cSaYK~f-GPH-~G~l~~R~~~~~~l~~~k~~~~------~ 252 (410) T TIGR01976 181 LAALTELVHAAGALVYVDAVHYAPHGLIDVQALGADFLVCSAYKFF-GPH-LGILWGRPELLKSLPPYKLEFS------E 252 (410) T ss_pred HHHHHHHHHHCCCEEEECHHHHCCCCCCCHHHHCCCEEEECCEECC-CCC-EEEEEECHHHHCCCCCCCCCCC------C T ss_conf 8899999987598798811100456664134227887998563116-885-0178711466404687633677------8 Q ss_pred CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC----C-------------HHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 01123210334786446664488999999998620103----1-------------899999999779999999874797 Q gi|254780153|r 230 VKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMG----G-------------LSACVERCNANAAVLFQFIQENDW 292 (391) Q Consensus 230 ~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~g----G-------------l~~~~~r~~~~a~~l~~~i~~~~~ 292 (391) T Consensus 253 ----d~~P~r~E---~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~ayE~~l~~~Ll~~L~~~P~ 325 (410) T TIGR01976 253 ----DTGPERFE---LGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEAYENRLAERLLAGLSDLPG 325 (410) T ss_pred ----CCCCCEEE---ECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf ----88885145---14556026789999999999823210689886558999999999999999999999999874895 Q ss_pred CCCCCC---C-CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-C-----CCC-----CCEEEE Q ss_conf 167668---8-200365317898247310113734567888999998886282872665-5-----676-----750568 Q gi|254780153|r 293 IENLAV---D-ETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-Y-----RDA-----PLGLRV 357 (391) Q Consensus 293 ~~~~~~---~-~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~-----r~~-----~~~~RI 357 (391) T Consensus 326 ~t~yG~~d~~R~~~RvP-Tv~F~v~~~~------------P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~~~GvvR~ 392 (410) T TIGR01976 326 VTVYGVQDEKRLAERVP-TVAFTVAGLS------------PQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEADGGVVRV 392 (410) T ss_pred EEEECHHHHHHHHHCCC-EEEEEECCCC------------HHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCEEEE T ss_conf 69973557864642597-5889727878------------7999999853686331264116899986589898873898 Q ss_pred ECCCCCCHHHHHHHHHHH Q ss_conf 615888999999999999 Q gi|254780153|r 358 WVGVTVEKEDLLLLCDWL 375 (391) Q Consensus 358 g~~g~i~~~dv~~L~~aL 375 (391) T Consensus 393 gLaHY~t~eevd~l~~aL 410 (410) T TIGR01976 393 GLAHYNTAEEVDRLLEAL 410 (410) T ss_pred EECCCCCHHHHHHHHHCC T ss_conf 525779889999998509 |
The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown.. |
| >cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I) | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.5e-13 Score=100.73 Aligned_cols=303 Identities=17% Similarity=0.099 Sum_probs=188.3 Q ss_pred CHHHHHHHHHHHCC--CCC---CCCH-HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE Q ss_conf 96899998632103--653---2898-89999999999999996889985799974873489998753205789707997 Q gi|254780153|r 24 RPGWSLGILEGALL--GRS---HRCV-LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391) Q Consensus 24 ~p~~v~~~~~~~~l--~~s---HRs~-~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391) T Consensus 17 ~p~-~~~a~~~a~~~~G~g~~~sr~~~G~~~~~~~lE~~la~~~g~e~---al~~-~sG~~an~~~i~~l~~~~d~i~~D 91 (349) T cd06454 17 HPE-VIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA---ALVF-SSGYAANDGVLSTLAGKGDLIISD 91 (349) T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCE---EEEE-CCHHHHHHHHHHHCCCCCCEEEEC T ss_conf 999-99999999997399888767364787999999999999869981---9995-570787788886205789779741 Q ss_pred ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-C----CCCCEEEEEEE---CCCCEEECCEEE--ECCCCCCEEE Q ss_conf 073688888765323876306740577765786767-8----55657997420---242022032035--0256861488 Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-D----FDRDVVFVWNG---TTSGVCVPDVGF--IPESREGLVI 167 (391) Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~----~~~~v~~~h~E---TstGv~~~~~~~--~~~~~~~lli 167 (391) T Consensus 92 ~~~H~s--i~~G~~~s~a~~~~--f~Hnd~~~L~~~l~~~~~~~~~~-~iv~egv~Sm~Gd~apL~~l~~l~~~~~~~li 166 (349) T cd06454 92 SLNHAS--IIDGIRLSGAKKRI--FKHNDMEDLEKLLREARRPYGKK-LIVTEGVYSMDGDIAPLPELVDLAKKYGAILF 166 (349) T ss_pred CCCCHH--HHHHHHCCCCCEEE--ECCCCHHHHHHHHHHHHCCCCCE-EEEECCCCCCCCCCCCHHHHHHHHHHHCCEEE T ss_conf 534372--88636524464799--78999999999998532258976-99965767888776798999999998297899 Q ss_pred EEECCHHHHC--------C--CCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHC Q ss_conf 6401101102--------5--45568579997001200176651544567788876541144577831232001123210 Q gi|254780153|r 168 CDATSAVFAR--------H--IDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVME 237 (391) Q Consensus 168 vD~vSs~g~~--------p--~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (391) T Consensus 167 vDeAH~~Gv~G~~G~G~~~~~~~~~~~di~~~tlsKa~G~~Gg--~v~g~~~~i~~l~~~~~~----~------------ 228 (349) T cd06454 167 VDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVGG--YIAGSKELIDYLRSYARG----F------------ 228 (349) T ss_pred EECHHHCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCC--EEECCHHHHHHHHHHCCC----C------------ T ss_conf 7232331741588876788658988667998536543467771--242535689999861988----5------------ Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC Q ss_conf 33478644666448899999999862010318999999997799999998747971676688200365317898247310 Q gi|254780153|r 238 GLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDI 317 (391) Q Consensus 238 ~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~ 317 (391) T Consensus 229 ---i~s~--~l~p~~~aa~~~al~~l~~---~~~~~~~L~~~~~~~~~~l~~~g-~~i-~--~~-~~~~i~~~~~~~~-- 293 (349) T cd06454 229 ---IFST--SLPPAVAAAALAALEVLQG---GPERRERLQENVRYLRRGLKELG-FPV-G--GS-PSHIIPPLIGDDP-- 293 (349) T ss_pred ---CCCC--CCCHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHCC-CCC-C--CC-CCCCEEEEECCCH-- T ss_conf ---7777--7689999999999999863---95889999999999999999769-975-7--99-9972799986999-- Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 1137345678889999988862828726655676750---568615888999999999999999 Q gi|254780153|r 318 ASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWV 378 (391) Q Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391) T Consensus 294 ---------~~a~~~~~~L~~~Gi~v~~~~~Ptvp~~~~~lRi~~sa~ht~edId~li~~l~ev 348 (349) T cd06454 294 ---------AKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349) T ss_pred ---------HHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH T ss_conf ---------9999999999887962863798978999835999868779999999999999974 |
The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life. |
| >PRK05958 8-amino-7-oxononanoate synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-11 Score=93.02 Aligned_cols=306 Identities=14% Similarity=0.046 Sum_probs=193.7 Q ss_pred CCHHHHHHHHHHHC--CCCCCCCHH----HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE Q ss_conf 89689999863210--365328988----999999999999999688998579997487348999875320578970799 Q gi|254780153|r 23 KRPGWSLGILEGAL--LGRSHRCVL----GKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL 96 (391) Q Consensus 23 ~~p~~v~~~~~~~~--l~~sHRs~~----f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~ 96 (391) T Consensus 54 ~hp~-v~~a~~~a~~~yG~g~~~SRl~~G~~~~h~~LE~~lA~~~g~e~---allf-~SGy~An~~~i~al~~~~d~ii~ 128 (387) T PRK05958 54 NHPE-LIAAAQQAARRYGVGSGGSRLVTGNSPAHEALEAELAEWFGAER---ALLF-SSGYAANLAVLTALVGKGDLIVS 128 (387) T ss_pred CCHH-HHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCC---EEEE-CCCHHHHHHHHHHCCCCCCEEEE T ss_conf 9999-99999999998389886563230686999999999999868996---7964-55238666566532789978997 Q ss_pred EE-CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CCC-CCEEEEEEECC---CCEEECCEE--EECCCCCCEEEE Q ss_conf 70-73688888765323876306740577765786767-855-65799742024---202203203--502568614886 Q gi|254780153|r 97 AW-ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DFD-RDVVFVWNGTT---SGVCVPDVG--FIPESREGLVIC 168 (391) Q Consensus 97 ~~-g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~v~~~h~ETs---tGv~~~~~~--~~~~~~~~lliv 168 (391) T Consensus 129 D~~~HaSi---~dG~~ls~a~~~--~f~HnD~~~Le~~L~~~~~~~~~iv~egvySMdGd~apL~~i~~L~~~y~~~L~v 203 (387) T PRK05958 129 DKLNHASL---IDGARLSRAEVR--RYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLV 203 (387) T ss_pred ECCCCHHH---HHHHHHCCCCEE--EECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEE T ss_conf 10046989---998872799289--9689999999999973889875999746657788766899999999970847884 Q ss_pred EECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC Q ss_conf 401101102---------545-5685799970012001766515445677888765411445778312320011232103 Q gi|254780153|r 169 DATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG 238 (391) Q Consensus 169 D~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391) T Consensus 204 DeAH~~Gv~G~~G~G~~e~~~~~~~vdi~~gTlsKA~gs~GG--~i~g~~~~i~~l~~~a-~~~---------------- 264 (387) T PRK05958 204 DEAHGTGVLGPQGRGLAEAAGLAGEIVILVGTLGKALGSSGA--AVLGSETLIDYLINRA-RPF---------------- 264 (387) T ss_pred CCHHHCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCE--EEEECHHHHHHHHHHC-CCC---------------- T ss_conf 262222633799984899847888868997605444567743--9950789999998739-020---------------- Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC Q ss_conf 34786446664488999999998620103189999999977999999987479716766882003653178982473101 Q gi|254780153|r 239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA 318 (391) Q Consensus 239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~ 318 (391) T Consensus 265 --ifSt--alpP~~~aa~~~al~~i~~~---~~~~~~L~~n~~~~~~~l~~~g~-~~----~~s~sp-Iipi~ig~~~-- 329 (387) T PRK05958 265 --IFTT--ALPPAQAAAARAALRILREE---PERRERLAALIARLRAGLRALGL-GL----PDSESA-IQPLIVGDNE-- 329 (387) T ss_pred --CCCC--CCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CC----CCCCCC-EEEEEECCHH-- T ss_conf --3158--88779999999999998609---59999999999999864575399-85----899998-7999969999-- Q ss_pred CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 137345678889999988862828726655676750---568615888999999999999999999 Q gi|254780153|r 319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 330 ---------~~~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~i~a~ht~~dId~l~~~l~e~~~~ 386 (387) T PRK05958 330 ---------RALALAAALQAQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEALAA 386 (387) T ss_pred ---------HHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH T ss_conf ---------999999999977952831789988999844999978779999999999999999950 |
|
| >PRK10534 L-threonine aldolase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2e-11 Score=91.98 Aligned_cols=299 Identities=16% Similarity=0.149 Sum_probs=178.1 Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE Q ss_conf 88776896899998632103653289889999999999999996889985799974873489998753205789707997 Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391) Q Consensus 18 pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391) T Consensus 10 t~p~---~~-m~~Am~~A~~G--ddvYgeDptv~~Le~~~A~l~G~ea---alFvp-sGTmaN~iAl~~~~~~g~~vi~~ 79 (333) T PRK10534 10 TRPS---RA-MLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSGKEA---ALFLP-TGTQANLVALLSHCERGEEYIVG 79 (333) T ss_pred CCCC---HH-HHHHHHCCCCC--CCCCCCCHHHHHHHHHHHHHHCCCE---EEEEC-CCCHHHHHHHHHHCCCCCEEEEC T ss_conf 9999---99-99999737557--7545769899999999999858971---89957-87578999999847899869875 Q ss_pred ECCHHH-HHHHHHHHCCCCCEEEEEC-CCCCCCCHHHCC----C------CCCEEEEEEECCCCEEECCEEE-----ECC Q ss_conf 073688-8887653238763067405-777657867678----5------5657997420242022032035-----025 Q gi|254780153|r 98 WESFGL-GWMSDIRQLSLQDVREFTA-PYGSLPDFSKVD----F------DRDVVFVWNGTTSGVCVPDVGF-----IPE 160 (391) Q Consensus 98 ~g~~~~-r~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~----~------~~~v~~~h~ETstGv~~~~~~~-----~~~ 160 (391) T Consensus 80 ~~sHI~~~E~Gg~a~l~g~~~~~i~~~~~g~~-~~~~v~~~i~~~~~h~~~~~lv~len-T~~G~v~p~~el~~i~~~a~ 157 (333) T PRK10534 80 QAAHNYLYEAGGAAVLGSIQPQPIDAAADGTL-PLDKVAAKIKPDDIHFARTRLLSLEN-THNGKVLPREYLKEAWEFTR 157 (333) T ss_pred CCCCCHHCCCCCHHHHCCCCEEEECCCCCCCC-CHHHHHHHCCCCCCCCCCEEEEEEEE-CCCCEECCHHHHHHHHHHHH T ss_conf 77761011466489876952155147889824-89999986187887667624665540-35885368999999999999 Q ss_pred CCCCEEEEEEC------CHHHHCCCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH Q ss_conf 68614886401------1011025455-6857999700120017665154456778887654114457783123200112 Q gi|254780153|r 161 SREGLVICDAT------SAVFARHIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391) Q Consensus 161 ~~~~llivD~v------Ss~g~~p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391) T Consensus 158 ~~gl~vHlDGARl~NA~~a~g~~~~e~~~~~Dsvs~clsKgLGap~G-svl~g~~~~i~~a~~~RK~~------------ 224 (333) T PRK10534 158 ERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVG-SLLVGNRDYIKRAIRWRKMT------------ 224 (333) T ss_pred HCCCEEEECHHHHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCCCC-EEEECCHHHHHHHHHHHHHH------------ T ss_conf 75983762327776446542999999997589889874067887332-14646899999999999985------------ Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC Q ss_conf 32103347864466644889999999986201031899999999779999999874797167668820036531789824 Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV 313 (391) Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~ 313 (391) T Consensus 225 -------GGgmrQ---~-g~lA-Aa~l~-aL~~-~~~rl~~dH~-nA~~La~~L~~~g-~~~~--~~----eTN~vf~~~ 282 (333) T PRK10534 225 -------GGGMRQ---A-GILA-AAGLY-ALKH-NVARLQEDHD-NAAWLAQQLREAG-ADVM--RQ----DTNMLFVRV 282 (333) T ss_pred -------CCHHHH---H-HHHH-HHHHH-HHHC-CHHHHHHHHH-HHHHHHHHHHHCC-CCCC--CC----CCCEEEEEC T ss_conf -------465558---9-9999-99999-9963-9998999999-8999999999769-8748--99----764799977 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH Q ss_conf 7310113734567888999998886282872665567675056861588899999999999999999 Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391) Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391) T Consensus 283 ~~~-----------~~~~l~~~~~~~gv~~~~------~~~vR~Vth~~it~~dv~~~i~~~r~~l~ 332 (333) T PRK10534 283 GEE-----------NAAALGEYMRERNVLINA------SPIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333) T ss_pred CHH-----------HHHHHHHHHHHCCEEECC------CCCEEEEEECCCCHHHHHHHHHHHHHHHC T ss_conf 877-----------799999999987967579------98189998089999999999999999971 |
|
| >cd06502 TA_like Low-specificity threonine aldolase (TA) | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.6e-11 Score=91.29 Aligned_cols=306 Identities=16% Similarity=0.068 Sum_probs=184.6 Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE Q ss_conf 88776896899998632103653289889999999999999996889985799974873489998753205789707997 Q gi|254780153|r 18 SGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391) Q Consensus 18 pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391) T Consensus 8 t~p---~p~-m~~A~~~A~~g--d~~yg~D~~~~~le~~~a~l~g~e---aa~f~~-sGT~aN~~al~~~~~~~~~vi~~ 77 (338) T cd06502 8 TGP---TPE-MLEAMAAANVG--DDVYGEDPTTAKLEARAAELFGKE---AALFVP-SGTAANQLALAAHTQPGGSVICH 77 (338) T ss_pred CCC---CHH-HHHHHHCCCCC--CCCCCCCHHHHHHHHHHHHHHCCC---EEEEEC-CCCHHHHHHHHHHCCCCCEEEEE T ss_conf 889---999-99999806367--866678989999999999984898---299807-84189999999856999758850 Q ss_pred E-CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----------CCEEEEEEECCCCEEECCEEE-----ECC Q ss_conf 0-73688888765323876306740577765786767855-----------657997420242022032035-----025 Q gi|254780153|r 98 W-ESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----------RDVVFVWNGTTSGVCVPDVGF-----IPE 160 (391) Q Consensus 98 ~-g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~v~~~h~ETstGv~~~~~~~-----~~~ 160 (391) T Consensus 78 ~~aHi~~~E~g~~~~~~G~~~~~~~~~~g~-l~~~~i~~~i~~~~~~h~~~~~lv~ient~e~G~v~~~~el~~i~~~a~ 156 (338) T cd06502 78 ETAHIYTDEAGAPEFLSGVKLLPVPGENGK-LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAK 156 (338) T ss_pred CCCCEEEECCCCHHHHCCCEEEEEECCCCC-CCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEECCHHHHHHHHHHHH T ss_conf 467145653773998749625643389997-3899999963156886466520799873128963127999999999999 Q ss_pred CCCCEEEEEEC------CHHHHCCCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH Q ss_conf 68614886401------1011025455-6857999700120017665154456778887654114457783123200112 Q gi|254780153|r 161 SREGLVICDAT------SAVFARHIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391) Q Consensus 161 ~~~~llivD~v------Ss~g~~p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391) T Consensus 157 ~~gl~lH~DGARl~nA~~a~g~~~~~~~~~~Dsvs~~~sKglga-p~gavl~g~~~~i~~a~~~rK~------------- 222 (338) T cd06502 157 ENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGA-PVGAVVVGNRDFIARARRRRKQ------------- 222 (338) T ss_pred HCCCEEEECCCCEECEEECCCCCHHHHHHHCCEEEEECCCCCCC-CCCEEEECCHHHHHHHHHHHHH------------- T ss_conf 74972665365300445415999899864187899966566777-4324787788999999999986------------- Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC Q ss_conf 32103347864466644889999999986201031899999999779999999874797167668820036531789824 Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV 313 (391) Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~ 313 (391) T Consensus 223 -------~Gg~m--rq~g~lA--Aa~~~~L~-~~~~~~~l~~dh~~A~~La~~l~~~~~~~~-----~~e--tniv~~~~ 283 (338) T cd06502 223 -------AGGGM--RQSGFLA--AAGLAALE-NDLWLRRLRHDHEMARRLAEALEELGGLES-----EVQ--TNIVLLDP 283 (338) T ss_pred -------HCCCH--HHHHHHH--HHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCC--CCEEEEEC T ss_conf -------47536--4599999--99999985-483789999999999999999986799766-----665--77589832 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH Q ss_conf 7310113734567888999998886282872665567675056861588899999999999999 Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRW 377 (391) Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~ 377 (391) T Consensus 284 ~~~n~~-~~~-----~~~~~~~~~~~g~~~~~~~----~~~vR~Vt~~~~t~~dvd~~i~~ik~ 337 (338) T cd06502 284 VEANAV-FVE-----LSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338) T ss_pred CCCCHH-HHH-----HHHHHHHHHHCCEEEEECC----CCEEEEEECCCCCHHHHHHHHHHHHH T ss_conf 754188-987-----4699999996896999469----99289998899999999999999962 |
This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway. |
| >PRK13520 L-tyrosine decarboxylase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.5e-11 Score=89.21 Aligned_cols=326 Identities=15% Similarity=0.088 Sum_probs=198.5 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC- Q ss_conf 88688877689689999863210365----3289889999999999999996889985799974873489998753205- Q gi|254780153|r 14 PFFSSGPCAKRPGWSLGILEGALLGR----SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL- 88 (391) Q Consensus 14 ~~F~pGP~~~~p~~v~~~~~~~~l~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~- 88 (391) T Consensus 27 ~~~~~~~~~~~~~-a~~a~~-~~~~~N~~~~~~~P~~~~mE~~vv~~~a~l~g~p~~~G--~~tsGGTes~l~Al~aaR~ 102 (375) T PRK13520 27 RILSSMCTKPHPI-AREAHE-MFLETNLGDPGLFPGTAKLEREVVRMLGELLHLPDAYG--YITSGGTEANIQAVRAARN 102 (375) T ss_pred HEEEEEECCCHHH-HHHHHH-HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE--EEECHHHHHHHHHHHHHHH T ss_conf 7347764783499-999999-99961789853387799999999999999809998808--9956189999999999976 Q ss_pred --CCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC----CC-EEEEEEECCCCEEECCEEE--EC Q ss_conf --789707997073688888765323876306740577765786767855----65-7997420242022032035--02 Q gi|254780153|r 89 --GYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD----RD-VVFVWNGTTSGVCVPDVGF--IP 159 (391) Q Consensus 89 --~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~-v~~~h~ETstGv~~~~~~~--~~ 159 (391) T Consensus 103 ~~~~~~p~iv~~-~~aH~s~~Kaa~~~gi~~~~vp~d~~~~~d~~~l~~~i~~~ti~vvatagtt~~G~iDpi~~i~~i~ 181 (375) T PRK13520 103 LADAEKPNIVVP-ESAHFSFDKAADMLGLELRRAPLDEDYRVDVKSVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIA 181 (375) T ss_pred HCCCCCCEEEEE-CCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCEEECCHHHHHHHH T ss_conf 268999879996-7316999999997495569940388886989999998864957999925887882235999999999 Q ss_pred CCCCCEEEEEECCHHHHCC-------CCC--CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC Q ss_conf 5686148864011011025-------455--6857999700120017665154456778887654114457783123200 Q gi|254780153|r 160 ESREGLVICDATSAVFARH-------IDF--NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV 230 (391) Q Consensus 160 ~~~~~llivD~vSs~g~~p-------~d~--~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~ 230 (391) T Consensus 182 ~~~~i~lHVDaa~GGf~~pf~~~~~~~df~l~~vdSIs~d~HK~g~~p~g~g~vl~r~~~~~~~~~--~~~---~Yl~-- 254 (375) T PRK13520 182 LENDIFLHVDAAFGGFVIPFLDDPYDFDFSLPGVSSITIDPHKMGLAPIPAGGILFRDPEFLDALD--VDT---PYLT-- 254 (375) T ss_pred HHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHC--CCC---HHHC-- T ss_conf 975974998625520221125766400047788026424611136515771599987889998724--677---1435-- Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE Q ss_conf 11232103347864466644889999999986201031899999999779999999874797167668820036531789 Q gi|254780153|r 231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM 310 (391) Q Consensus 231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~ 310 (391) T Consensus 255 -------~~~~~tl~gSR~g~~~~~~Wa~l~~~G~-~Gy~~~~~~~~~~a~~la~~l~~~g-~e~~~-~P~---~~iV~F 321 (375) T PRK13520 255 -------SKKQATLTGTRSGAGVAATYAVMKYLGR-EGYRKVVERCMENTRYLVEELEKLG-FEPVI-EPV---LNIVAF 321 (375) T ss_pred -------CCCCEEEECCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCC-CEEEC-CCC---CEEEEE T ss_conf -------8987356058877559999999999739-9999999999999999999998679-98970-898---139999 Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 82473101137345678889999988862828726655676750568615888999999999999999999 Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 322 r~~~~--------------~~l~d~l~~~GW~v~~--~~-~P~~lhivv~~~~~~~~id~fl~DL~e~~~~ 375 (375) T PRK13520 322 DDPNP--------------HEVRKKLRERGWRVSV--TR-CPEALRIVVMPHVTREHIEAFLEDLDEVKKR 375 (375) T ss_pred ECCCH--------------HHHHHHHHHCCCEECC--CC-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC T ss_conf 57999--------------9999999976987457--88-9984899995999989999999999999529 |
|
| >PRK06225 aspartate aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-10 Score=87.06 Aligned_cols=328 Identities=14% Similarity=0.146 Sum_probs=187.8 Q ss_pred CCCCCCCCCCCCCC-CHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC Q ss_conf 89988868887768-96899998632103653-28988999999999999999688998579997487348999875320 Q gi|254780153|r 10 KPKRPFFSSGPCAK-RPGWSLGILEGALLGRS-HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL 87 (391) Q Consensus 10 ~p~~~~F~pGP~~~-~p~~v~~~~~~~~l~~s-HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl 87 (391) T Consensus 21 ~~diI~L~~~e~~~~~p~~v~~a~~~~~~~~~~~~Y~~~~-g~~~Lr~aia~~~~~~~~~ei~v-t~G~~~~l~~~~~a~ 98 (375) T PRK06225 21 KPELIWLGQNTNHLHPHPEVRDAMIRAAKEGEYNKYAPPE-GFEELRELILADLGLDDDFDALV-TAGATESLYLVIRAF 98 (375) T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHHHHCCCCCCEEEE-CCCHHHHHHHHHHHH T ss_conf 9990689999899885799999999996489878879963-58999999999868899974998-278899999999997 Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEE---ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE-- Q ss_conf 578970799707368888876532387630674---05777657867678-----55657997420242022032035-- Q gi|254780153|r 88 LGYRGVDVLAWESFGLGWMSDIRQLSLQDVREF---TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF-- 157 (391) Q Consensus 88 ~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~-- 157 (391) T Consensus 99 ~~pGD~vl~~~P~y~~--y~~~~~~~g~~~~~vpl~~~~~~~~~d~d~l~~~i~~~tk~i~l~nPnNPTG~v~s~~~l~~ 176 (375) T PRK06225 99 LSPGTNTVTSDPGYKI--IDNFANRFGAEVIEVPIYSEECDYKLTPEALKENVDEETKLIVLIDPLNPLGSSYTREEIKE 176 (375) T ss_pred CCCCCEEEECCCCCHH--HHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHH T ss_conf 7998989984898335--99999984990574576685468878999999628888828998299899888788999999 Q ss_pred ---ECCCCCCEEEEEEC-CHHHHC-CC--CCC-CCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHH Q ss_conf ---02568614886401-101102-54--556-857999700120017665--154456778887654114457783123 Q gi|254780153|r 158 ---IPESREGLVICDAT-SAVFAR-HI--DFN-KLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIF 227 (391) Q Consensus 158 ---~~~~~~~llivD~v-Ss~g~~-p~--d~~-~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~ 227 (391) T Consensus 177 l~~~a~~~~i~ii~DE~Y~~f~~~~~~~~~~~~~~~iv~~S~SK~~~-~~G~RiG~~i~~~~~i~~l~~~~~-------- 247 (375) T PRK06225 177 FAEIARDNDAYLVHDCTYRDFAREHTLAAEYAPEGTVTIYSFSKIFG-LAGLRIGAVVAAPDLLEQVAKYVV-------- 247 (375) T ss_pred HHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHCCCCEEEECCCCHHCC-CHHHHHHHHCCCHHHHHHHHHHHC-------- T ss_conf 99999862770000221332067887234537787599823605135-734405141079999999998743-------- Q ss_pred HCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE Q ss_conf 20011232103347864466644889999999986201031899999999779999999874797167668820036531 Q gi|254780153|r 228 RMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTS 307 (391) Q Consensus 228 ~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~ 307 (391) T Consensus 248 ---------------~-~~~~~~~~q~aa~aal~~~--~~~~~~~~~~~~~~r~~~~~~l~~l~g~~~~~-~p---~~g~ 305 (375) T PRK06225 248 ---------------S-DLGANVIAQEAAIAGLKVK--SEWIERIRREDFRNQALIKEAVDEIEGVFLPV-YP---SHAN 305 (375) T ss_pred ---------------C-CCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE-EC---CCCE T ss_conf ---------------8-7887899999999998489--99999999999999999999985373885167-07---9745 Q ss_pred EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCC--CCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 78-982473101137345678889999988862828726655--676750-56861588899999999999999999999 Q gi|254780153|r 308 IC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSY--RDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391) Q Consensus 308 v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391) T Consensus 306 f~~~~~~~~g~----------~~~~~~~~l~e~gV~v~pG~~~~~~~g~~~iRis~~--~~~e~l~~a~~rl~~~l~~lr 373 (375) T PRK06225 306 MLVIDTSEAGI----------RPEDLVEYLLERKIFVRQGTYTSKRFGDRFIRVSFS--IPREWVERFCEEFPDVVATLR 373 (375) T ss_pred EEEEECCCCCC----------CHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHHH T ss_conf 99998668898----------999999999978909968986788789992999970--489999999999999999864 Q ss_pred H Q ss_conf 9 Q gi|254780153|r 384 I 384 (391) Q Consensus 384 ~ 384 (391) T Consensus 374 ~ 374 (375) T PRK06225 374 K 374 (375) T ss_pred C T ss_conf 5 |
|
| >pfam00155 Aminotran_1_2 Aminotransferase class I and II | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.4e-10 Score=84.18 Aligned_cols=304 Identities=16% Similarity=0.120 Sum_probs=166.4 Q ss_pred CHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHH----CCCCCC-EEEEECCCCHHHHHHHHHHCCCCCCEEEEE Q ss_conf 96899998632103653-289889999999999999996----889985-799974873489998753205789707997 Q gi|254780153|r 24 RPGWSLGILEGALLGRS-HRCVLGKERINKAIQLTRKVL----EVPENY-RIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391) Q Consensus 24 ~p~~v~~~~~~~~l~~s-HRs~~f~~i~~~~~~~l~~l~----~~p~~y-~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391) T Consensus 16 ~p~-v~~A~~~a~~~~~~~~-Y~~~~G~~~LR~aia~~~~~~~~~~~~~e~~I~~t~G~~~~l~~~~~~l~~~gd~Vli~ 93 (351) T pfam00155 16 LPA-VAKAEKDALAGGTRNL-YGPTDGLPELREALAKFLGRSPVLKLDREAAVVFGSGAGANIEALIFLLANPGDAILVP 93 (351) T ss_pred CHH-HHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEC T ss_conf 899-9999999974999980-79818789999999998601029999947489981139999999999966994999988 Q ss_pred ECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-----EECCCCCCE Q ss_conf 073688888765323876306740--57776578676785-----565799742024202203203-----502568614 Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-----FIPESREGL 165 (391) Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-----~~~~~~~~l 165 (391) T Consensus 94 ~P~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPTG~~~~~~~l~~l~~~a~~~~~~ 171 (351) T pfam00155 94 APTYASY--IRIARLAGGEVVRYPLYDSNDFHLDFDALEAALKEKPKVVLHESPHNPTGTVAPLEELEKLLDLAKEHNIL 171 (351) T ss_pred CCCCHHH--HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEE T ss_conf 9986889--99999839977898456434779899999975415986999889919877776889999998653028889 Q ss_pred EEEEECCHHHHC---C-CC-----CCC-CEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH Q ss_conf 886401101102---5-45-----568-579997001200176651--54456778887654114457783123200112 Q gi|254780153|r 166 VICDATSAVFAR---H-ID-----FNK-LDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391) Q Consensus 166 livD~vSs~g~~---p-~d-----~~~-iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391) T Consensus 172 ii~DE~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~R~G~i~~~~~~i~~l~~~~~~~------------ 238 (351) T pfam00155 172 LLVDEAYAGFVFGSPDAVATRALLAEGPNLLVVGSFSKAFG-LAGWRVGYILGNAAVISQLRKLARPF------------ 238 (351) T ss_pred EEEECCCCCEECCCCCCCCHHHHCCCCCCEEEEECCHHHCC-CCCCCEEEEEECHHHHHHHHHHHCCC------------ T ss_conf 99826633315279888613331145786799913615237-93515599998999999999971668------------ Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE Q ss_conf 3210334786446664488999999998620-103189999999977999999987479716766882003653178982 Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLK-KMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI 312 (391) Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~-~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~ 312 (391) T Consensus 239 ----------~~s~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~p----~g~~~~~~~~ 300 (351) T pfam00155 239 ----------YSSTH---LQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAG-LSVLPS----QAGFFLLTGL 300 (351) T ss_pred ----------CCCHH---HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCC----CCEEEEEEEC T ss_conf ----------74789---99999999958455689999999999999999999998789-857279----9449999978 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHH-HCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH Q ss_conf 4731011373456788899999888-62828726655676750568615888999999999999 Q gi|254780153|r 313 VDSDIASLDINSQKSFCKSMLSFLE-KEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWL 375 (391) Q Consensus 313 ~d~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aL 375 (391) T Consensus 301 ~~~------------~~~~~~~~Ll~~~gV~v~pG~~fg~~~~iRis~-a~~s~e~i~~~~~rl 351 (351) T pfam00155 301 DPE------------TAKELAQVLLEEVGVYVTPGSSPGVPGWLRITV-AGGTEEELEELLEAI 351 (351) T ss_pred CCC------------CHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEE-CCCCHHHHHHHHHHC T ss_conf 732------------299999999975989997788889999089981-789999999999419 |
|
| >PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.5e-10 Score=85.04 Aligned_cols=316 Identities=16% Similarity=0.071 Sum_probs=196.8 Q ss_pred CCCCC----CCCCCCHHHHHHHHHHHCC--CC-CCCCH---HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH Q ss_conf 88688----8776896899998632103--65-32898---899999999999999968899857999748734899987 Q gi|254780153|r 14 PFFSS----GPCAKRPGWSLGILEGALL--GR-SHRCV---LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391) Q Consensus 14 ~~F~p----GP~~~~p~~v~~~~~~~~l--~~-sHRs~---~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391) T Consensus 45 lnf~SndYLGL~~-~p~-v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~LE~~lA~~~g~e~---allf-~SGy~aN~~~ 118 (395) T PRK06939 45 INFCANNYLGLAN-HPE-LIAAAKAALDSHGFGMASVRFICGTQDLHKELEQKLAKFLGTED---AILY-SSCFDANGGL 118 (395) T ss_pred EEEECCCCCCCCC-CHH-HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHH T ss_conf 9977676557889-989-99999999997299987768574783999999999999869994---9997-5527767889 Q ss_pred HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCC-CCEEEEEEECCCCEE---ECCE Q ss_conf 53205789707997073688888765323876306740577765786767----855-657997420242022---0320 Q gi|254780153|r 84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFD-RDVVFVWNGTTSGVC---VPDV 155 (391) Q Consensus 84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~-~~v~~~h~ETstGv~---~~~~ 155 (391) T Consensus 119 i~aL~~~~d~i~~D~l~--HaSiidG~~ls~a~~~--~f~HnD~~~Le~~L~~~~~~~~~~~~ivtegVfSMdGDiapL~ 194 (395) T PRK06939 119 FETLLGKEDAIISDALN--HASIIDGVRLCKAKRY--RYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIANLP 194 (395) T ss_pred HHHHCCCCCEEEEECCC--CHHHHHHHHHCCCCEE--EECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHH T ss_conf 99964799889984563--5889999986589479--9668999999999996002158628999966777787601599 Q ss_pred EE--ECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC Q ss_conf 35--02568614886401101102---------545-5685799970012001766515445677888765411445778 Q gi|254780153|r 156 GF--IPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL 223 (391) Q Consensus 156 ~~--~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~ 223 (391) T Consensus 195 ~l~~L~~~y~a~L~vDeAH~~GvlG~~G~G~~e~~gl~~~vdi~~gTlsKA~~G~-~Ggfv~g~~~~i~~l~~~~----- 268 (395) T PRK06939 195 EICDLADKYDALVMVDDSHAVGFLGENGRGTVEHCGVMDRVDIITGTLGKALGGA-SGGYTAGKKEVIDWLRQRS----- 268 (395) T ss_pred HHHHHHHHHCEEEEEECCCCEEEECCCCCCHHHHCCCCCCCEEEECCCHHHHHCC-CCCEEECCHHHHHHHHHHC----- T ss_conf 9999999727379861430000345899867998099988689977327666247-6514516678899999847----- Q ss_pred CCHHHCCHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC Q ss_conf 312320011232103347864466-6448899999999862010318999999997799999998747971676688200 Q gi|254780153|r 224 PKIFRMVKGGRVMEGLFCGETINT-PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391) Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~T-P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391) T Consensus 269 -----------------r~~ifStalpp~~~aa~~~al~~~~~~---~~~r~~L~~n~~~~r~~l~~~g~-~~~----~s 323 (395) T PRK06939 269 -----------------RPYLFSNSLAPAIVAASIKVLELLEES---DELRDRLWENARYFREGMTAAGF-TLG----PG 323 (395) T ss_pred -----------------HHHHCCCCCCHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHCCC-CCC----CC T ss_conf -----------------122115799879999999999998749---59999999999999999996799-868----99 Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 3653178982473101137345678889999988862828726655676750---5686158889999999999999999 Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVF 379 (391) Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391) T Consensus 324 ~sp-I~pi~iG~~~-----------~a~~~~~~L~~~Gi~v~~ir~PtVp~g~~rlRi~lta~ht~~did~lv~~l~~v~ 391 (395) T PRK06939 324 EHP-IIPVMLGDAK-----------LAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVG 391 (395) T ss_pred CCC-EEEEEECCHH-----------HHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH T ss_conf 999-7999969999-----------9999999999779748207899889898569988787799999999999999999 Q ss_pred HHH Q ss_conf 999 Q gi|254780153|r 380 YFQ 382 (391) Q Consensus 380 ~~~ 382 (391) T Consensus 392 ~~l 394 (395) T PRK06939 392 KEL 394 (395) T ss_pred HHC T ss_conf 963 |
|
| >PRK07179 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-10 Score=86.43 Aligned_cols=309 Identities=15% Similarity=0.102 Sum_probs=194.0 Q ss_pred CHHHHHHHHHHHCC--CC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE Q ss_conf 96899998632103--65----3289889999999999999996889985799974873489998753205789707997 Q gi|254780153|r 24 RPGWSLGILEGALL--GR----SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391) Q Consensus 24 ~p~~v~~~~~~~~l--~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391) T Consensus 70 hp~-v~~a~~~ai~~~G~g~~~Srl~~G~~~~h~~LE~~LA~~~g~e~---allf-~SGy~AN~g~i~aL~~~~d~I~~D 144 (408) T PRK07179 70 HPD-IIKAQIAALQEYGDGLVMSAVFLHDDSPKPQFEKKLAAFTGFES---GLLC-QSGWAANVGLLQTIADPNTPVYID 144 (408) T ss_pred CHH-HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHHHHHHCCCCCEEEEE T ss_conf 999-99999999998499987468031675899999999999868992---9998-753899999999967999889998 Q ss_pred ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CCC-CCEEEEEEECC---CCEEECCEEE--ECCCCCCEEEEEE Q ss_conf 073688888765323876306740577765786767-855-65799742024---2022032035--0256861488640 Q gi|254780153|r 98 WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DFD-RDVVFVWNGTT---SGVCVPDVGF--IPESREGLVICDA 170 (391) Q Consensus 98 ~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~v~~~h~ETs---tGv~~~~~~~--~~~~~~~llivD~ 170 (391) T Consensus 145 --~~~HaSi~dG~rls~a~~~--~f~HND~~~Le~~L~~~~~~iIv~--egVfSMdGDiapL~~l~~la~~y~a~L~VDE 218 (408) T PRK07179 145 --FFAHMSLWEGVRAAGAQAH--PFRHNDVDHLRRQIERHGPGIIVV--DSVYSTTGTIAPLVDIVDIAEEFGCVLVVDE 218 (408) T ss_pred --CCCCHHHHHHHHHCCCCEE--EECCCCHHHHHHHHHHCCCCEEEE--EECCCCCCCCCCHHHHHHHHHHHCEEEEEEC T ss_conf --8778889876761488579--947999999999998469977999--7423578876689999999987267988614 Q ss_pred CCHHHHC---------CCCC-CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCC Q ss_conf 1101102---------5455-68579997001200176651544567788876541144577831232001123210334 Q gi|254780153|r 171 TSAVFAR---------HIDF-NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLF 240 (391) Q Consensus 171 vSs~g~~---------p~d~-~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (391) T Consensus 219 AH~~Gv~G~~G~G~~~~~gl~~~vdi~~gTlsKA~G~~GG--fi~gs~~~id~L~~~ar--~--~I-------------- 278 (408) T PRK07179 219 SHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGRAG--IITCPAELAEYFPFVSY--P--AI-------------- 278 (408) T ss_pred CCEEEEECCCCCCHHHHCCCCCCCEEEEEEHHHHHHHCCC--CEECCHHHHHHHHHHCC--C--CC-------------- T ss_conf 3505236799987799849987872899371786763766--34237999999997187--7--45-------------- Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC Q ss_conf 78644666448899999999862010318999999997799999998747971676688200365317898247310113 Q gi|254780153|r 241 CGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASL 320 (391) Q Consensus 241 ~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~ 320 (391) T Consensus 279 -fSt--al~P~~~aa~~aal~ii~~~---~~~r~~L~~n~~~~r~~L~~~G~-~i----~~s~sp-Ivpi~~G~~~---- 342 (408) T PRK07179 279 -FSS--TLLPHEIAGLEATLEVIESA---DERRARLHANARFLREGLSELGY-NI----RSSESQ-IIALETGSER---- 342 (408) T ss_pred -CCC--CCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CC----CCCCCC-EEEEECCCHH---- T ss_conf -566--67899999999999998629---99999999999999999983799-97----899999-7999859999---- Q ss_pred CHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 7345678889999988862828726655676750---56861588899999999999999999999987 Q gi|254780153|r 321 DINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQKISF 386 (391) Q Consensus 321 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~~ 386 (391) T Consensus 343 -------~a~~~~~~L~~~Gi~v~~i~~PtVP~g~~rlRislsA~ht~~dId~ll~~l~~~~~e~~l~~ 404 (408) T PRK07179 343 -------NTEVLRDALEERNVFGAVFCAPATPKNRALIRLSLNADLTKSDLDRVLEVCREARDEVDLWF 404 (408) T ss_pred -------HHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC T ss_conf -------99999999997896284167998999981699874877999999999999999999809875 |
|
| >PRK04870 histidinol-phosphate aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.8e-10 Score=83.26 Aligned_cols=296 Identities=16% Similarity=0.127 Sum_probs=180.6 Q ss_pred CHHHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHH Q ss_conf 96899998632103653-28988999999999999999688998579997487348999875320578970799707368 Q gi|254780153|r 24 RPGWSLGILEGALLGRS-HRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFG 102 (391) Q Consensus 24 ~p~~v~~~~~~~~l~~s-HRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~ 102 (391) T Consensus 41 ~~~-v~~ai~~~~~~~~lnrYPd~~--~~~Lr~~lA~~~gv~~~~~Ii~G-nGSdElI~~i~~~~~~pgd~vl~~~Ptf~ 116 (356) T PRK04870 41 PAE-LQAELGERLAEVALNRYPDPR--AAALKAALRAAMGVPAGADVLLG-NGSDELIQLIALACAKPGAKVLAPVPGFV 116 (356) T ss_pred CHH-HHHHHHHHHHCCCCCCCCCCC--HHHHHHHHHHHHCCCCCCEEEEC-CCHHHHHHHHHHHHHCCCCEEEECCCCHH T ss_conf 999-999999975122437798998--99999999998687987769981-67999999999998189898997677766 Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCHHH----CCC--CCCEEEEEEECCCCEEECCEEE--ECCCCCCEEEEEECCH- Q ss_conf 888876532387630674057776578676----785--5657997420242022032035--0256861488640110- Q gi|254780153|r 103 LGWMSDIRQLSLQDVREFTAPYGSLPDFSK----VDF--DRDVVFVWNGTTSGVCVPDVGF--IPESREGLVICDATSA- 173 (391) Q Consensus 103 ~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~--~~~v~~~h~ETstGv~~~~~~~--~~~~~~~llivD~vSs- 173 (391) T Consensus 117 ~Y--~~~a~~~g~~~~~vpl~~d~~~d~~~~~~~i~~~~~klv~i~nPNNPTG~~~~~~~l~~l~~~~~~lvVvDEAY~e 194 (356) T PRK04870 117 MY--RMSAKFAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVYLAYPNNPTGNLFDDADVEAIIAAAPGLVVIDEAYQP 194 (356) T ss_pred HH--HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHH T ss_conf 89--9999982987999846876562128899874146873899768999766336878899998506986552254075 Q ss_pred HHHCC-CC-CCCC-EEE-EECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCC Q ss_conf 11025-45-5685-799-97001200176651--5445677888765411445778312320011232103347864466 Q gi|254780153|r 174 VFARH-ID-FNKL-DVV-TFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINT 247 (391) Q Consensus 174 ~g~~p-~d-~~~i-Dv~-~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T 247 (391) T Consensus 195 F~~~s~~~~~~~~~nlivlRTfSK-~-glaGlRvGy~ia~~~~i~~l~k~~~p-------------------------~~ 247 (356) T PRK04870 195 FAGRSWLPRAAEFPNVLVMRTVSK-L-GLAGLRLGYLAGHPAWIAELDKVRPP-------------------------YN 247 (356) T ss_pred HCCCCCCHHHHCCCCEEEEECCCC-C-CCCCCCEEEEEECHHHHHHHHHHCCC-------------------------CC T ss_conf 567862101203796899860541-0-13656627775099999999773489-------------------------87 Q ss_pred CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-ECCCCCCCCCHHHHH Q ss_conf 6448899999999862010318999999997799999998747971676688200365317898-247310113734567 Q gi|254780153|r 248 PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IVDSDIASLDINSQK 326 (391) Q Consensus 248 P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~d~~~~~~~~~~~~ 326 (391) T Consensus 248 vn~~a~~aa~~aL~---d~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~p------S~aNFil~~~~~------------ 306 (356) T PRK04870 248 VNVLTQATALFALE---HVDVLDAQAAELRAERTRLAAALAALPGVTVFP------SAANFILVRVPD------------ 306 (356) T ss_pred CHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC------CCCEEEEEECCC------------ T ss_conf 33999999999974---958899999999999999999998369978889------988089998899------------ Q ss_pred HHHHHHHHHHHHCCEEECC-CCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 8889999988862828726-655-676750568615888999999999999999 Q gi|254780153|r 327 SFCKSMLSFLEKEEIAYDI-GSY-RDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391) Q Consensus 327 ~~~~~~~~~l~~~g~~~~~-~~~-r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391) T Consensus 307 --a~~l~~~L~~~gIlVR~~~~~~~~~~~~lRIsig---t~een~~ll~aLk~~ 355 (356) T PRK04870 307 --AAAVFDGLKTRRVLVKNVSGMHPLLANCLRVTVG---SPEENAQFLAALKLA 355 (356) T ss_pred --HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECC---CHHHHHHHHHHHHHH T ss_conf --9999999996990999889888889998999839---999999999999985 |
|
| >cd06450 DOPA_deC_like DOPA decarboxylase family | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-10 Score=85.53 Aligned_cols=298 Identities=13% Similarity=0.066 Sum_probs=183.1 Q ss_pred CCCCCCCCHHHHHHHHHHHCCCC----CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---- Q ss_conf 88877689689999863210365----3289889999999999999996889985799974873489998753205---- Q gi|254780153|r 17 SSGPCAKRPGWSLGILEGALLGR----SHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---- 88 (391) Q Consensus 17 ~pGP~~~~p~~v~~~~~~~~l~~----sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---- 88 (391) T Consensus 5 ~~~~~~-~~~-~l~d~l~~~~n~~~~~~~~sP~~t~lE~~vi~wl~~l~g~p~~~~~G~~tsGgs~anl~al~~AR~~~~ 82 (345) T cd06450 5 FVTTMD-PPA-LLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRAR 82 (345) T ss_pred CCCCCC-HHH-HHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHH T ss_conf 758998-999-999999962176787643485899999999999999838997788769827568999999999999998 Q ss_pred --------CCCCE-EEEE--ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCC-----------CCEEEEEEEC Q ss_conf --------78970-7997--073688888765323876306740577765786767855-----------6579974202 Q gi|254780153|r 89 --------GYRGV-DVLA--WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDFD-----------RDVVFVWNGT 146 (391) Q Consensus 89 --------~~~~~-~~~~--~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~v~~~h~ET 146 (391) T Consensus 83 ~~~~~~~~~~~~~~~v~~s~~aH~Sv~---KAa~ilg~~~~~vp~d~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT 159 (345) T cd06450 83 KRLKAGGGRGIDKLVIVCSDQAHVSVE---KAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTT 159 (345) T ss_pred HHHHHCCCCCCCCEEEEECCCCCHHHH---HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC T ss_conf 888741677888769998897528999---99997489769975399980889999999999986699738999557876 Q ss_pred CCCEEECCEEE--ECCCCCCEEEEEECCHHHHCCCC--------CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHH Q ss_conf 42022032035--02568614886401101102545--------568579997001200176651544567788876541 Q gi|254780153|r 147 TSGVCVPDVGF--IPESREGLVICDATSAVFARHID--------FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEK 216 (391) Q Consensus 147 stGv~~~~~~~--~~~~~~~llivD~vSs~g~~p~d--------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~ 216 (391) T Consensus 160 ~~GaiD~l~~i~~i~~~~~iwlHVDaA~GG~~~~~~~~~~~~~gie~aDSit~d~HK~l~~p~~~~~~l~r--a------ 231 (345) T cd06450 160 DTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR--A------ 231 (345) T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEECHHCCHHHCCCCCCHHHCCCCCCCEEEECCHHCCCCCCCCEEEEHH--H------ T ss_conf 76256789999999998499477510001201106220076579999888998812224878882688618--8------ Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 14457783123200112321033478644666448899999999862010318999999997799999998747971676 Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296 (391) Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~ 296 (391) T Consensus 232 ---------------------------------l-klw---~~l~~~G-~~g~~~~i~~~~~~a~~l~~~l~~~~~~el~ 273 (345) T cd06450 232 ---------------------------------L-KLW---ATLRRFG-RDGYGEHIDRIVDLAKYLAELIRADPGFELL 273 (345) T ss_pred ---------------------------------H-HHH---HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE T ss_conf ---------------------------------8-999---9999998-9999999999999999999999629898996 Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC-EEEEECCCCC-CHHHHHHHHHH Q ss_conf 688200365317898247310113734567888999998886282872665567675-0568615888-99999999999 Q gi|254780153|r 297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPL-GLRVWVGVTV-EKEDLLLLCDW 374 (391) Q Consensus 297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~-~~RIg~~g~i-~~~dv~~L~~a 374 (391) T Consensus 274 ~~-p---~l~iV~Fr~~~~~~~--d-----~~~~~l~~~l~~~g~~~-vs~t~~~g~~~lR~~i~n~~tt~~di~~l~~~ 341 (345) T cd06450 274 GE-P---NLSLVCFRLKPSVKL--D-----ELNYDLSDRLNERGGWH-VPATTLGGPNVLRFVVTNPLTTRDDADALLED 341 (345) T ss_pred CC-C---CEEEEEEEECCCHHC--C-----HHHHHHHHHHHHCCCEE-EEEEEECCEEEEEEEECCCCCCHHHHHHHHHH T ss_conf 69-9---658999997682011--4-----89999999998139999-86159999789999979999999999999999 Q ss_pred HHH Q ss_conf 999 Q gi|254780153|r 375 LRW 377 (391) Q Consensus 375 Le~ 377 (391) T Consensus 342 i~~ 344 (345) T cd06450 342 IER 344 (345) T ss_pred HHH T ss_conf 974 |
This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine. |
| >PRK13393 5-aminolevulinate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4e-10 Score=83.76 Aligned_cols=315 Identities=17% Similarity=0.097 Sum_probs=193.4 Q ss_pred CCCC----CCCCCCHHHHHHHHHHHCC--CCCCCC----HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH Q ss_conf 8688----8776896899998632103--653289----88999999999999999688998579997487348999875 Q gi|254780153|r 15 FFSS----GPCAKRPGWSLGILEGALL--GRSHRC----VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMAL 84 (391) Q Consensus 15 ~F~p----GP~~~~p~~v~~~~~~~~l--~~sHRs----~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~ 84 (391) T Consensus 49 ~f~SNdYLGL~~-~p~-v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~LE~~LA~~~g~e~---allf-~SGy~AN~g~i 122 (404) T PRK13393 49 VWCSNDYLGMGQ-HPA-VLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA---ALLF-TSGYVSNWAAL 122 (404) T ss_pred EEECCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHHH T ss_conf 877434457678-999-99999999998689987660201887999999999999869991---9998-74488899999 Q ss_pred HHCCCC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH----CCCCCCEEEEEEECCCCEE---ECCE Q ss_conf 320578--970799707368888876532387630674057776578676----7855657997420242022---0320 Q gi|254780153|r 85 WSLLGY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK----VDFDRDVVFVWNGTTSGVC---VPDV 155 (391) Q Consensus 85 ~nl~~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~v~~~h~ETstGv~---~~~~ 155 (391) T Consensus 123 ~aL~~~~~~d~i~~D--~l~HaSi~dG~rls~a~~~~--f~HnD~~~Le~~L~~~~~~~~-~lIv~egVfSMdGDiapL~ 197 (404) T PRK13393 123 STLASRLPGCVILSD--ELNHASMIEGIRHSRAETRI--FRHNDPADLERKLSDLDPHAP-KLVAFESVYSMDGDIAPIA 197 (404) T ss_pred HHHHCCCCCCEEEEE--CCCCHHHHHHHHHCCCCEEE--EECCCHHHHHHHHHHCCCCCC-CEEEEEEECCCCCCCCCHH T ss_conf 998578999789998--75459899988854798799--827999999999985622488-0899965535578856899 Q ss_pred EE--ECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC Q ss_conf 35--02568614886401101102---------545-5685799970012001766515445677888765411445778 Q gi|254780153|r 156 GF--IPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL 223 (391) Q Consensus 156 ~~--~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~ 223 (391) T Consensus 198 el~~L~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~gl~~~vdi~~gTfsKA~Gs~Gg--~v~gs~~~id~L~~~ar~--- 272 (404) T PRK13393 198 EICDVADKHGAMTYLDEVHAVGLYGPRGGGIAERDGLADRLTIIEGTLAKAFGVVGG--YITGSAALCDFIRSFASG--- 272 (404) T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCC--EEECCHHHHHHHHHHCHH--- T ss_conf 999999740949998443200103689987888738988762899717764335775--031476889999984728--- Q ss_pred CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 31232001123210334786446664488999999998620103189999999977999999987479716766882003 Q gi|254780153|r 224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR 303 (391) Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r 303 (391) T Consensus 273 -~I---------------fSta--lpP~~~aa~~~al~~l~~~---~~~r~~L~~n~~~~r~~L~~~G~-~~~----~s~ 326 (404) T PRK13393 273 -FI---------------FTTS--LPPAVAAGALASIRHLKAS---SAERERHQDRVARLRARLDQAGV-PHM----DNP 326 (404) T ss_pred -HH---------------HCCC--CCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CCC----CCC T ss_conf -65---------------2779--8899999999999998619---69999999999999999996699-978----999 Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 653178982473101137345678889999988862-828726655676750---5686158889999999999999999 Q gi|254780153|r 304 SNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVF 379 (391) Q Consensus 304 S~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391) T Consensus 327 s~-Iipi~ig~~~-----------~a~~~~~~Ll~~~Gi~v~~i~~PtVP~g~~rLRi~lsA~ht~~did~l~~~L~~v~ 394 (404) T PRK13393 327 SH-IVPVMVGDAV-----------LCKQISDLLLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIW 394 (404) T ss_pred CC-EEEEEECCHH-----------HHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH T ss_conf 88-7999969999-----------99999999986189899988898589997359987688799999999999999999 Q ss_pred HHHH Q ss_conf 9999 Q gi|254780153|r 380 YFQK 383 (391) Q Consensus 380 ~~~k 383 (391) T Consensus 395 ~~lg 398 (404) T PRK13393 395 ARLG 398 (404) T ss_pred HHCC T ss_conf 9839 |
|
| >PRK00950 histidinol-phosphate aminotransferase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.1e-10 Score=81.49 Aligned_cols=310 Identities=15% Similarity=0.113 Sum_probs=184.7 Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC Q ss_conf 8868887768-968999986321036532898899999999999999968899857999748734899987532057897 Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG 92 (391) Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~ 92 (391) T Consensus 38 i~ls~nenp~gp~p~v~~a~~~~~~-~~~~YPd~~--~~~Lr~aiA~~~gv~~e-~ii~~gnGs~e~i~~l~~~~~~~Gd 113 (369) T PRK00950 38 IKLGSNENPLGPSPKAVEALIDEAP-NIHQYPEPD--APELREAISKYTGVPVE-NIIVGGDGADEIIDVLMRILIDEGD 113 (369) T ss_pred EEECCCCCCCCCCHHHHHHHHHHHH-CCCCCCCCC--HHHHHHHHHHHHCCCCC-CEEEECCCHHHHHHHHHHHHHCCCC T ss_conf 8812989986788999999998753-258799988--89999999998681975-8799756499999999999957999 Q ss_pred EEEEEECCHHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE--ECCCCC Q ss_conf 07997073688888765323876306740--577765786767-----855657997420242022032035--025686 Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF--IPESRE 163 (391) Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~--~~~~~~ 163 (391) T Consensus 114 ~vl~~~P~y~~Y--~~~a~~~G~~~~~v~~~~~~~f~~d~~~l~~~i~~~tklv~l~nPnNPTG~~~~~~el~~l~~~~~ 191 (369) T PRK00950 114 EVIIPIPTFTYY--EISARACGAKPVYAKFDREEDFKLDVESVLNAITDKTKIIFLCTPNNPTGNLIPEEDIRKIVESTD 191 (369) T ss_pred EEEECCCCCHHH--HHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHCCC T ss_conf 999898873036--999998398202236771249988999999736767608998089998783247999878987188 Q ss_pred CEEEEEECCH-HHHCCC-----CCCCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH Q ss_conf 1488640110-110254-----5568579997001200176651--5445677888765411445778312320011232 Q gi|254780153|r 164 GLVICDATSA-VFARHI-----DFNKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391) Q Consensus 164 ~llivD~vSs-~g~~p~-----d~~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391) T Consensus 192 ~~vv~DEaY~ef~~~~~~~l~~~~~n~-iv~~SfSK~~~-laGlRlGy~i~~~~li~~l~~~~~---------------- 253 (369) T PRK00950 192 ALVFVDEAYIEFAEYDLTELALEYDNV-LVLRTFSKVFG-LAGMRIGYGIMPKWIIEYMMRIKP---------------- 253 (369) T ss_pred EEEEECCCHHHHCCCCHHHHHHHCCCE-EEEEECCHHHH-CCCCEEEEEECCHHHHHHHHHHCC---------------- T ss_conf 799942426752579715678745865-89841215540-577504676469999999998568---------------- Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECC Q ss_conf 103347864466644889999999986201031899999999779999999874797167668820036531789-8247 Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVD 314 (391) Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d 314 (391) T Consensus 254 ---------~~~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~l~~~~v~p------s~anFil~~~~~ 315 (369) T PRK00950 254 ---------PFSLTRLSQAAAIAALR---DKEFIEKSIELGIESREYLYEGLKKFKPLKVYP------SEANYVLVDVKP 315 (369) T ss_pred ---------CCCHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC------CCCEEEEEECCC T ss_conf ---------75706999999999950---958899999999999999999998579977878------986189998999 Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 310113734567888999998886282872665-5676750-5686158889999999999999999 Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVF 379 (391) Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391) T Consensus 316 ~-~----------~~~~~~~~Ll~~gI~Vr~g~~f~~~~~~~iRisig---t~~en~~ll~al~~il 368 (369) T PRK00950 316 G-M----------TAKEFTEELLKKGVIVRDCTSFEGLGDYYIRVSIG---TLEENERFLEILKEIV 368 (369) T ss_pred C-C----------CHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEC---CHHHHHHHHHHHHHHH T ss_conf 9-9----------99999999996995999687777789898999808---9999999999999985 |
|
| >TIGR00858 bioF 8-amino-7-oxononanoate synthase; InterPro: IPR004723 8-amino-7-oxononanoate synthase (2 | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.5e-11 Score=88.74 Aligned_cols=303 Identities=14% Similarity=0.047 Sum_probs=200.4 Q ss_pred CCCCHHHHHHH-HHHHCC--C----CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC---- Q ss_conf 76896899998-632103--6----532898899999999999999968899857999748734899987532057---- Q gi|254780153|r 21 CAKRPGWSLGI-LEGALL--G----RSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG---- 89 (391) Q Consensus 21 ~~~~p~~v~~~-~~~~~l--~----~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~---- 89 (391) T Consensus 37 a~-hp~-l~~af~~~~~~~~G~Gs~aSrLv~G~~~~H~~LE~~lA~~kg~Ea--ALlF--sSGY~AN~Gvi~aL~~~~~l 110 (378) T TIGR00858 37 AS-HPE-LIQAFAQQAAEQYGAGSTASRLVTGNSPLHEELEEELAEFKGTEA--ALLF--SSGYLANVGVISALVGKRVL 110 (378) T ss_pred CC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--EEEE--HHHHHHHHHHHHHHHHCCCC T ss_conf 37-988-999999999986687736743403785689999999998628820--3420--02789999999987515765 Q ss_pred -CCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECC---EE--EEC Q ss_conf -89707997073688888765323876306740577765786767----855657997420242022032---03--502 Q gi|254780153|r 90 -YRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPD---VG--FIP 159 (391) Q Consensus 90 -~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~---~~--~~~ 159 (391) T Consensus 111 ~~~Dli--lsD~LNHASl~dG~rLS~A~~~~--y~H~D~~~L~~lL~~~~g~~~~~livTDGVFSMDGD~APL~~L~~la 186 (378) T TIGR00858 111 EKGDLI--LSDALNHASLIDGCRLSGARVLR--YRHNDVEHLERLLEKNRGKERRKLIVTDGVFSMDGDIAPLPQLVALA 186 (378) T ss_pred CCCCEE--EEHHHHHHHHHHHHHCCCCCEEE--CCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCHHHHHHHH T ss_conf 678604--42025477789864159862787--06899899999997401513776889700131688848978999999 Q ss_pred CCCCCEEEEE--------ECCHHHHC-CCC--CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHH Q ss_conf 5686148864--------01101102-545--568579997001200176651544567788876541144577831232 Q gi|254780153|r 160 ESREGLVICD--------ATSAVFAR-HID--FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391) Q Consensus 160 ~~~~~llivD--------~vSs~g~~-p~d--~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391) T Consensus 187 ~~~~A~L~VDDAHgtGVlG~~G~G~~~~fgl~~~~~~i~~GTlSKAlGs~Ga--~V~g~~~l~~yL~n~A---------- 254 (378) T TIGR00858 187 ERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPAPVDIQVGTLSKALGSYGA--YVAGSEALIDYLINRA---------- 254 (378) T ss_pred HHCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCHHHHHCHH--HHHHHHHHHHHHHHCC---------- T ss_conf 8709889998654536628875414976598888726998613166540525--6354589999998415---------- Q ss_pred CCHHHHHHCCCCCCCCCC---CCCHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC Q ss_conf 001123210334786446---664488999999998620-1031899999999779999999874797167668820036 Q gi|254780153|r 229 MVKGGRVMEGLFCGETIN---TPSLLCIEDYIDALLWLK-KMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRS 304 (391) Q Consensus 229 ~~~~~~~~~~~~~~~~~~---TP~v~~i~al~~~l~~i~-~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS 304 (391) T Consensus 255 -------------R~~If~TaLPPa-~~aA~~aAl~~i~~~~---~~rr~~L~~~~~~~~~~l~~~~~~~f-~~-~~~~T 315 (378) T TIGR00858 255 -------------RTFIFSTALPPA-VVAAALAALELIQEEE---PWRREKLLALIARLRKGLEALGKLVF-QL-MPSET 315 (378) T ss_pred -------------CCCEECCCCCHH-HHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHCCCCCC-EE-CCCCC T ss_conf -------------764232366588-9999999999722248---64789999999999999875476631-01-67898 Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHH Q ss_conf 53178982473101137345678889999988862828726655676750---5686158889999999999999 Q gi|254780153|r 305 NTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLR 376 (391) Q Consensus 305 ~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe 376 (391) T Consensus 316 P-I~P~~~G~~~~a--------l---~~a~~L~~~G~~v~AIRPPTVP~G~sRLR~Tl~A~Ht~~di~~L~~~l~ 378 (378) T TIGR00858 316 P-IVPVIIGDEESA--------L---ALAEELQEQGIFVGAIRPPTVPKGTSRLRLTLSAAHTEGDIDRLLEALK 378 (378) T ss_pred C-CEEEEECCCHHH--------H---HHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCC T ss_conf 6-258870892899--------9---9999998779479102588887796104557740489889999999739 |
3.1.47 from EC) is involved in biotin biosynthesis. Synonym(s): AONS, 8-amino-7-ketopelargonate synthase, 7-keto-8-amino-pelargonic acid synthetase, 7-KAP synthetase; GO: 0008710 8-amino-7-oxononanoate synthase activity, 0009102 biotin biosynthetic process. |
| >PRK09064 5-aminolevulinate synthase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-09 Score=80.55 Aligned_cols=318 Identities=16% Similarity=0.086 Sum_probs=193.8 Q ss_pred CCCCC----CCCCCCHHHHHHHHHHHCC--CCCCC-C---HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH Q ss_conf 88688----8776896899998632103--65328-9---8899999999999999968899857999748734899987 Q gi|254780153|r 14 PFFSS----GPCAKRPGWSLGILEGALL--GRSHR-C---VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391) Q Consensus 14 ~~F~p----GP~~~~p~~v~~~~~~~~l--~~sHR-s---~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391) T Consensus 48 ~~FsSNdYLGLs~-~p~-v~~a~~~a~~~~G~gs~gSrl~~G~~~~h~~LE~~LA~~~g~e~---allf-~SGy~AN~g~ 121 (406) T PRK09064 48 TVWCSNDYLGMGQ-HPK-VIEAMHEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA---ALVF-TSGYVSNDAT 121 (406) T ss_pred EEEECCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHH T ss_conf 9846544357779-999-99999999998489987777040587999999999999858885---8997-7417888999 Q ss_pred HHHCCCC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEE---CC Q ss_conf 5320578--9707997073688888765323876306740577765786767----8556579974202420220---32 Q gi|254780153|r 84 LWSLLGY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCV---PD 154 (391) Q Consensus 84 ~~nl~~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~---~~ 154 (391) T Consensus 122 i~aL~~~~p~~~i~~D--~l~HASiidG~rls~a~~~~--f~HND~~~Le~~L~~~~~~~~~-iIvtEgVfSMdGDiapL 196 (406) T PRK09064 122 LSTLAKLIPGCVIFSD--ELNHASMIEGIRRSGAEKHI--FRHNDVAHLEELLAAADPDRPK-LIAFESVYSMDGDIAPI 196 (406) T ss_pred HHHHHCCCCCCEEEEE--CCCCHHHHHHHHHCCCCEEE--ECCCCHHHHHHHHHHCCCCCCE-EEEEEECCCCCCCCCCH T ss_conf 9998567999689981--42332489998755995899--4799989999999837778970-99997000167876579 Q ss_pred EE--EECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC Q ss_conf 03--502568614886401101102---------545-568579997001200176651544567788876541144577 Q gi|254780153|r 155 VG--FIPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP 222 (391) Q Consensus 155 ~~--~~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~ 222 (391) T Consensus 197 ~~l~~l~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~g~~~~vdi~~gTfsKA~Gs~Gg--fv~gs~~~id~L~~~ar-~- 272 (406) T PRK09064 197 AEICDLADKYNAMTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMGG--YIAGSASLIDAVRSYAP-G- 272 (406) T ss_pred HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCE--EECCCHHHHHHHHHHCC-C- T ss_conf 9999999860959999622102203688877398729866670799216652357750--43178899999987185-3- Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC Q ss_conf 83123200112321033478644666448899999999862010318999999997799999998747971676688200 Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETT 302 (391) Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~ 302 (391) T Consensus 273 --~---------------IfSta--lpp~~~aa~~~al~~l~~~---~~~r~~L~~n~~~~r~~l~~~G~-~~-~---~s 325 (406) T PRK09064 273 --F---------------IFTTS--LPPAIAAAALASIRHLKES---NEERERHQERAAKLKASLDAAGI-PV-M---PN 325 (406) T ss_pred --C---------------CCCCC--CCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CC-C---CC T ss_conf --0---------------02678--9999999999999998709---07789999999999986774499-74-7---99 Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC-CEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 3653178982473101137345678889999988862-828726655676750---568615888999999999999999 Q gi|254780153|r 303 RSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKE-EIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWV 378 (391) Q Consensus 303 rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391) T Consensus 326 ~sp-Iipi~ig~~~-----------~~~~~~~~Ll~~~Gi~v~~I~~PtVP~g~~rLRi~l~a~ht~edid~l~~~L~ev 393 (406) T PRK09064 326 PSH-IVPVIVGDPE-----------KCKKASDRLLEEHGIYVQPINYPTVPRGTERLRITPTPLHTDEMIDHLVEALVEV 393 (406) T ss_pred CCC-EEEEEECCHH-----------HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH T ss_conf 998-7999959999-----------9999999999868987810889988999846998868669999999999999999 Q ss_pred HHHHHHH Q ss_conf 9999998 Q gi|254780153|r 379 FYFQKIS 385 (391) Q Consensus 379 ~~~~k~~ 385 (391) T Consensus 394 ~~~~g~~ 400 (406) T PRK09064 394 WARLGLP 400 (406) T ss_pred HHHCCCC T ss_conf 9980998 |
|
| >PRK05937 8-amino-7-oxononanoate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.8e-09 Score=79.59 Aligned_cols=311 Identities=13% Similarity=0.039 Sum_probs=182.8 Q ss_pred CCCCCC----CCCCCCHHHHHHHHHHHCC-----------CC-CCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC Q ss_conf 888688----8776896899998632103-----------65-3289-88999999999999999688998579997487 Q gi|254780153|r 13 RPFFSS----GPCAKRPGWSLGILEGALL-----------GR-SHRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPAS 75 (391) Q Consensus 13 ~~~F~p----GP~~~~p~~v~~~~~~~~l-----------~~-sHRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~Gs 75 (391) T Consensus 6 ~lnFsSNDYLGLs~-~p~-v~~a~~~a~~~y~~~~~~~g~Gs~gSrl~~G~~~~h~~LE~~lA~f~g~e~---allf-~s 79 (370) T PRK05937 6 SIDFVTNDFLGFSR-STT-LVHEVEKRYRLYCEQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---AFIV-PS 79 (370) T ss_pred EEECCCCCCCCCCC-CHH-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CC T ss_conf 78240320038789-989-999999999987312578987686878262786999999999999869993---9998-76 Q ss_pred CHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----C-CCCCEEEEEEECCCCE Q ss_conf 3489998753205789707997073688888765323876306740577765786767----8-5565799742024202 Q gi|254780153|r 76 DTGAVEMALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----D-FDRDVVFVWNGTTSGV 150 (391) Q Consensus 76 gT~~~ea~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~-~~~~v~~~h~ETstGv 150 (391) T Consensus 80 Gy~AN~~~i~al~~~~d~i~~D~l~Ha--Si~dG~rls~a~~~~--f~Hnd~~~Le~~L~~~~~~~~~~~~iv~egVfSM 155 (370) T PRK05937 80 GYMANLGLCAHLSSVTDYVLWDEQVHI--SVVYSLSVISGKHQS--FRHNDLDHLESLLESCRAVSFGRIFIFVCSVYSF 155 (370) T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCHH--HHHHHHHHCCCCEEE--ECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC T ss_conf 688999999960899998999630619--999999864998699--6899989999999853311788559999405667 Q ss_pred ---EECCEEE--ECCCCCCEEEEEECCHHHHC---------CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHH Q ss_conf ---2032035--02568614886401101102---------545568579997001200176651544567788876541 Q gi|254780153|r 151 ---CVPDVGF--IPESREGLVICDATSAVFAR---------HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEK 216 (391) Q Consensus 151 ---~~~~~~~--~~~~~~~llivD~vSs~g~~---------p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~ 216 (391) T Consensus 156 dGdiapL~~l~~l~~~y~a~l~vDeAH~~Gv~G~~GrG~~e~~g~~~~~~i~~TlsKAlGs~G--gfv~~s~~~i~~l~~ 233 (370) T PRK05937 156 KGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--AALLSSSEVKQDLML 233 (370) T ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCHHCCCCCCCCCCHHHHCCCCCCCEEEEEHHHHHHHCC--EEEECCHHHHHHHHH T ss_conf 787558999999999819789973300004337999757887399887789813256621065--389828899999998 Q ss_pred CCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 14457783123200112321033478644666448899999999862010318999999997799999998747971676 Q gi|254780153|r 217 YVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENL 296 (391) Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~ 296 (391) T Consensus 234 ~--ar~--~I---------------fSt--alpP~~~aa~~~al~~l~~e~--~~~r~~l~~~~~~~~~~~~~------- 283 (370) T PRK05937 234 N--SPP--LR---------------YST--GLPPHALISIQVAYDFLSQEG--ELARKQLFRLKEYFAQKFSS------- 283 (370) T ss_pred H--CCC--CC---------------CCC--CCCHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHCCC------- T ss_conf 3--964--00---------------367--558999999999999998595--99999999999999985066------- Q ss_pred CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH Q ss_conf 68820036531789824731011373456788899999888628287266556767505686158889999999999999 Q gi|254780153|r 297 AVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR 376 (391) Q Consensus 297 ~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe 376 (391) T Consensus 284 ----~~~~~-i~pI~~~~~------------~~~~~~~~L~~~Gi~v~~Ir~PtVPr-LRi~l~A~HT~edId~Lv~~L~ 345 (370) T PRK05937 284 ----AAPGC-VQPIFLPDI------------SEQELYSKLVETGIRVGVVCFPTKPF-LRVNLHAFNTEDEVDILVSVLH 345 (370) T ss_pred ----CCCCC-EEEEEECCH------------HHHHHHHHHHHCCEEEEEECCCCCCE-EEEECCCCCCHHHHHHHHHHHH T ss_conf ----78997-488980838------------99999999997897798689899883-7886186669999999999999 Q ss_pred HHHHHHH Q ss_conf 9999999 Q gi|254780153|r 377 WVFYFQK 383 (391) Q Consensus 377 ~~~~~~k 383 (391) T Consensus 346 ~~~~~~~ 352 (370) T PRK05937 346 SYLEKCQ 352 (370) T ss_pred HHHHHHH T ss_conf 9999986 |
|
| >PRK07310 consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-09 Score=80.86 Aligned_cols=321 Identities=10% Similarity=0.032 Sum_probs=174.5 Q ss_pred HHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC Q ss_conf 6899998632103----653289889999999999999996889985799974873489998753205789707997073 Q gi|254780153|r 25 PGWSLGILEGALL----GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES 100 (391) Q Consensus 25 p~~v~~~~~~~~l----~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~ 100 (391) T Consensus 45 p~~i~~a~~~a~~~~~~~~Y~~~~G~~~lR~Aia~~~~~~~g~~v~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~ 124 (395) T PRK07310 45 PKNIQDAAIESIENGRASFYTVASGLPELKAAIATYFENFYGYHLSPNQIVVGTGAKFILYAFFMAVLNPGDEVIIPTPY 124 (395) T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCC T ss_conf 99999999999828988878997473999999999989987899883209987788999999999974999989983787 Q ss_pred HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCC-----CCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEE Q ss_conf 68888876532387630674-05777657867678-----55657997420242022032035-----025686148864 Q gi|254780153|r 101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVD-----FDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICD 169 (391) Q Consensus 101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~-----~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD 169 (391) T Consensus 125 Y~~y-~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~a~~~~i~visD 203 (395) T PRK07310 125 WVSY-SDQVKMAEGVPVFVQAKEENHFKVTVEQLEAARTSKTKVVLLNSPSNPTGMIYSAEELRAIGEWAVEHDILILAD 203 (395) T ss_pred CCCH-HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEC T ss_conf 7546-999997599899975674457450499999746589749998999798562663541467765565268799943 Q ss_pred ECCH---HHHC---CC-----CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH Q ss_conf 0110---1102---54-----556857999700120017665--154456778887654114457783123200112321 Q gi|254780153|r 170 ATSA---VFAR---HI-----DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391) Q Consensus 170 ~vSs---~g~~---p~-----d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391) T Consensus 204 EiY~~l~~~g~~~~p~~~~~~~~~~~~i~~~s~SK~f~-~~G~RiG~~v~~~~~i~~~~~~~------------------ 264 (395) T PRK07310 204 DIYGRLVYNGNQFTPISSLSEAIRKQTIVINGVSKTYA-MTGWRVGFAVGEPEIISAMSKIA------------------ 264 (395) T ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCC-CCCCEEEEEECCHHHHHHHHHHH------------------ T ss_conf 65210014898888888841243257358840123567-76654899977999999999998------------------ Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789824731 Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316 (391) Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391) T Consensus 265 -----~~~~~~~~~~~q~aa~~al~~~~--~~~~~~~~~~~~r~~~~~~~l~~~~g~~~~~P~g~~~----~w~~~~~~- 332 (395) T PRK07310 265 -----GQTTSNLTAVSQYAAIEAFTGSQ--SSVEEMRLAFEERLNIIYPLLAQVPGFEVVKPQGAFY----LFPNVKKA- 332 (395) T ss_pred -----HHHCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEE----EEEECCCH- T ss_conf -----65047813899999999996888--9999999999999999999873089968726986689----81666511- Q ss_pred CCCCCHHHHHHHHHHHHHH-HHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 0113734567888999998-886282872665567675056861588899999999999999999999 Q gi|254780153|r 317 IASLDINSQKSFCKSMLSF-LEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391) Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391) T Consensus 333 ~~~~g~~d----~~~~~~~ll~~~gV~v~PG~~FG~~~~vRl~~a--~~~~~l~eal~RL~~~l~s~~ 394 (395) T PRK07310 333 MEMKGYTD----VTDFTTAILEEVGVALVTGAGFGAPENVRLSYA--TDLETLKEAVRRLHVFMESNE 394 (395) T ss_pred HCCCCCCC----HHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEC--CCHHHHHHHHHHHHHHHHHCC T ss_conf 12478898----999999999849999988976699998899980--999999999999999998777 |
|
| >PRK13392 5-aminolevulinate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.2e-09 Score=77.99 Aligned_cols=315 Identities=18% Similarity=0.144 Sum_probs=191.0 Q ss_pred CCCCC----CCCCCCHHHHHHHHHHHCC--CCC---CCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH Q ss_conf 88688----8776896899998632103--653---289-8899999999999999968899857999748734899987 Q gi|254780153|r 14 PFFSS----GPCAKRPGWSLGILEGALL--GRS---HRC-VLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMA 83 (391) Q Consensus 14 ~~F~p----GP~~~~p~~v~~~~~~~~l--~~s---HRs-~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~ 83 (391) T Consensus 49 l~f~SNdYLGLs~-~p~-v~~a~~~a~~~yG~gs~gSrl~~G~~~~h~~LE~~LA~f~g~e~---allf-~SGy~AN~g~ 122 (410) T PRK13392 49 TIWCSNDYLGMGQ-HPD-VIGAMVDALDRYGAGAGGTRNISGTSHEHVLLERELADLHGKQS---ALLF-TSGYVSNDAA 122 (410) T ss_pred EEEECCCCCCCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---EEEE-CCHHHHHHHH T ss_conf 8977566657789-999-99999999998099987758562787999999999999869992---9997-6647888999 Q ss_pred HHHCCCC--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECC---CCEEECC Q ss_conf 5320578--9707997073688888765323876306740577765786767----85565799742024---2022032 Q gi|254780153|r 84 LWSLLGY--RGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTT---SGVCVPD 154 (391) Q Consensus 84 ~~nl~~~--~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETs---tGv~~~~ 154 (391) T Consensus 123 i~aL~~~~~~d~i~~--D~l~HaSiidG~rlS~a~~~~--f~HnD~~~Le~~L~~~~~~~~-~~IvtEgVfSMdGd~apL 197 (410) T PRK13392 123 LSTLARLLPNCLILS--DALNHASMIEGIRRSGAEKQV--WAHNDLADLERQLASVDPDRP-KLICFESCYSMDGDFAPM 197 (410) T ss_pred HHHHHCCCCCCEEEE--CCCCCHHHHHHHHHCCCCEEE--ECCCCHHHHHHHHHHCCCCCC-EEEEECCCCCCCCCCCCH T ss_conf 999827799979998--731228899878755895899--718998999999975666785-599972531247886899 Q ss_pred EE--EECCCCCCEEEEEECCHHHHC---------CCC-CCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCC Q ss_conf 03--502568614886401101102---------545-568579997001200176651544567788876541144577 Q gi|254780153|r 155 VG--FIPESREGLVICDATSAVFAR---------HID-FNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWP 222 (391) Q Consensus 155 ~~--~~~~~~~~llivD~vSs~g~~---------p~d-~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~ 222 (391) T Consensus 198 ~~l~~L~~~y~a~L~VDeAH~~GvlG~~GrG~~e~~g~~~~vdi~~gTlsKA~Gs~Gg--fv~gs~~~id~l~~~a---- 271 (410) T PRK13392 198 AAICDLAEKYNAFTYVDEVHAVGLYGPRGGGIAERDGLMDRIDMFQGTLSKAFGCLGG--YIAASADLVDFVRSFA---- 271 (410) T ss_pred HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCE--EEECCHHHHHHHHHHC---- T ss_conf 9999999984959996131002413589987799728987667998506541236760--3423737789998738---- Q ss_pred CCCHHHCCHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 8312320011232103347864466-644889999999986201031899999999779999999874797167668820 Q gi|254780153|r 223 LPKIFRMVKGGRVMEGLFCGETINT-PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391) Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~T-P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391) T Consensus 272 ------------------r~~IfStalpP~~~aa~~~al~~l~~~---~~~r~~L~~~~~~lr~~l~~~g~-~~~---~- 325 (410) T PRK13392 272 ------------------PGFIFTTALPPPVVAGARAALRHLKTS---QWERDAHQDRTASLKAKLNANGI-PVL---P- 325 (410) T ss_pred ------------------CCCCCCCCCCHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHCCC-CCC---C- T ss_conf ------------------754366678999999999999998719---58899999999999999986799-848---9- Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHH Q ss_conf 03653178982473101137345678889999988-862828726655676750---56861588899999999999999 Q gi|254780153|r 302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRW 377 (391) Q Consensus 302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~ 377 (391) T Consensus 326 s~s~-Iipi~ig~~~~-----------a~~~~~~ll~e~Gi~v~~i~~PtVP~g~~rLRi~lsA~Ht~~dId~l~~~L~~ 393 (410) T PRK13392 326 SPSH-IVPVMVGDPEK-----------CKAISDLLMAEHGIYIQPINYPTVPRGTERLRITPSPLHTDEDIDALVAALVA 393 (410) T ss_pred CCCC-EEEEEECCHHH-----------HHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH T ss_conf 9998-79999799999-----------99999999875998998678883799974498775866899999999999999 Q ss_pred HHHHHH Q ss_conf 999999 Q gi|254780153|r 378 VFYFQK 383 (391) Q Consensus 378 ~~~~~k 383 (391) T Consensus 394 v~~e~g 399 (410) T PRK13392 394 IWRELA 399 (410) T ss_pred HHHHCC T ss_conf 999809 |
|
| >PRK02731 histidinol-phosphate aminotransferase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.8e-09 Score=79.55 Aligned_cols=297 Identities=19% Similarity=0.157 Sum_probs=178.7 Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHH Q ss_conf 89999863210365328988999999999999999688998579997487348999875320578970799707368888 Q gi|254780153|r 26 GWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLGW 105 (391) Q Consensus 26 ~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r~ 105 (391) T Consensus 48 ~~v~~ai~~~~~~-~~~YPd~~~--~~Lr~aiA~~~~v~~~-~Ilv-~nGs~e~i~l~~~a~~~pgd~Vl~~~P~f~~Y- 121 (367) T PRK02731 48 PKAIEAIRAAADE-LHRYPDGSG--FELKAALAEKFGVDPE-QIIL-GNGSDEILELLARAYLGPGDEVIYSEHAFAVY- 121 (367) T ss_pred HHHHHHHHHHHHH-HCCCCCCCH--HHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCCCEEEECCCCHHHH- T ss_conf 9999999987755-115959878--9999999999785811-1998-57899999999999847998644479862689- Q ss_pred HHHHHHCCCCCEEEEECCCCCCCCHHHC----C-CCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECCH-HH Q ss_conf 8765323876306740577765786767----8-55657997420242022032035---025-6861488640110-11 Q gi|254780153|r 106 MSDIRQLSLQDVREFTAPYGSLPDFSKV----D-FDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATSA-VF 175 (391) Q Consensus 106 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~-~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vSs-~g 175 (391) T Consensus 122 -~~~a~~~G~~~~~vp~~-~~~~d~~~l~~~i~~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vviDEaY~ef~ 199 (367) T PRK02731 122 -PIAAQAVGAKPVEVPAK-DYGHDLDAMLAAVTPRTKLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYV 199 (367) T ss_pred -HHHHHHCCCEEEEECCC-CCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHC T ss_conf -99999829889995476-7765968999855878868998289999886575699999998545576388411267642 Q ss_pred HCC-----CC-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCC Q ss_conf 025-----45-56857--9997001200176651--54456778887654114457783123200112321033478644 Q gi|254780153|r 176 ARH-----ID-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETI 245 (391) Q Consensus 176 ~~p-----~d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (391) T Consensus 200 ~~~~~~~~~~l~~~~~n~iv~rSfSK~~gl-aGlRlGy~ia~~~~i~~l~~~~~-------------------------p 253 (367) T PRK02731 200 ARKDYEDGIELVKEFPNVVVTRTFSKAYGL-AGLRVGYGIAPPEIIDALNRVRQ-------------------------P 253 (367) T ss_pred CCCCCCCHHHHHHHCCCEEEEEECCHHHCC-CCCCEEEEECCHHHHHHHHHHHC-------------------------C T ss_conf 576665589997623764799746666516-88705888669999999999847-------------------------6 Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCHHH Q ss_conf 6664488999999998620103189999999977999999987479716766882003653178-982473101137345 Q gi|254780153|r 246 NTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDINS 324 (391) Q Consensus 246 ~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~~~ 324 (391) T Consensus 254 ~~v~~~aq~aa~aaL~---d~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p------s~~nFil~~~~~~~-------- 315 (367) T PRK02731 254 FNVNSLALAAAVAALD---DDAFVEKSRELNAKGMARLEEFLAELG-LEYIP------SYGNFILVDFDDGK-------- 315 (367) T ss_pred CCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC------CCCEEEEEECCCCC-------- T ss_conf 6588999999999966---999999999999999999999999784-98878------98618999889999-------- Q ss_pred HHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 67888999998886282872665-5676750568615888999999999999999999 Q gi|254780153|r 325 QKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 325 ~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 316 ---~a~~~~~~L~~~gI~vr~~~~fg-l~~~~Risig---t~een~~li~al~~~l~e 366 (367) T PRK02731 316 ---DAAAIYEALLKRGVIVRPLAGYG-LPNALRITIG---TPEENRRFLAALKEFLAQ 366 (367) T ss_pred ---CHHHHHHHHHHCCEEEEECCCCC-CCCEEEEEEC---CHHHHHHHHHHHHHHHHH T ss_conf ---99999999996893898588889-9896999928---999999999999999850 |
|
| >PRK09105 putative aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.4e-09 Score=77.85 Aligned_cols=294 Identities=14% Similarity=0.144 Sum_probs=177.3 Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888 Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391) Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391) T Consensus 62 p~-v~~Ai~~~~~-~~~rYPd--~~~~~Lr~~lA~~~gv~~~-~I~~g-nGSdE~i~~l~~af~~~g~~vv~~~Ptf~~Y 135 (374) T PRK09105 62 AA-ARAAAARSAA-LSGRYLF--EMQDELRTLFAAQLGLPVD-HLHAY-AGSSEPLNYAVLAFTSPEAGLVTADPTYEAG 135 (374) T ss_pred HH-HHHHHHHHHH-HCCCCCC--CCHHHHHHHHHHHHCCCHH-HEEEE-CCHHHHHHHHHHHHHCCCCEEEECCCCHHHH T ss_conf 99-9999997652-4577989--8689999999999785902-49993-6999999999999807998689588877999 Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCCCCEEEEEEECCCCEEECCEEE--EC--CCCCCEEEEEECC-HHH Q ss_conf 88765323876306740577765786767----855657997420242022032035--02--5686148864011-011 Q gi|254780153|r 105 WMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFDRDVVFVWNGTTSGVCVPDVGF--IP--ESREGLVICDATS-AVF 175 (391) Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~v~~~h~ETstGv~~~~~~~--~~--~~~~~llivD~vS-s~g 175 (391) T Consensus 136 --~~~a~~~g~~v~~vpl~~d~~~dl~~l~~~~~~tklv~l~nPNNPTG~~~~~~el~~~~~~~~~~~lvvvDEAY~ef~ 213 (374) T PRK09105 136 --WRAADAQGAKVIKVPLRADGAHDVRAMLAADPNAGLIYICNPNNPTGSVTPRADIEWLLAHKPAGSVVLVDEAYIHFS 213 (374) T ss_pred --HHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHC T ss_conf --999998297799986165558586889735789878997889999876579999999997189881899862676625 Q ss_pred HCC--CCC-CCC-EEEEE-CCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCC Q ss_conf 025--455-685-79997-001200176651--54456778887654114457783123200112321033478644666 Q gi|254780153|r 176 ARH--IDF-NKL-DVVTF-SAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTP 248 (391) Q Consensus 176 ~~p--~d~-~~i-Dv~~a-~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP 248 (391) T Consensus 214 ~~~s~~~l~~~~~NvivlRTfSKayg-LAGlRvGY~ia~~~li~~l~~~--------------------------~~~~~ 266 (374) T PRK09105 214 DAPSVVDLVAQRKDVVVLRTFSKLYG-MAGMRLGLAAARPDLLAKLARF--------------------------GGNPL 266 (374) T ss_pred CCCCCHHHHHCCCCEEEEEHHHHHHC-CCCCCCCHHHCCHHHHHHHHHC--------------------------CCCCC T ss_conf 78643256742898899822237626-6510022310899999999735--------------------------88988 Q ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCCCCCCCCHHHHHH Q ss_conf 44889999999986201031899999999779999999874797167668820036531789-82473101137345678 Q gi|254780153|r 249 SLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDSDIASLDINSQKS 327 (391) Q Consensus 249 ~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~~~~~~~~~~~~~ 327 (391) T Consensus 267 ~~~a~aaa~aaL~---d~~~~~~~~~~~~~~R~~l~~~L~~~g-~~~~------pS~aNFil~~~~~~------------ 324 (374) T PRK09105 267 PVPAAAAGLASLR---DPKLVPQRRAQNAAVREDTIAWLRKQG-YACT------PSQANCFMVDVKRP------------ 324 (374) T ss_pred CHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEEECCCC------------ T ss_conf 7999999999962---999999999999999999999999783-9589------98785799955999------------ Q ss_pred HHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH Q ss_conf 88999998886282872665567675056861588899999999999999999 Q gi|254780153|r 328 FCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391) Q Consensus 328 ~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391) T Consensus 325 -a~~~~~~L~~~gIlV~r-~~~~~~~~lRISiG---t~een~~fl~AL~evL~ 372 (374) T PRK09105 325 -AEVFADAMAKQGVFIGR-SWPIWPNWVRVTVG---TEEEMAAFRSAFAKVMR 372 (374) T ss_pred -HHHHHHHHHHCCEEEEC-CCCCCCCEEEEECC---CHHHHHHHHHHHHHHHC T ss_conf -99999999969979937-99988997999469---99999999999999866 |
|
| >PRK06207 aspartate aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.1e-09 Score=78.12 Aligned_cols=327 Identities=13% Similarity=0.121 Sum_probs=177.3 Q ss_pred CCCC-CCCCCCCCC---CHHHHHHHHHHHCC-CCCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHH Q ss_conf 9988-868887768---96899998632103-65328---988999999999999999688998-579997487348999 Q gi|254780153|r 11 PKRP-FFSSGPCAK---RPGWSLGILEGALL-GRSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVE 81 (391) Q Consensus 11 p~~~-~F~pGP~~~---~p~~v~~~~~~~~l-~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~e 81 (391) T Consensus 38 ~~~~id~~~G~pD~~~PtP~~i-~~~~~~~~~~g~~~Yt~~~G~~eLReAia~~~~~~~g~~~d~~d~Iivt~G~~~al~ 116 (406) T PRK06207 38 PGRPVDFSHGDVDAHEPTPGSL-ELFSQGVERGGVQAYTEYRGDLEIRELVAARLAEFTGAPVDARDGLIITPGTQGALF 116 (406) T ss_pred CCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH T ss_conf 9997237889999999986999-999999973899889998672999999999999986899998786998587799999 Q ss_pred HHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEE------CCCCCCCCHHHCCC-----CCCEEEEEEECCCCE Q ss_conf 8753205789707997073688888765323876306740------57776578676785-----565799742024202 Q gi|254780153|r 82 MALWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFT------APYGSLPDFSKVDF-----DRDVVFVWNGTTSGV 150 (391) Q Consensus 82 a~~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv 150 (391) T Consensus 117 ~a~~al~~pGDeViv~~P~y~~y-~~~i~~~g~-~~vpv~l~~~~~~~~~~~~d~d~le~~i~~~tk~iil~nP~NPTG~ 194 (406) T PRK06207 117 LAVASTVTRGDKVAIVQPDYFAN-RKLVEFFEG-EIVPVQLDYVSVDETRAGLDLDQLEAAFKAGVRVFLFSNPNNPAGV 194 (406) T ss_pred HHHHHHCCCCCEEEEECCCCCCH-HHHHHHCCC-EEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCH T ss_conf 99999758998799978987457-999998298-7999856776776344689999999745448769998899798572 Q ss_pred EECCEE-----EECCCCCCEEEEEECCHHH---H--------CCCCCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHH Q ss_conf 203203-----5025686148864011011---0--------254556857999700120017665--154456778887 Q gi|254780153|r 151 CVPDVG-----FIPESREGLVICDATSAVF---A--------RHIDFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVE 212 (391) Q Consensus 151 ~~~~~~-----~~~~~~~~llivD~vSs~g---~--------~p~d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~ 212 (391) T Consensus 195 v~s~e~l~~l~~la~~~~i~visDEiY~~l~ydg~~~~~~~~~~~~~~~~-I~~~s~SK~~~-m~G~RlG~~~~~~~li~ 272 (406) T PRK06207 195 VYSPEEIAQIAALARRYGATVIADQLYSRLRYAGASYTHLRALAVDPENV-ITIMGPSKTES-LSGYRLGVAFGSPAIIA 272 (406) T ss_pred HCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCE-EEEEECHHHHH-CCCCCEEEEECCHHHHH T ss_conf 13399999999987557959999646645455898877876635776767-99751324431-22562488978999999 Q ss_pred HHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC Q ss_conf 65411445778312320011232103347864466644889999999986201031899999999779999999874797 Q gi|254780153|r 213 RLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDW 292 (391) Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~ 292 (391) T Consensus 273 ~~~~~~~~----------------------~~~~~~-~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~R~~l~~~l~~~~g 327 (406) T PRK06207 273 RMEKLQAI----------------------VSLRAA-GYCQAVLRTWFDEP--PGWMEDRIAQHQAIRDDLIRVLRGIDG 327 (406) T ss_pred HHHHHHHH----------------------HCCCCH-HHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 99999988----------------------436842-99999999999677--999999999999999999999850899 Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC--CCCCCCEEEEECCCCCCHHHHH Q ss_conf 16766882003653178982473101137345678889999988-86282872665--5676750568615888999999 Q gi|254780153|r 293 IENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS--YRDAPLGLRVWVGVTVEKEDLL 369 (391) Q Consensus 293 ~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~--~r~~~~~~RIg~~g~i~~~dv~ 369 (391) T Consensus 328 ~~~~~P~gg~----yl~~~l~~~~---~~-------~~~f~~~Ll~e~gVav~PG~~FG~~~~~~vRlsfa--~~~e~l~ 391 (406) T PRK06207 328 VFARAPEAGS----YLFPRLPKLA---VG-------LADFVKILRLQAGVVVTPGTEFSPHTADSIRLNFS--QDHAAAV 391 (406) T ss_pred CEECCCCCEE----EEEEECCCCC---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHH T ss_conf 5745899148----9968888889---99-------99999999985899998865658999897999973--9899999 Q ss_pred HHHHHHHHHHHHHH Q ss_conf 99999999999999 Q gi|254780153|r 370 LLCDWLRWVFYFQK 383 (391) Q Consensus 370 ~L~~aLe~~~~~~k 383 (391) T Consensus 392 eal~RL~~~l~~yr 405 (406) T PRK06207 392 AAVERIAALIERYR 405 (406) T ss_pred HHHHHHHHHHHHHC T ss_conf 99999999999855 |
|
| >PRK05387 histidinol-phosphate aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.5e-09 Score=77.75 Aligned_cols=302 Identities=15% Similarity=0.110 Sum_probs=178.2 Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888 Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391) Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391) T Consensus 40 p~-v~~a~~~~~~~~~~~YPd~~~--~~Lr~~iA~~~gv~~~-~I~v-g~Gs~e~i~~~~~~~~~~gd~Vl~p~Pty~~Y 114 (353) T PRK05387 40 PK-VLEAIRAALGDDLRLYPDPDA--TALRQAIAAYYGVSPE-QVFV-GNGSDEVLAHAFLAFFKHDRPLLFPDITYSFY 114 (353) T ss_pred HH-HHHHHHHHHHHHHCCCCCCCH--HHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH T ss_conf 99-999999967525247999978--9999999999786858-8998-57899999999999618998664078770369 Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCHHHCC-CCCCEEEEEEECCCCEEECCEE---EECCCCCCEEEEEECC-HHHHCC- Q ss_conf 887653238763067405777657867678-5565799742024202203203---5025686148864011-011025- Q gi|254780153|r 105 WMSDIRQLSLQDVREFTAPYGSLPDFSKVD-FDRDVVFVWNGTTSGVCVPDVG---FIPESREGLVICDATS-AVFARH- 178 (391) Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~v~~~h~ETstGv~~~~~~---~~~~~~~~llivD~vS-s~g~~p- 178 (391) T Consensus 115 --~~~a~~~g~~~~~vp~~~~~~~~~~~~~~~~~~v~l~nPnNPTG~~~~~~~l~~ll~~~~~~~vvvDEAY~ef~~~s~ 192 (353) T PRK05387 115 --PVYAGLYGIPYEEVPLDDDFSIDVEDYLRPNGGIIFPNPNAPTGIALPLADIERILAANPDSVVVIDEAYVDFGGESA 192 (353) T ss_pred --HHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHCCCCCH T ss_conf --999998095489950564345799997263676998489998788689999999997489988996053564187540 Q ss_pred CC-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHH Q ss_conf 45-56857--9997001200176651--5445677888765411445778312320011232103347864466644889 Q gi|254780153|r 179 ID-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCI 253 (391) Q Consensus 179 ~d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i 253 (391) T Consensus 193 ~~l~~~~~nlivlrTfSK~~g-laGlRlGy~ia~~~li~~l~~~~~~~----------------------~~~~v~~~a~ 249 (353) T PRK05387 193 IPLIDRYPNLLVVQTLSKSRS-LAGLRVGFAIGHPELIEALERVKNSF----------------------NSYPLDRLAQ 249 (353) T ss_pred HHHHHCCCCEEEEEECCHHHC-CCCCCCEEEECCHHHHHHHHHHHHHC----------------------CCCCCCHHHH T ss_conf 245650787787630416308-77662342106999999999998541----------------------6777669999 Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH Q ss_conf 99999998620103189999999977999999987479716766882003653178982473101137345678889999 Q gi|254780153|r 254 EDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSML 333 (391) Q Consensus 254 ~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 333 (391) T Consensus 250 ~aa~aal~---d~~~~~~~~~~~~~~R~~l~~~L~~lg-~~v~------ps~anFvl~-~~~~~----------~a~~~~ 308 (353) T PRK05387 250 AGAIAAIE---DEAYFEETCAKVIATRERLVEELEALG-FEVL------PSAANFVFA-RHPQH----------DAAALA 308 (353) T ss_pred HHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEE-ECCCC----------CHHHHH T ss_conf 99999963---859999999999999999999999689-8789------898858999-89999----------999999 Q ss_pred HHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH Q ss_conf 98886282872665567675056861588899999999999999999 Q gi|254780153|r 334 SFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391) Q Consensus 334 ~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391) T Consensus 309 ~~L~~~gI~VR~~~~~~l~~~iRisvg---t~een~~l~~al~~il~ 352 (353) T PRK05387 309 AALRERGIIVRHFNKPRIDQFLRITIG---TDEECEALVDALKEILA 352 (353) T ss_pred HHHHCCCEEEEECCCCCCCCEEEEECC---CHHHHHHHHHHHHHHHC T ss_conf 999809939997998999998999729---99999999999999974 |
|
| >PRK05764 aspartate aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.4e-09 Score=80.29 Aligned_cols=314 Identities=11% Similarity=0.025 Sum_probs=170.9 Q ss_pred HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC Q ss_conf 689999863210----3653289889999999999999996889985799974873489998753205789707997073 Q gi|254780153|r 25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES 100 (391) Q Consensus 25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~ 100 (391) T Consensus 46 p~~i~~a~~~~~~~~~~~Y~~-~~G~~~LR~aia~~~~~~~g~~v~~d~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~ 124 (389) T PRK05764 46 PEHIKEAAIAALDEGKTKYTP-AAGIPELREAIAEKLKRDNGLDYEPDQIIVTTGAKQALYNAFMALLNPGDEVIIPAPY 124 (389) T ss_pred CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCC T ss_conf 899999999998479999989-9887999999999999986899857978988887999999999958999989985786 Q ss_pred HHHHHHHHHHHCCCCCEEEEE--CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEE Q ss_conf 688888765323876306740--57776578676785-----5657997420242022032035-----02568614886 Q gi|254780153|r 101 FGLGWMSDIRQLSLQDVREFT--APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVIC 168 (391) Q Consensus 101 ~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~lliv 168 (391) T Consensus 125 Y~~y-~~~~~~~g-~~~v~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~v~s~~~l~~l~~~a~~~~i~ii~ 202 (389) T PRK05764 125 WVSY-PEMVKLAG-GKPVFVPTGEENGFKLTPEQLEAAITPKTKALILNSPSNPTGAVYSKEELEAIADVAVEHDIWVLS 202 (389) T ss_pred CHHH-HHHHHHCC-CEEEEECCCHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE T ss_conf 2458-99999649-865550436220876899999986384664999889989988675779999999998863532751 Q ss_pred EECCH---HHHCC-C-------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH Q ss_conf 40110---11025-4-------556857999700120017665--15445677888765411445778312320011232 Q gi|254780153|r 169 DATSA---VFARH-I-------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391) Q Consensus 169 D~vSs---~g~~p-~-------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391) T Consensus 203 DEiY~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-lpGlRiG~~i~~~~li~~~~~~~~---------------- 265 (389) T PRK05764 203 DEIYEKLVYDGFEFTSIASLSPELFDRTITVNGFSKAYA-MTGWRLGYAAGPKELIKAMSKLQS---------------- 265 (389) T ss_pred ECCCCCCCCCCCCCCCHHHHCCHHHCCCEEECCCCCCCC-CCCCCEEEEEECHHHHHHHHHHHH---------------- T ss_conf 013435556898888877849012114314314430247-866036999829999999999985---------------- Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC Q ss_conf 10334786446664488999999998620103189999999977999999987479716766882003653178982473 Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS 315 (391) Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391) T Consensus 266 -------~~~~~~~~~~Q~aa~~al~~~~--~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~--P~--G~~~~~~~~~~~ 332 (389) T PRK05764 266 -------QSTSNPTSIAQYAAIAALTGPQ--DAVEEMRKAFEERRDLMVDGLNEIPGLECPK--PE--GAFYVFPNVSKG 332 (389) T ss_pred -------HCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCEECC--CC--CCEEEEEECCCC T ss_conf -------4147898699999999985978--7899999999999999999998489988647--88--107995888888 Q ss_pred CCCCCCHHHHHHHHHHHHHH-HHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 10113734567888999998-886282872665567675056861588899999999999999999999 Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSF-LEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391) Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391) T Consensus 333 ~~------~----~~~~~~~ll~~~gV~~~PG~~Fg~~g~~Rl~fa--~~~e~l~ea~~RL~~~l~~lk 389 (389) T PRK05764 333 IT------D----SEDFAEALLEEAGVAVVPGIAFGAPGYVRLSYA--TSLEDIEEALERIERFLKSLK 389 (389) T ss_pred CC------C----HHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHCC T ss_conf 99------9----999999999819999980732489984999983--889999999999999999758 |
|
| >PRK07505 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2e-09 Score=79.27 Aligned_cols=307 Identities=15% Similarity=0.129 Sum_probs=170.4 Q ss_pred CCCCCCHHHHHHHHHHHCC------CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---- Q ss_conf 8776896899998632103------653289889999999999999996889985799974873489998753205---- Q gi|254780153|r 19 GPCAKRPGWSLGILEGALL------GRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---- 88 (391) Q Consensus 19 GP~~~~p~~v~~~~~~~~l------~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---- 88 (391) T Consensus 61 GL~~-hp~-v~~aa~~a~~~yG~g~~~s~~~~g~~~~h~~LE~~LA~~~g~-e---al~f-~sg~~An~g~i~~Lasg~~ 133 (405) T PRK07505 61 GLDN-HPA-IIDGAVDALRRTGVLDLSSSRTRVQSQILKDLEESLSELFGA-S---VLTF-TSCSAAHLGILPLLASGHL 133 (405) T ss_pred CCCC-CHH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-C---EEEE-CCHHHHHHHHHHHHHHCCC T ss_conf 8889-999-999999999986889876486414839999999999987398-7---7987-3268999999999972222 Q ss_pred --CCCCEEEEE-ECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC-CCCCCEEEEEEECCC--CEEECCEEE--ECC Q ss_conf --789707997-073688888765323876306740577765786767-855657997420242--022032035--025 Q gi|254780153|r 89 --GYRGVDVLA-WESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKV-DFDRDVVFVWNGTTS--GVCVPDVGF--IPE 160 (391) Q Consensus 89 --~~~~~~~~~-~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~v~~~h~ETst--Gv~~~~~~~--~~~ 160 (391) T Consensus 134 ~~~~~~~ii~D~~~HaSl~~~~g~-~~s~--a~~~~f~HnD~~~Le~~~~~~~~~~iV-~EgVfSMGdiApL~~l~~L~~ 209 (405) T PRK07505 134 TGGKPPHMVFDKYAHASLAILKGI-CADE--TEVETIDHNDLDALEDICKTNKRVAYV-ADGVYSMGGIAPVKELVDLQD 209 (405) T ss_pred CCCCCCEEEEECCCCCCHHHHHHH-HCCC--CCEEEECCCCHHHHHHHHHHCCCCEEE-EEEEECCCCHHHHHHHHHHHH T ss_conf 489987899987643784556677-5489--968986799999999987456994899-984255898345999999987 Q ss_pred CCCCEEEEEECCHHHHC----------CC--CCCCCEEEEECCHHCCCCCCCCEEEE-ECHHHHHHHHHCCCCCCCCCHH Q ss_conf 68614886401101102----------54--55685799970012001766515445-6778887654114457783123 Q gi|254780153|r 161 SREGLVICDATSAVFAR----------HI--DFNKLDVVTFSAQKVLGGEAGFGIII-LSPASVERLEKYVPSWPLPKIF 227 (391) Q Consensus 161 ~~~~llivD~vSs~g~~----------p~--d~~~iDv~~a~sQK~l~~ppGl~~v~-~s~~al~~~~~~~~~~~~~~~~ 227 (391) T Consensus 210 ~y~a~L~vDEAH~~Gv~G~~GrG~~~~~~~~~~~~~~i~~gTlsKA~Gs~GG--~V~~g~~~~~~~l~~~--a------- 278 (405) T PRK07505 210 KYGLFVYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIATSLGKAFGASGG--VIMLGYAEQIRLILRY--A------- 278 (405) T ss_pred HCCEEEEEECCCEECCCCCCCCCCHHHHHCCCCCCEEEEEEECCCHHCCCCE--EEEECCHHHHHHHHHH--C------- T ss_conf 5676999965210012059997231687578888417998003210015615--9997859999999971--8------- Q ss_pred HCCHHHHHHCCCCCCCCCCC--CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC Q ss_conf 20011232103347864466--6448899999999862010318999999997799999998747971676688200365 Q gi|254780153|r 228 RMVKGGRVMEGLFCGETINT--PSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSN 305 (391) Q Consensus 228 ~~~~~~~~~~~~~~~~~~~T--P~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~ 305 (391) T Consensus 279 --------------r~~ifStal~p~~~aa~~as~~i~~~~-e~~~~~~~L~~ni~~~~~~l~~----~~----~~s~~p 335 (405) T PRK07505 279 --------------GPYAFSQPLNVAALGAISASAEIHLSS-ELDQLQQKLHNNIALFDSLIPT----EQ----SGSFLP 335 (405) T ss_pred --------------CCHHCCCCCCHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHCCC----CC----CCCCCC T ss_conf --------------411136644799999999999998575-4799999999999999974587----77----899998 Q ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCE---EEEECCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 3178982473101137345678889999988862828726655676750---5686158889999999999999999999 Q gi|254780153|r 306 TSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLG---LRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391) Q Consensus 306 ~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~---~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391) T Consensus 336 -I~~v~ig~~~-----------~a~~~~~~L~e~Gi~v~~i~~PtVp~g~~rlRi~l~A~hT~edId~l~~~L~~v~~e~ 403 (405) T PRK07505 336 -IRLIYIGDED-----------TAIKYAKQLKDAGFYTSPVFFPVVAKGNAGLRIMFRADHTNEEIKRLCSLLKEILADY 403 (405) T ss_pred -EEEEEECCHH-----------HHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH T ss_conf -7999949999-----------9999999999789018756388389798249987488899999999999999999985 |
|
| >PRK03566 consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=4e-09 Score=77.40 Aligned_cols=295 Identities=18% Similarity=0.162 Sum_probs=174.8 Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888 Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391) Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391) T Consensus 47 ~~~v~~a~~~~~~~-~~~YPd~~~--~~Lr~aiA~~~gv~~~-~I~v-~~Gs~e~i~l~~~a~~~pGd~Vl~~~P~y~~Y 121 (365) T PRK03566 47 SPKALEAIRAALSE-LHRYPDGNG--FELKAALAEKLGVPPE-QITL-GNGSNDLLELLARAFLGPGDEIIYSQYAFAVY 121 (365) T ss_pred CHHHHHHHHHHHHH-CCCCCCCCH--HHHHHHHHHHHCCCHH-HEEE-CCCHHHHHHHHHHHHCCCCCEEEECCCCHHHH T ss_conf 99999999998886-166959668--9999999999784866-7998-77899999999998558998767668866899 Q ss_pred HHHHHHHCCCCCEEEEE-CCCCCCCCHHHC-----CCCCCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEECCH- Q ss_conf 88765323876306740-577765786767-----855657997420242022032035---025-6861488640110- Q gi|254780153|r 105 WMSDIRQLSLQDVREFT-APYGSLPDFSKV-----DFDRDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDATSA- 173 (391) Q Consensus 105 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~-----~~~~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~vSs- 173 (391) T Consensus 122 --~~~~~~~g~~~~~vp~~~~--~~dl~~l~~~i~~~~klv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vV~DEaY~e 197 (365) T PRK03566 122 --PLATQAVGARAVEVPAKDY--GHDLEAMLAAITPKTRLVFIANPNNPTGTFLSAAELEAFLAKVPPDVLVVLDEAYTE 197 (365) T ss_pred --HHHHHHCCCEEEEECCCCC--CCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHH T ss_conf --9999981974899617676--769588998638888689977999988773570658999975456744985245777 Q ss_pred HHHCC-----CC-CCCCE--EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCC Q ss_conf 11025-----45-56857--999700120017665--1544567788876541144577831232001123210334786 Q gi|254780153|r 174 VFARH-----ID-FNKLD--VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGE 243 (391) Q Consensus 174 ~g~~p-----~d-~~~iD--v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (391) T Consensus 198 f~~~~~~~~~~~~~~~~~n~iv~rSfSK~~gl-aGlRiGy~ia~~~li~~l~~~~~------------------------ 252 (365) T PRK03566 198 YAAPEERPDSLAWLKKYPNLVVSRTFSKAYGL-AGLRVGYAVSNPEIADLLNRVRQ------------------------ 252 (365) T ss_pred HCCCCCCCCHHHHHHHCCCEEEEEECCHHCCC-CCHHHEEEECCHHHHHHHHHHCC------------------------ T ss_conf 50477777788876413772598545452057-57301410169999999999618------------------------ Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCH Q ss_conf 446664488999999998620103189999999977999999987479716766882003653178-9824731011373 Q gi|254780153|r 244 TINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-MKIVDSDIASLDI 322 (391) Q Consensus 244 ~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~~~~d~~~~~~~~ 322 (391) T Consensus 253 -p~~vn~~aq~aa~aaL~---~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p------s~~nF~l~~~~~~------- 314 (365) T PRK03566 253 -PFNVNSLALAAAVAALD---DDDFLAKSRELNRAGMQQLEAGFDALG-LEYIP------SKGNFVTVDVGRD------- 314 (365) T ss_pred -CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC------CCCEEEEEECCCC------- T ss_conf -88977999999999958---999999999999989999999999787-98878------9980899978999------- Q ss_pred HHHHHHHHHHHHHHHHCCEEECCCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 4567888999998886282872665-5676750568615888999999999999999999 Q gi|254780153|r 323 NSQKSFCKSMLSFLEKEEIAYDIGS-YRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 323 ~~~~~~~~~~~~~l~~~g~~~~~~~-~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 315 ------~~~l~~~L~~~gV~Vrp~~~fg-l~~~lRis~g---~~een~~l~~aL~~il~e 364 (365) T PRK03566 315 ------AAAIYQALLRQGVIVRPVAGYG-MPNHLRVSIG---LPEENARFLAALKKVLAE 364 (365) T ss_pred ------HHHHHHHHHHCCEEEEECCCCC-CCCEEEEEEC---CHHHHHHHHHHHHHHHCC T ss_conf ------9999999997791898689899-9897999958---999999999999998766 |
|
| >PRK08153 histidinol-phosphate aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.4e-09 Score=77.87 Aligned_cols=313 Identities=15% Similarity=0.093 Sum_probs=182.6 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC Q ss_conf 88868887768968999986321036532898899999999999999968899857999748734899987532057897 Q gi|254780153|r 13 RPFFSSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG 92 (391) Q Consensus 13 ~~~F~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~ 92 (391) T Consensus 37 kL~sNENP~gpsp~-v~~Ai~~~~~~-~~rYPd~--~~~~Lr~~lA~~~gv~~e-~I~~-gnGSdeli~~~~~a~~~~g~ 110 (370) T PRK08153 37 RIGANESGFGPSPS-VIAAMREAAAE-VWKYGDP--ENHDLRHALAAHHGVAPE-NIMV-GEGIDGLLGLIVRLYVEPGD 110 (370) T ss_pred EECCCCCCCCCCHH-HHHHHHHHHHH-CCCCCCC--CHHHHHHHHHHHHCCCHH-HEEE-ECCHHHHHHHHHHHHHCCCC T ss_conf 86899999898999-99999976864-5679997--789999999998687866-7998-08889999999999855999 Q ss_pred EEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH----C-C-CCCCEEEEEEECCCCEEECCEEE--EC-C-CC Q ss_conf 0799707368888876532387630674057776578676----7-8-55657997420242022032035--02-5-68 Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSK----V-D-FDRDVVFVWNGTTSGVCVPDVGF--IP-E-SR 162 (391) Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~-~-~~~~v~~~h~ETstGv~~~~~~~--~~-~-~~ 162 (391) T Consensus 111 ~vv~~~p~y~~y~~-~~~~~g~~~~~vp~~~~~~--d~~~~l~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~l~~~~~~ 187 (370) T PRK08153 111 AVVTSLGAYPTFNY-HVAGFGGRLVTVPYRDDHE--DLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPE 187 (370) T ss_pred CCCCCCCCCCHHHH-HHHHHCCEEEEEECCCCCC--CHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCC T ss_conf 23437887516999-9998196699994456544--86999986037897389976895985776786889999984777 Q ss_pred CCEEEEEECCH-HHHC----CCCCCCCEEE-EECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHH Q ss_conf 61488640110-1102----5455685799-97001200176651--544567788876541144577831232001123 Q gi|254780153|r 163 EGLVICDATSA-VFAR----HIDFNKLDVV-TFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGR 234 (391) Q Consensus 163 ~~llivD~vSs-~g~~----p~d~~~iDv~-~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~ 234 (391) T Consensus 188 ~~lvVvDEAY~ef~~~~~~~~l~~~~~NliVlRTfSK~yg-LAGlRlGY~ia~~~li~~l~k~r~--------------- 251 (370) T PRK08153 188 TTLLVLDEAYCETAPASAAPPIDPDDPNVIRMRTFSKAYG-LAGARVGYAIGTPGTIKAFDKVRN--------------- 251 (370) T ss_pred CCEEEEEHHHHHHCCCCCHHHHHHCCCCEEEEEECCHHCC-CCCCCCCCCCCCHHHHHHHHHHCC--------------- T ss_conf 7389621535643564217788743998899982622037-888743201389999999998648--------------- Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE-EC Q ss_conf 21033478644666448899999999862010318999999997799999998747971676688200365317898-24 Q gi|254780153|r 235 VMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMK-IV 313 (391) Q Consensus 235 ~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~-~~ 313 (391) T Consensus 252 ----------p~~vn~~aq~aa~aaL~---d~~~~~~~~~~i~~~R~~l~~~l~~~g-~~~~------pS~aNFil~~~~ 311 (370) T PRK08153 252 ----------HFGMNRIAQAAALAALK---DQAYLAEVVAKIAAARDRIAAIARANG-LTPL------PSATNFVAIDCG 311 (370) T ss_pred ----------CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEC------CCCCCEEEEECC T ss_conf ----------98877999999999977---999999999999999999999998685-8479------997877999848 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 7310113734567888999998886282872665567675056861588899999999999999999999 Q gi|254780153|r 314 DSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391) Q Consensus 314 d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391) T Consensus 312 ~----------~~~~a~~l~~~L~~~GIlVR~~~~~~l~~~lRIsiG---t~een~~~l~aL~eiLk~~~ 368 (370) T PRK08153 312 R----------DGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSVG---PEEELDLFAEALPEALKAAR 368 (370) T ss_pred C----------CHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECC---CHHHHHHHHHHHHHHHHHHH T ss_conf 9----------746999999999978919944998889998999739---99999999999999999863 |
|
| >PRK05957 aspartate aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2e-08 Score=72.98 Aligned_cols=329 Identities=14% Similarity=0.044 Sum_probs=177.0 Q ss_pred CCCCCCCCCC-CCCCCHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHH Q ss_conf 8998886888-7768968999986321036-5328---988999999999999999688998-57999748734899987 Q gi|254780153|r 10 KPKRPFFSSG-PCAKRPGWSLGILEGALLG-RSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMA 83 (391) Q Consensus 10 ~p~~~~F~pG-P~~~~p~~v~~~~~~~~l~-~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~ 83 (391) T Consensus 26 ~~~iI~l~~G~pd~~~p~~v~~a~~~al~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~vt~Ga~~al~~~ 105 (389) T PRK05957 26 NPGTISLGQGVVSYPPPPEAIEALNNFLANPENHLYQSVQGIPPLLEAITQKLQADNGIEINNENAIVVTAGSNMAFMNA 105 (389) T ss_pred CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH T ss_conf 99938899989999988999999999982867886899757499999999999999689989898899887889999999 Q ss_pred HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEE-- Q ss_conf 5320578970799707368888876532387630674057776578676785-----565799742024202203203-- Q gi|254780153|r 84 LWSLLGYRGVDVLAWESFGLGWMSDIRQLSLQDVREFTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVG-- 156 (391) Q Consensus 84 ~~nl~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~-- 156 (391) T Consensus 106 ~~al~~pGD~Vlv~~P~Y~~~-~~~~~~~g-~~~v~vp~d~~~~~~~~~l~~~i~~~~k~iil~~P~NPTG~v~s~~~l~ 183 (389) T PRK05957 106 ILAITDPGDEIILNTPYYFNH-EMAITMAG-CQPVLVPTDENYQLRPEAIEAAITPKTRAIVTISPNNPTGVVYPEALLR 183 (389) T ss_pred HHHHCCCCCEEEECCCCCCCH-HHHHHHCC-CCEEEEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHH T ss_conf 999759999899778877668-99999749-9358865799889799999984510262786189989989887677899 Q ss_pred ---EECCCCCCEEEEEECCHHH---HCC-C------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCC Q ss_conf ---5025686148864011011---025-4------556857999700120017665--154456778887654114457 Q gi|254780153|r 157 ---FIPESREGLVICDATSAVF---ARH-I------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSW 221 (391) Q Consensus 157 ---~~~~~~~~llivD~vSs~g---~~p-~------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~ 221 (391) T Consensus 184 ~l~~la~~~~~~ii~DE~Y~~l~~~~~~~~s~~~~~~~~~~vI~i~S~SK~~~-~~G~RvG~~v~~~~l~~~~~~~~--- 259 (389) T PRK05957 184 AVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYG-FASWRIGYMVIPIHLLEAIKKIQ--- 259 (389) T ss_pred HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC-CCCCCEEEEEECHHHHHHHHHHH--- T ss_conf 99987606781899898432134588666776544563454301344431244-65643488983899999999998--- Q ss_pred CCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 78312320011232103347864466644889999999986201031899999999779999999874797167668820 Q gi|254780153|r 222 PLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDET 301 (391) Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~ 301 (391) T Consensus 260 --------------------~~~~~~~~~~~Q~aa~~al~~~--~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~-p~ 316 (389) T PRK05957 260 --------------------DTILICPPVVSQYAALGALQVG--KSYCQQHLPEIAQVRQILLKSLAQLQDWCFLHP-AN 316 (389) T ss_pred --------------------HHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC-CC T ss_conf --------------------5456785399999999999779--999999999999999999999985689726607-98 Q ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH-HHCCEEECCCC-CCCCCC-EEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 03653178982473101137345678889999988-86282872665-567675-0568615888999999999999999 Q gi|254780153|r 302 TRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFL-EKEEIAYDIGS-YRDAPL-GLRVWVGVTVEKEDLLLLCDWLRWV 378 (391) Q Consensus 302 ~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~-~r~~~~-~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391) T Consensus 317 --G~f~~~~~~~~-~---~~-------~~~~~~~ll~e~gV~v~PG~~Fg~~~~~~~Rlsf-~~~~~e~l~eg~~RL~~a 382 (389) T PRK05957 317 --GAFYCFLKVNT-D---LN-------DFELVKQLIRDYRVAVIPGSTFGMKNGCYLRIAY-GALQKATAKEGIERLVQG 382 (389) T ss_pred --EEEEEEEECCC-C---CC-------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEE-CCCCHHHHHHHHHHHHHH T ss_conf --57999897898-9---69-------9999999999799999787310889999899985-429999999999999999 Q ss_pred HHH Q ss_conf 999 Q gi|254780153|r 379 FYF 381 (391) Q Consensus 379 ~~~ 381 (391) T Consensus 383 lk~ 385 (389) T PRK05957 383 LKT 385 (389) T ss_pred HHH T ss_conf 999 |
|
| >PRK01533 histidinol-phosphate aminotransferase; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=5e-09 Score=76.75 Aligned_cols=295 Identities=18% Similarity=0.124 Sum_probs=177.8 Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCHHHH Q ss_conf 68999986321036532898899999999999999968899857999748734899987532057897079970736888 Q gi|254780153|r 25 PGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESFGLG 104 (391) Q Consensus 25 p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~~~r 104 (391) T Consensus 45 ~~-v~~al~~~~~~-~~~YPd--~~~~~Lr~~iA~~~gv~~e-~I~-vgnGs~E~i~~~~~a~~~~gd~vl~~~Ptf~~Y 118 (366) T PRK01533 45 PR-VLDELQKSWLD-HALYPD--GGATTLRQTIANKLHVKME-QVL-CGSGLDEVIQIISRAVLKAGDNIVTAGATFPQY 118 (366) T ss_pred HH-HHHHHHHHHHH-CCCCCC--CCHHHHHHHHHHHHCCCHH-HEE-ECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHH T ss_conf 99-99999987874-557969--7789999999998682821-299-817899999999999947998236589886457 Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCHHHC----CCC-CCEEEEEEECCCCEEECCEEE---ECC-CCCCEEEEEEC-CHH Q ss_conf 88765323876306740577765786767----855-657997420242022032035---025-68614886401-101 Q gi|254780153|r 105 WMSDIRQLSLQDVREFTAPYGSLPDFSKV----DFD-RDVVFVWNGTTSGVCVPDVGF---IPE-SREGLVICDAT-SAV 174 (391) Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~-~~v~~~h~ETstGv~~~~~~~---~~~-~~~~llivD~v-Ss~ 174 (391) T Consensus 119 --~~~a~~~g~~~~~v~l~~~-~~d~~~i~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~ll~~~~~~~~vviDEAY~ef 195 (366) T PRK01533 119 --RHHAIIEGCEVKEVALNNG-VYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEY 195 (366) T ss_pred --HHHHHHCCCEEEEEECCCC-CCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHH T ss_conf --9999980864899836778-6699999975065987899779999976746706589998627877378612878976 Q ss_pred HHC-C----CC-CCCCE--EEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCC Q ss_conf 102-5----45-56857--9997001200176651--5445677888765411445778312320011232103347864 Q gi|254780153|r 175 FAR-H----ID-FNKLD--VVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGET 244 (391) Q Consensus 175 g~~-p----~d-~~~iD--v~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (391) T Consensus 196 ~~~~~~~~~~~l~~~~~NliVlrTfSK~~g-laGlRiGy~ia~~~ii~~l~~~~~------------------------- 249 (366) T PRK01533 196 VTAKDFPETLPLLEKHKNILVLRTFSKAYG-LASFRVGYAVGHEELIEKLNVVRL------------------------- 249 (366) T ss_pred HCCCCCCHHHHHHHCCCCEEEEECCCHHCC-CCCHHHHHHHCCHHHHHHHHHHCC------------------------- T ss_conf 425787105778761898489972743236-830345366289999999998558------------------------- Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHH Q ss_conf 46664488999999998620103189999999977999999987479716766882003653178982473101137345 Q gi|254780153|r 245 INTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINS 324 (391) Q Consensus 245 ~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~ 324 (391) T Consensus 250 p~~vn~la~~aa~aaL~---d~~~~~~~~~~~~e~~~~~~~~l~~~-g~~v~------pS~aNFilv-~~~~-------- 310 (366) T PRK01533 250 PFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY------QSQTNFIFL-PVEN-------- 310 (366) T ss_pred CCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC------CCCCCEEEE-ECCC-------- T ss_conf 98843999999999967---99999999999999999999999878-68589------997877998-6699-------- Q ss_pred HHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH Q ss_conf 6788899999888628287266556767505686158889999999999999999999998 Q gi|254780153|r 325 QKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKIS 385 (391) Q Consensus 325 ~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~~ 385 (391) T Consensus 311 ----~~~l~~~L~~~GIlV-----R~~~~~iRIsvg---t~eeN~~ll~aLke~~e~~~~~ 359 (366) T PRK01533 311 ----GGEIYEACAHAGFII-----RPFPNGVRITVG---TREQNEGVISVLQQHFENKKRK 359 (366) T ss_pred ----HHHHHHHHHHCCEEE-----EECCCCEEEECC---CHHHHHHHHHHHHHHHHHCCCC T ss_conf ----999999999689899-----899598788279---9999999999999999855632 |
|
| >PRK06507 consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.6e-08 Score=73.54 Aligned_cols=331 Identities=10% Similarity=0.001 Sum_probs=176.5 Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHCCCCCCC-CH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCC Q ss_conf 8868887768-9689999863210365328-98--899999999999999968899857999748734899987532057 Q gi|254780153|r 14 PFFSSGPCAK-RPGWSLGILEGALLGRSHR-CV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLG 89 (391) Q Consensus 14 ~~F~pGP~~~-~p~~v~~~~~~~~l~~sHR-s~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~ 89 (391) T Consensus 34 i~L~iG~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~I~vt~G~~~al~~~~~~l~~ 113 (400) T PRK06507 34 VSLSSGEPDFPTPAHAIEAAHAAALAGDTKYPPMDGTPALKAAIQRKFKRENNLDYDPSEIVVSNGGKQVIFNAMMATCN 113 (400) T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCC T ss_conf 77789388998889999999999745899879987849999999999999848999824389817829999999999669 Q ss_pred CCCEEEEEECCHHHHHHHHHHHCCCCCEEEE--ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE----- Q ss_conf 8970799707368888876532387630674--057776578676785-----5657997420242022032035----- Q gi|254780153|r 90 YRGVDVLAWESFGLGWMSDIRQLSLQDVREF--TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF----- 157 (391) Q Consensus 90 ~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~----- 157 (391) T Consensus 114 pGD~Vli~~P~y~~y-~~~~~~~g~-~~v~v~l~~~~g~~~d~~~le~~~~~~tk~iil~~P~NPTG~v~s~~~l~~i~~ 191 (400) T PRK06507 114 PGDEVVIPAPSWVSY-ADIVKLAGG-VPVAVPCREETGFKLRPEDLEAAITPRTKWLFLNFPNNPTGAACTRAEMAAIAE 191 (400) T ss_pred CCCEEEECCCCCCHH-HHHHHHCCC-EEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH T ss_conf 999899905877405-799998199-159975670117641699999746756649997499293128864779999998 Q ss_pred ECCCC-CCEEEEEECCHH---HHCC-C-------CCCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCC Q ss_conf 02568-614886401101---1025-4-------556857999700120017665--15445677888765411445778 Q gi|254780153|r 158 IPESR-EGLVICDATSAV---FARH-I-------DFNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPL 223 (391) Q Consensus 158 ~~~~~-~~llivD~vSs~---g~~p-~-------d~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~ 223 (391) T Consensus 192 ~a~~~~~v~visDEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~SK~~~-~~G~RiG~~~~~~~~i~~~~~~~----- 265 (400) T PRK06507 192 VMLRHPHVWIMTDDIYEHLVYDGFEFCTIAEVEPRLYDRVLTMNGVSKAYA-MTGWRLGFCGGPKELIKAMSNVN----- 265 (400) T ss_pred HHHHCCCCEECCCCCHHHHEECCCCCCCHHHHCCCCCCCEEEEECCCCCCC-CCCCCEEEEECCHHHHHHHHHHH----- T ss_conf 665316821405664244120897788788858564553589833544446-76510487748799999999998----- Q ss_pred CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 31232001123210334786446664488999999998620103189999999977999999987479716766882003 Q gi|254780153|r 224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR 303 (391) Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r 303 (391) T Consensus 266 ------------------~~~~~~~~~~~Q~aa~~al~~~~--~~~~~~~~~~~~rrd~l~~~L~~~~g~~~~~P~G~f- 324 (400) T PRK06507 266 ------------------GQATGGIATLAQAAAAAALDGPQ--DLLKERAAIYRERRDFVVEKLAEIPGLTCHKPEGAF- 324 (400) T ss_pred ------------------HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE- T ss_conf ------------------65247654399999999984977--777899999999999999999847899567898147- Q ss_pred CCCEEEEEECCCCCCC----CCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 6531789824731011----373456788899999888628287266556767505686158889999999999999999 Q gi|254780153|r 304 SNTSICMKIVDSDIAS----LDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391) Q Consensus 304 S~~~v~~~~~d~~~~~----~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391) T Consensus 325 ---y~~~~~~~~~~~~~~~~~~~~~d~~f---~~~Ll~e~gV~v~PG~~FG~~~~vRis~a--~~~~~l~eal~Rl~~f~ 396 (400) T PRK06507 325 ---YIYPNIAGLIGKTSKGGRRLETDEDF---VMALLEEQHVATVQGAAYGMSPYFRLSYA--TDMESLGEGCARIAQFC 396 (400) T ss_pred ---EEEEECCCCCCCCCCCCCCCCCHHHH---HHHHHHHCCEEEECCCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHH T ss_conf ---99775401023345345667888999---99999858999977874489983999964--99999999999999999 Q ss_pred HH Q ss_conf 99 Q gi|254780153|r 380 YF 381 (391) Q Consensus 380 ~~ 381 (391) T Consensus 397 ~~ 398 (400) T PRK06507 397 ED 398 (400) T ss_pred HH T ss_conf 96 |
|
| >PRK08362 consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.5e-08 Score=73.72 Aligned_cols=317 Identities=15% Similarity=0.132 Sum_probs=176.6 Q ss_pred HHHHHHHHHHHCC-CCCCCCH--HHHHHHHHHHHHHHHHHCCCCC--CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC Q ss_conf 6899998632103-6532898--8999999999999999688998--579997487348999875320578970799707 Q gi|254780153|r 25 PGWSLGILEGALL-GRSHRCV--LGKERINKAIQLTRKVLEVPEN--YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99 (391) Q Consensus 25 p~~v~~~~~~~~l-~~sHRs~--~f~~i~~~~~~~l~~l~~~p~~--y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g 99 (391) T Consensus 41 p~~i~~a~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~p~~~i~i-t~G~~~al~~~~~~l~~pGD~Vlv~~P 119 (389) T PRK08362 41 PQHIKEYAKEALDKGLTHYGPNIGLPELREAIAEKLKKQNGIEADPKKEIMV-LVGANQAFLMGLATFLKDGEEVLIPSP 119 (389) T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE-CCCHHHHHHHHHHHHCCCCCEEEEECC T ss_conf 8999999999985587688998570999999999998840999997643998-188699999999997589998998158 Q ss_pred CHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEE Q ss_conf 368888876532387630674-057776578676785-----5657997420242022032035-----02568614886 Q gi|254780153|r 100 SFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVIC 168 (391) Q Consensus 100 ~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~lliv 168 (391) T Consensus 120 ~Y~~y-~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~i~~~~k~iil~~P~NPtG~v~s~~~l~~i~~~a~~~~~~ii~ 198 (389) T PRK08362 120 MFVSY-APAVILAGGKPVEVPTYEENEFRLNVDDLKKYVTEKTRALIINSPNNPTGSVLTKKDLEEIADFAVEHDLMVIS 198 (389) T ss_pred CCCCH-HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE T ss_conf 65426-89999749989998545777887699999974544682999848989847463199999999998754957981 Q ss_pred EECCHHH---H-CCCC---CCC---CEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH Q ss_conf 4011011---0-2545---568---579997001200176651--54456778887654114457783123200112321 Q gi|254780153|r 169 DATSAVF---A-RHID---FNK---LDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391) Q Consensus 169 D~vSs~g---~-~p~d---~~~---iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391) T Consensus 199 DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-l~G~RiG~~i~~~~~i~~~~~~~---------------~-- 260 (389) T PRK08362 199 DEVYEHFIYDGVKHYSIASLDGMFERTITVNGFSKTFA-MTGWRLGFVAAPSWVIEKMVKFQ---------------M-- 260 (389) T ss_pred CCCHHHHCCCCCCCCCHHHCCCCCCCEEEECCCHHHCC-CCCCCEEEEECCHHHHHHHHHHH---------------H-- T ss_conf 46456410189777686660454452023033101016-87653699980899999999999---------------8-- Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789824731 Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSD 316 (391) Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~ 316 (391) T Consensus 261 ------~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~--P~--g~~~~w~~~~~~~ 329 (389) T PRK08362 261 ------YNATCPVTFIQYAAAKALRDERSWKAVEEMRKEYDRRRNLVWKRLNEMG-LPTVK--PK--GAFYIFPRIRDTG 329 (389) T ss_pred ------HCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEC--CC--EEEEEEEECCCCC T ss_conf ------6047886599999999985970479999987889999999999888759-95557--88--2589947888889 Q ss_pred CCCCCHHHHHHHHHHHHHH-HHHCCEEECCCC-CCCCCCE-EEEECCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 0113734567888999998-886282872665-5676750-568615888999999999999999999999 Q gi|254780153|r 317 IASLDINSQKSFCKSMLSF-LEKEEIAYDIGS-YRDAPLG-LRVWVGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391) Q Consensus 317 ~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~-~r~~~~~-~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391) T Consensus 330 ~~----------~~~~~~~ll~e~gV~~~PG~~Fg~~~~~~~Rl~~a--~~~e~l~ea~~RL~~~l~e~k~ 388 (389) T PRK08362 330 LT----------SKEFSELMLKEAKVAVVPGSAFGKAGEGYIRISYA--TAYEKLEEAMDRMEKVLKEKKL 388 (389) T ss_pred CC----------HHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHCCC T ss_conf 89----------99999999982999998673338899897999971--9999999999999999985569 |
|
| >PRK07678 aminotransferase; Validated | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.9e-09 Score=74.89 Aligned_cols=332 Identities=12% Similarity=0.028 Sum_probs=172.7 Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CCCC-EE Q ss_conf 968999986321036532898899-99999999999996889985799974873489998753205-------7897-07 Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GYRG-VD 94 (391) Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~~~-~~ 94 (391) T Consensus 65 ~p~-i~~Ai~~q~~~l~~~~~~~~~~~~~~lae~L~~~~--p~~~~v-ff~~SGsEAvE~AiKlAr~y~~~~g~~~r~~i 140 (451) T PRK07678 65 RKE-LAEAAYEQLQTLSYFPLSQSHEPAIKLAEKLNEWL--GGEYVI-FFSNSGSEANETAFKIARQYHAQKGEPHRYKF 140 (451) T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCEE-EECCCHHHHHHHHHHHHHHHHHHCCCCCCEEE T ss_conf 699-99999999975888677534689999999999757--976189-95397389999999999999986099974243 Q ss_pred EEEECCHHHHHHHHHHHCCC-----------CCEEEEE------CCCCCCCCH------HHC------CCCCCEEEEEEE Q ss_conf 99707368888876532387-----------6306740------577765786------767------855657997420 Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLSL-----------QDVREFT------APYGSLPDF------SKV------DFDRDVVFVWNG 145 (391) Q Consensus 95 ~~~~g~~~~r~~~~~~~~~~-----------~~~~~~~------~~~g~~~~~------~~~------~~~~~v~~~h~E 145 (391) T Consensus 141 i~~~~~yHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAaii~E 220 (451) T PRK07678 141 ISRYRGYHGNTMGALAATGQAQRKYKYEPLAPGFLHVAPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAFIME 220 (451) T ss_pred CCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE T ss_conf 46267403897234511574310578888888815738984235776665226679999999999875078867999997 Q ss_pred CC---CCEEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHH Q ss_conf 24---2022032------0350256861488640110-110--254--5568579997001200176-651544567788 Q gi|254780153|r 146 TT---SGVCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPAS 210 (391) Q Consensus 146 Ts---tGv~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~a 210 (391) T Consensus 221 Pi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~l~gG~~Plsav~~~~ei 300 (451) T PRK07678 221 PIITGGGILMPPQDYMKAVHEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEI 300 (451) T ss_pred ECCCCCCCCCCCHHHHHHHHHHEEECCCEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCEEEEECHHH T ss_conf 53777882318879867787741245955773224027874566500110595277200133445777761677762989 Q ss_pred HHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC Q ss_conf 87654114457783123200112321033478644666448899999999862010318999999997799999998747 Q gi|254780153|r 211 VERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQEN 290 (391) Q Consensus 211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~ 290 (391) T Consensus 301 ~~~~~~---~~~~~~-------------~~h~~T~~gnpl-a~aaa~a~L~~l~~~-~l---~~~~~~~g~~l~~~L~~~ 359 (451) T PRK07678 301 YEAFKG---KGEYEF-------------FRHINTFGGNPA-ACALALKNLEIMENE-NL---IERSAQLGSLLLEQLKEE 359 (451) T ss_pred HHHHCC---CCCCCC-------------CCCCCCCCCCHH-HHHHHHHHHHHHHCC-CH---HHHHHHHHHHHHHHHHHH T ss_conf 976357---887666-------------434788987989-999999999998415-09---999999999999999999 Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC--CCCEEEEECCCCCCHHHH Q ss_conf 971676688200365317898247310113734567888999998886282872665567--675056861588899999 Q gi|254780153|r 291 DWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRD--APLGLRVWVGVTVEKEDL 368 (391) Q Consensus 291 ~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~--~~~~~RIg~~g~i~~~dv 368 (391) T Consensus 360 ~~~~p~i~dVRG~GLm~gielv~d~~~~~p---~~~~~~~~i~~~~~~~Glli~~~g~~~~~~~n~lr~~PPL~it~~ei 436 (451) T PRK07678 360 LGEHPLVGDIRGKGLLVGIELVNDKETKEP---ADNDKVASVVNACKEKGLIIGKNGMTVAGYNNVLTLAPPLCISSEEL 436 (451) T ss_pred HHCCCCEEEEEECCEEEEEEEECCCCCCCC---CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCHHHH T ss_conf 745998888761656899998536655787---99999999999999779888147873257899899978824889999 Q ss_pred HHHHHHHHHHHHHHH Q ss_conf 999999999999999 Q gi|254780153|r 369 LLLCDWLRWVFYFQK 383 (391) Q Consensus 369 ~~L~~aLe~~~~~~k 383 (391) T Consensus 437 d~~~~~l~~al~~v~ 451 (451) T PRK07678 437 AFVVGTLKTAMERIK 451 (451) T ss_pred HHHHHHHHHHHHHHC T ss_conf 999999999999639 |
|
| >PRK00011 glyA serine hydroxymethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.1e-08 Score=74.53 Aligned_cols=315 Identities=15% Similarity=0.158 Sum_probs=188.6 Q ss_pred CCHHHHHHHHHHHCCCC---------CCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC Q ss_conf 89689999863210365---------328988999-99999999999968899857999748734899987532057897 Q gi|254780153|r 23 KRPGWSLGILEGALLGR---------SHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG 92 (391) Q Consensus 23 ~~p~~v~~~~~~~~l~~---------sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~ 92 (391) T Consensus 37 ~S~~-v~~a~gS~l~nkYaEG~pg~RyY~G~~~iD~iE~la~~ra~~lF~a~--~-anVqp~SGs~AN~av~~all~PGD 112 (415) T PRK00011 37 VSPA-VMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKKLFGAE--Y-ANVQPHSGSQANAAVYFALLKPGD 112 (415) T ss_pred CCHH-HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC--C-CCCCCCCHHHHHHHHHHHHCCCCC T ss_conf 7999-99986472227577889984245665269999999999999983898--6-056778639999999999627898 Q ss_pred EEEEEE---CC-HHHHHHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEECC Q ss_conf 079970---73-688888765323876306740-57776578676785-----565799742024202203--2035025 Q gi|254780153|r 93 VDVLAW---ES-FGLGWMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIPE 160 (391) Q Consensus 93 ~~~~~~---g~-~~~r~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~~ 160 (391) T Consensus 113 ~im~l~l~~GGHltHg~~~~~~~~~-~~~~~y~~d~~~~~IDyd~~~~~a~~~kPklIi~G~-S~y~r~~d~~~~reIad 190 (415) T PRK00011 113 TILGMDLAHGGHLTHGSPVNFSGKL-YNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGA-SAYSRPIDFKKFREIAD 190 (415) T ss_pred EEEECCCCCCCCCCCCCCCCCCCCE-EEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEECC-CCCCCCCCHHHHHHHHH T ss_conf 5876686667876578675544652-478986786434816799999999860998899646-13533128899999999 Q ss_pred CCCCEEEEEECCHHHH-----CCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH Q ss_conf 6861488640110110-----25455685799970012001766515445677888765411445778312320011232 Q gi|254780153|r 161 SREGLVICDATSAVFA-----RHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391) Q Consensus 161 ~~~~llivD~vSs~g~-----~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391) T Consensus 191 ~vgA~l~~D~aHi~GLIA~g~~~~Pl~~ADvvt~tTHKTlrGPrG-GiIl~~~e~~~kId~a------------------ 251 (415) T PRK00011 191 EVGAYLMVDMAHIAGLVAAGVHPNPVPHADVVTTTTHKTLRGPRG-GLILTNEELAKKINSA------------------ 251 (415) T ss_pred HHCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCC-EEEEECCHHHHHHHCC------------------ T ss_conf 709889945355666664333799667756885453346789886-0797340666665412------------------ Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC Q ss_conf 10334786446664488999999998620103189999999977999999987479716766882003653178982473 Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDS 315 (391) Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~ 315 (391) T Consensus 252 ---VF-Pg~qggph~h~iAa~Aval~Ea~~~-~f~~Ya~qVv~NAk~La~~L~~~G-~~vv~--ggTdnHl-vlvdl~~~ 322 (415) T PRK00011 252 ---VF-PGIQGGPLMHVIAAKAVAFKEALEP-EFKEYAQQVVKNAKALAEALQERG-FKVVS--GGTDNHL-VLVDLRKK 322 (415) T ss_pred ---CC-CCCCCCCHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEEEE--CCCCCCE-EEEECCCC T ss_conf ---07-5314680477899999999998474-189999999999999999997689-77971--7987744-77645645 Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC--C--CC--CCCEEEEECCC----CCCHHHHHHHHHHHHHHHHH Q ss_conf 10113734567888999998886282872665--5--67--67505686158----88999999999999999999 Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGS--Y--RD--APLGLRVWVGV----TVEKEDLLLLCDWLRWVFYF 381 (391) Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~--r~--~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~ 381 (391) T Consensus 323 g~~----------G~~a~~~Le~~gI~vNkn~iP~d~~~~~~~SGiRiGt~a~TtrG~~e~em~~ia~~I~~~l~~ 388 (415) T PRK00011 323 GLT----------GKDAEAALEEANITVNKNAIPFDPRSPFVTSGIRIGTPAITTRGFKEAEMEEIAELIADVLDN 388 (415) T ss_pred CCC----------HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHC T ss_conf 688----------999999999859087558798999998888601436788974899889999999999999837 |
|
| >PRK06107 aspartate aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-08 Score=74.27 Aligned_cols=324 Identities=11% Similarity=0.012 Sum_probs=171.8 Q ss_pred HHHHHHHHHHHCCCCCCC-CH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCH Q ss_conf 689999863210365328-98--899999999999999968899857999748734899987532057897079970736 Q gi|254780153|r 25 PGWSLGILEGALLGRSHR-CV--LGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWESF 101 (391) Q Consensus 25 p~~v~~~~~~~~l~~sHR-s~--~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~~ 101 (391) T Consensus 48 p~~i~~a~~~al~~~~~~Y~~~~G~~eLReAia~~~~~~~g~~v~p~~I~vt~G~~~al~~~~~al~~pGD~Vlv~~P~Y 127 (402) T PRK06107 48 PDHIKAAAVAAIERGETKYTLVNGTPALRKAIIAKMERRNGLHYADNEICVGGGAKQAIFLALMATLEEGDEVIIPAPYW 127 (402) T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCC T ss_conf 89999999999855999996998889999999999999868999820499868889999999999579999899816866 Q ss_pred HHHHHHHHHHCCCCCEEE-EECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCC-CCEEEEE Q ss_conf 888887653238763067-4057776578676785-----5657997420242022032035-----02568-6148864 Q gi|254780153|r 102 GLGWMSDIRQLSLQDVRE-FTAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESR-EGLVICD 169 (391) Q Consensus 102 ~~r~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~-~~llivD 169 (391) T Consensus 128 ~~y~-~~~~~~g~~~~~~p~~~~~~~~~d~d~le~~~~~~tk~iil~~P~NPTG~v~s~~~l~~i~~i~~~~~~i~iisD 206 (402) T PRK06107 128 VSYP-DMVLANDGTPVIVPCPEEDGFKLTAEALEAAITPRTRWLILNAPSNPTGAAYSRDELRALADVLLRHPHVLVLTD 206 (402) T ss_pred CCHH-HHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE T ss_conf 5379-999983995673687823487589999997456476699988998989966534899999887752489328622 Q ss_pred ECCH---HHHCCCC--------CCCCEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH Q ss_conf 0110---1102545--------56857999700120017665--154456778887654114457783123200112321 Q gi|254780153|r 170 ATSA---VFARHID--------FNKLDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391) Q Consensus 170 ~vSs---~g~~p~d--------~~~iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391) T Consensus 207 EiY~~l~~~~~~~~~~~~~~p~~~~~~i~i~s~SK~~~-~~G~RiG~~v~~~~li~~l~~~~------------------ 267 (402) T PRK06107 207 DIYDHIRFDDEPVTHLLTAAPELRDRVLLTNGVSKTYA-MTGWRIGYAAGPADLIAAINKLQ------------------ 267 (402) T ss_pred HHHHHHEECCCCCCCHHHHCHHHHCCCEEECCCCCCCC-CCCCEEEEEEECHHHHHHHHHHH------------------ T ss_conf 20255221898888689858244225447424534567-76622689985899999999996------------------ Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE--CC Q ss_conf 0334786446664488999999998620103189999999977999999987479716766882003653178982--47 Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKI--VD 314 (391) Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~--~d 314 (391) T Consensus 268 -----~~~~~~~~~~~Q~aa~~aL~~~--~~~~~~~~~~y~~rrd~~~~~l~~~~g~~~~~P~g~~y~~~d~~~~~~~~~ 340 (402) T PRK06107 268 -----SQSSSCPSSISQAAAAAALNGD--QSFVAESVKVYKQRRDYALERLNAIPGLSCLVPDGAFYLYVNCAGLIGKTT 340 (402) T ss_pred -----HHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCCCCCC T ss_conf -----2434689899999999999688--478999999999999999998875799676279812798130510034458 Q ss_pred CCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 31011373456788899999-8886282872665567675056861588899999999999999999999 Q gi|254780153|r 315 SDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391) Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391) T Consensus 341 p~~~~--~~~----~~~f~~~ll~~~gV~v~PG~~FG~~~~~Ri~fa--~~~e~L~ea~~Rl~~al~~lr 402 (402) T PRK06107 341 PEGKV--LET----DTDVVLYLLDSVGVAVVQGTAYGLSPYFRMSIA--TSLETLEAGCDRIERAVAALR 402 (402) T ss_pred CCCCC--CCC----HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHCC T ss_conf 66566--568----899999999858999977853389982999971--999999999999999999649 |
|
| >PRK06917 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.5e-08 Score=72.37 Aligned_cols=335 Identities=13% Similarity=0.070 Sum_probs=174.6 Q ss_pred CHHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCC-CE Q ss_conf 9689999863210--365328988999999999999999688998579997487348999875320------5-789-70 Q gi|254780153|r 24 RPGWSLGILEGAL--LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSL------L-GYR-GV 93 (391) Q Consensus 24 ~p~~v~~~~~~~~--l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl------~-~~~-~~ 93 (391) T Consensus 49 ~p~-i~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p--~~~~~~~f~~SGsEAvE~AiKlA~~y~~~r~~t~r~~ 125 (447) T PRK06917 49 VKE-IADVIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEANETAMKIAIQHWQERGIQGKHK 125 (447) T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCE T ss_conf 799-9999999985388736664245899999999998578--8878799628789999999999999999838999848 Q ss_pred EEEEECCHHHHHHHHHHHCC---------C--CCEEEEECCC------CCCCC------HHHCC------CCCCEEEEEE Q ss_conf 79970736888887653238---------7--6306740577------76578------67678------5565799742 Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLS---------L--QDVREFTAPY------GSLPD------FSKVD------FDRDVVFVWN 144 (391) Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~---------~--~~~~~~~~~~------g~~~~------~~~~~------~~~~v~~~h~ 144 (391) T Consensus 126 Iis~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~ 205 (447) T PRK06917 126 ILSRWMSYHGITMGALSMSGHPLRRQRFVSILEDYPTISAPYCYRCPVQKVYPTCQLACATELERSIERIGAEHIAAFIA 205 (447) T ss_pred EEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 99950551466660366238821147878878897744898655777776540358999999999999738877469997 Q ss_pred ECCCC----EEECC------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCC-CCCEEEEECH Q ss_conf 02420----22032------0350256861488640110-110--254--5568579997001200176-6515445677 Q gi|254780153|r 145 GTTSG----VCVPD------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP 208 (391) Q Consensus 145 ETstG----v~~~~------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~ 208 (391) T Consensus 206 EPi~g~~Gg~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDii~~gK~l~gG~~Pl~av~~~~ 285 (447) T PRK06917 206 EPIIGAAGGAVVPPKGYYKVIKDICSHYDILFIADEVMTGLGRTGAWFAMEHWGVEPDIMTLGKGLGAGYTPMAATVVSD 285 (447) T ss_pred CCCEECCCCCEECCHHHHHHHHHHHHHCCCEEEEEECEECCCCCCCCCHHHHCCCCCCEEEECHHHCCCCCCEEEEEECH T ss_conf 13030579716468789999999965269528974110078756874315335989778977401118987738998818 Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987 Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391) Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391) T Consensus 286 ~i~~~~~~g--~~----------------~~~~g~Tf~gnpl-a~aaa~a~L~~l~~~~----l~~~~~~~G~~l~~~L~ 342 (447) T PRK06917 286 RVMEPILRG--SR----------------SVMSGHTLSANPL-SAATALAVIEYMEKHN----LPEKTAEKGEYLIKGLQ 342 (447) T ss_pred HHHHHHCCC--CC----------------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHH T ss_conf 988654058--87----------------6201778989999-9999999999998645----99999999999999999 Q ss_pred HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCC--C-CCCCCCEEEEECCCCCCH Q ss_conf 4797167668820036531789824731011373456788899999888628287266--5-567675056861588899 Q gi|254780153|r 289 ENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIG--S-YRDAPLGLRVWVGVTVEK 365 (391) Q Consensus 289 ~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~-~r~~~~~~RIg~~g~i~~ 365 (391) T Consensus 343 ~l~~~~~~i~dVRG~GLm~giel~~d~~~~~-~~~~~~~~a~~i~~~~~~~Gll~~~~~~~~~g~~~~~lrl~PPL~it~ 421 (447) T PRK06917 343 EVQQQSTIIGDVRGKGLLIGVEFVADQKTKK-PFPQPFSKASELISVAAKNGLLLYPAVSGQAGKEGSALLIAPPMTTTY 421 (447) T ss_pred HHHHCCCCEEEEEECCEEEEEEEECCCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCCH T ss_conf 9986399778765156169999842665567-787248999999999997898898744567789999899979922789 Q ss_pred HHHHHHHHHHHHHHHHHHHH Q ss_conf 99999999999999999998 Q gi|254780153|r 366 EDLLLLCDWLRWVFYFQKIS 385 (391) Q Consensus 366 ~dv~~L~~aLe~~~~~~k~~ 385 (391) T Consensus 422 ~eid~~i~~l~~al~ev~~~ 441 (447) T PRK06917 422 SELDELLSIFAKSVEEMMQK 441 (447) T ss_pred HHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999999983 |
|
| >PRK03244 argD acetylornithine aminotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.8e-09 Score=75.55 Aligned_cols=308 Identities=17% Similarity=0.129 Sum_probs=176.0 Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCC-EEEEEECCH Q ss_conf 96899998632103653289889-9999999999999968899857999748734899987532057897-079970736 Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRG-VDVLAWESF 101 (391) Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~-~~~~~~g~~ 101 (391) T Consensus 61 ~p~-i~~ai~~q~~~l~~~~~~~~~~~~~~lae~L~~~~~~~~~~kvff-~~SGsEA~E~AlKlAr~tgr~~Iis~~~sY 138 (398) T PRK03244 61 HPA-VVEAVTRQLATLGHVSNLFATEPQIALAERLVALLGAPEGARVFF-CNSGAEANEAAFKLARLTGRTKIVAAEGGF 138 (398) T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE-ECCHHHHHHHHHHHHHHCCCCEEEEEECCC T ss_conf 899-999999999754777565358699999999998608996567997-186778999999999982998799983877 Q ss_pred HHHHHHHHHHCCCC---------CEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECCE------EEECCCCC Q ss_conf 88888765323876---------3067405777657867678556579974202420---220320------35025686 Q gi|254780153|r 102 GLGWMSDIRQLSLQ---------DVREFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPDV------GFIPESRE 163 (391) Q Consensus 102 ~~r~~~~~~~~~~~---------~~~~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~~------~~~~~~~~ 163 (391) T Consensus 139 HG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~~d~~~l~~~-~~~~iAAii~EPiqg~gG~~~~~~~fl~~l~~lc~~~g 217 (398) T PRK03244 139 HGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAA-VDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHG 217 (398) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHH-HCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC T ss_conf 68876542336885312346788787277157866899997-38985899985876889985688889999999985734 Q ss_pred CEEEEEECCHHHHCCCCC-----CCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH Q ss_conf 148864011011025455-----685--7999700120017665154456778887654114457783123200112321 Q gi|254780153|r 164 GLVICDATSAVFARHIDF-----NKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391) Q Consensus 164 ~llivD~vSs~g~~p~d~-----~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391) T Consensus 218 illI~DEV~tGfGRtG~~fa~e~~~v~PDIv~~g--K~lggG~P~sa~~~~~~~~~~~---~------------------ 274 (398) T PRK03244 218 ALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLA--KGLGGGLPIGACLAFGPAADLL---T------------------ 274 (398) T ss_pred CCEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEC--CCCCCCCCCEEEEECHHHHHHC---C------------------ T ss_conf 5366662124877667861565337999889973--2024887616889718888641---7------------------ Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE-EECCC Q ss_conf 03347864466644889999999986201031899999999779999999874797167668820036531789-82473 Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICM-KIVDS 315 (391) Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~-~~~d~ 315 (391) T Consensus 275 -~~~h~~T~~gnpl-~~aaa~a~L~~i~~~~----l~~~v~~~g~~l~~~L~~l~--~~~i~--~VRG~Gl~~giel~~- 343 (398) T PRK03244 275 -PGLHGSTFGGNPV-ACAAALAVLRVIADEG----LLENAERLGKQLRAGIEALG--HPLVD--HVRGRGLLLGIVLTA- 343 (398) T ss_pred -CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHCC--CCCEE--EEEEEEEEEEEEECC- T ss_conf -8876747898989-9999999999997557----99999999999999998548--98614--100126899999667- Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 10113734567888999998886282872665567675056861588899999999999999999999 Q gi|254780153|r 316 DIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQK 383 (391) Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k 383 (391) T Consensus 344 -------~----~~~~~~~~~~~~Gll~~~~g----~n~ir~~PPl~it~~eid~~~~~l~~~L~~~a 396 (398) T PRK03244 344 -------P----VAKAVEAAAREAGFLVNAPA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398) T ss_pred -------C----HHHHHHHHHHHCCCEECCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf -------3----19999999996891993189----99799949957899999999999999999985 |
|
| >PRK07212 consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.1e-08 Score=72.79 Aligned_cols=306 Identities=13% Similarity=0.084 Sum_probs=165.2 Q ss_pred HHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC Q ss_conf 689999863210----365328988999999999999999688998-579997487348999875320578970799707 Q gi|254780153|r 25 PGWSLGILEGAL----LGRSHRCVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99 (391) Q Consensus 25 p~~v~~~~~~~~----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g 99 (391) T Consensus 46 p~~i~ea~~~~~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~g~~v~p~~I~v-t~G~~~al~~~~~~l~~pGD~Vlv~~P 123 (378) T PRK07212 46 PKHICDAAIDAMDRGKTHYAP-SNGIPELREAIAEKLRTENHIDVTPDDVIV-TPGAKQAIYEAMMAVLDDGDEVILLDP 123 (378) T ss_pred CHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCHHEEEE-ECCHHHHHHHHHHHHCCCCCEEEEECC T ss_conf 899999999998579998899-999999999999999998489987331999-478999999999984799898998179 Q ss_pred CHHHHHHHHHHHCCCCCEEEEE--CCCCCCCC-HHH-C-CCCCCEEEEEEECCCCEEECCEEE-----ECCCCCCEEEEE Q ss_conf 3688888765323876306740--57776578-676-7-855657997420242022032035-----025686148864 Q gi|254780153|r 100 SFGLGWMSDIRQLSLQDVREFT--APYGSLPD-FSK-V-DFDRDVVFVWNGTTSGVCVPDVGF-----IPESREGLVICD 169 (391) Q Consensus 100 ~~~~r~~~~~~~~~~~~~~~~~--~~~g~~~~-~~~-~-~~~~~v~~~h~ETstGv~~~~~~~-----~~~~~~~llivD 169 (391) T Consensus 124 ~Y~~y~-~~~~~~g-~~~v~vpl~~~~~~~~~~l~~~i~~~~k~i~l~~P~NPtG~v~s~~~l~~l~~la~~~~~~ii~D 201 (378) T PRK07212 124 AWVSYE-ACIKFAG-GKPVWVPLNPEDFQLPDDLAEAITDKTKLIVVNSPSNPTGAVFGKESLQGVADLAVDHDLYVLSD 201 (378) T ss_pred CCCCHH-HHHHHCC-CEEEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCC T ss_conf 634256-8999719-96999835556785289999856657829998899799898847176889999777424501330 Q ss_pred ECCH---HHHCCCCC---CC---CEEEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCC Q ss_conf 0110---11025455---68---57999700120017665--15445677888765411445778312320011232103 Q gi|254780153|r 170 ATSA---VFARHIDF---NK---LDVVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEG 238 (391) Q Consensus 170 ~vSs---~g~~p~d~---~~---iDv~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (391) T Consensus 202 EiY~~l~~~~~~~~~~~l~~~~~~~i~~~S~SK~~~-l~GlRvG~~~~~~~~i~~~~~~~-------------------- 260 (378) T PRK07212 202 EIYEKIIYGKEHISLGSLDGMADRTITINGFSKAYA-MTGWRLGYLTAPEEIIKQMGKVQ-------------------- 260 (378) T ss_pred CCHHHHHCCCCCCCHHHCCCCCCCCCEECCCCCCCC-CCCEEEEEEECCHHHHHHHHHHH-------------------- T ss_conf 011544048877774334454555403335421367-77604898973999999999998-------------------- Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC Q ss_conf 34786446664488999999998620103189999999977999999987479716766882003653178982473101 Q gi|254780153|r 239 LFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIA 318 (391) Q Consensus 239 ~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~ 318 (391) T Consensus 261 ---~~~~~~~~~~~q~aa~~al~~~~--~~l~~~~~~~~~~r~~l~~~L~~~g-~~~~~--p~--g~~~~~~~~~~---- 326 (378) T PRK07212 261 ---SHSVSSATTFVQYGGVAALKGPQ--DCVEEMRDEFEARRDILIDGLADMG-LECAP--PD--GAFYAFPNVDG---- 326 (378) T ss_pred ---HHCCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCC-CEECC--CC--EEEEEEEECCC---- T ss_conf ---64557887699999999996877--8899999999999999999999769-86626--88--16999997899---- Q ss_pred CCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 1373456788899999888628287266556767505686158889999999999999999 Q gi|254780153|r 319 SLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391) Q Consensus 319 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391) T Consensus 327 --~---~~~~---~~~ll~~~gV~v~pG~~Fg~~g~iRl~~a~--~~e~l~eal~RL~~~L 377 (378) T PRK07212 327 --D---DTAV---AERLLKDAHVAVTPGSAFGAPGWIRISYAT--SMERLKEALERLEKVL 377 (378) T ss_pred --C---HHHH---HHHHHHHCCEEEEECCCCCCCCEEEEEEEC--CHHHHHHHHHHHHHHH T ss_conf --9---9999---999997098999817445999939999808--9999999999999985 |
|
| >PRK07543 consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.5e-09 Score=75.31 Aligned_cols=318 Identities=10% Similarity=0.025 Sum_probs=163.6 Q ss_pred HHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC Q ss_conf 689999863210365328---988999999999999999688998-5799974873489998753205789707997073 Q gi|254780153|r 25 PGWSLGILEGALLGRSHR---CVLGKERINKAIQLTRKVLEVPEN-YRIAIVPASDTGAVEMALWSLLGYRGVDVLAWES 100 (391) Q Consensus 25 p~~v~~~~~~~~l~~sHR---s~~f~~i~~~~~~~l~~l~~~p~~-y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g~ 100 (391) T Consensus 46 p~~i~~a~~~al~~~~~~Y~~~~G~~eLR~aia~~~~~~~g~~~~pd~V~v-t~G~~~al~~~~~al~~pGD~Vlv~~P~ 124 (400) T PRK07543 46 PDNIKQAAIAAINAGKTKYTAVDGIPELKQAICAKFKRENGLDYKPEQVIV-GTGGKQILYNALMATLNPGDEVIIPAPY 124 (400) T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCCHHHHHHHHHHHCCCCCEEEEECCC T ss_conf 999999999998459998989988099999999999998489988042899-2782699999999857999989982786 Q ss_pred HHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEECCEEE-----ECCCC-CCEEEE Q ss_conf 68888876532387630674-057776578676785-----5657997420242022032035-----02568-614886 Q gi|254780153|r 101 FGLGWMSDIRQLSLQDVREF-TAPYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVPDVGF-----IPESR-EGLVIC 168 (391) Q Consensus 101 ~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~~~~~-----~~~~~-~~lliv 168 (391) T Consensus 125 Y~~y~-~~~~~~g~~~v~v~~~~e~~~~~d~~~le~~i~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~~~~~~~v~iis 203 (400) T PRK07543 125 WVSYP-EMVALAGGTPVFVETTAEFGFKLTPEALEAAITPKTKWFIFNSPSNPTGAAYTRAELKALTDVLVKHPHVWVLT 203 (400) T ss_pred CCCCH-HHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECC T ss_conf 65536-89998088359952463337543847789747866719998799898883764167899999888753860313 Q ss_pred EECCHH---HHCC------CCCCCCE--EEEECCHHCCCCCCC--CEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHH Q ss_conf 401101---1025------4556857--999700120017665--15445677888765411445778312320011232 Q gi|254780153|r 169 DATSAV---FARH------IDFNKLD--VVTFSAQKVLGGEAG--FGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRV 235 (391) Q Consensus 169 D~vSs~---g~~p------~d~~~iD--v~~a~sQK~l~~ppG--l~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~ 235 (391) T Consensus 204 DEiY~~l~~~~~~~~~~~~~~p~~~~~~i~~~s~SK~~~-~~G~RiG~~~~p~~li~~~~~~~----------------- 265 (400) T PRK07543 204 DDMYEHLVYDDFVFTTPAQVEPSLYDRTLTMNGVSKAYA-MTGWRIGYAAGPAELIKAMDTIQ----------------- 265 (400) T ss_pred HHHHHHHHCCCCCCCCHHHCCHHHHCCCCCCCCCCHHCC-CCCCCEEEEECCHHHHHHHHHHH----------------- T ss_conf 124566414897889967829022103420377405206-83430488867899999999999----------------- Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC-- Q ss_conf 103347864466644889999999986201031899999999779999999874797167668820036531789824-- Q gi|254780153|r 236 MEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIV-- 313 (391) Q Consensus 236 ~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~-- 313 (391) T Consensus 266 ------~~~~~~~~~~~Q~aa~~al~~~~--~~~~~~~~~~~~rrd~~~~~L~~~~g~~~~~P~g~fy----~~~~~~~~ 333 (400) T PRK07543 266 ------SQSTSNPCSIAQWAAVEALNGPQ--DFIPANKKIFQERRDLVVSMLNQAKGIDCPTPEGAFY----VYPSCAGL 333 (400) T ss_pred ------HHHCCCCCHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE----EEECCHHH T ss_conf ------75046766099999999985859--9999999999999999999998677984679986689----82110323 Q ss_pred ----CCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf ----731011373456788899999-888628287266556767505686158889999999999999999999 Q gi|254780153|r 314 ----DSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391) Q Consensus 314 ----d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391) T Consensus 334 ~~~~~p~~~~~--~~~----~~f~~~ll~~~gV~v~PG~~FG~~~~~Ri~~a--~~~e~l~ea~~Rl~~f~~~l 399 (400) T PRK07543 334 IGKTTPSGKVI--ETD----EDFVTELLETEGVAVVHGSAFGLGPNFRISYA--TSDELLEEACKRIQRFCASL 399 (400) T ss_pred HHCCCCCCCCC--CCH----HHHHHHHHHHCCEEEECCCCCCCCCCEEEEEC--CCHHHHHHHHHHHHHHHHHC T ss_conf 20037556767--999----99999999849999984701089999899975--98999999999999999965 |
|
| >cd00610 OAT_like Acetyl ornithine aminotransferase family | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.6e-09 Score=75.63 Aligned_cols=319 Identities=16% Similarity=0.128 Sum_probs=168.7 Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEEC Q ss_conf 96899998632103653289889--999999999999996889985799974873489998753205--78970799707 Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG--KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWE 99 (391) Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f--~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g 99 (391) T Consensus 54 ~p~-v~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGsEA~e~AiklAr~~t~r~~ii~~~~ 130 (413) T cd00610 54 HPE-VVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEG 130 (413) T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECC T ss_conf 889-9999999997489725786688899999999998569--9848799818777999999999999739988999868 Q ss_pred CHHHHHHHHHHHCC---------C--CCEEEEECCCCC------CCCHHHCC-----CCCCEEEEEEECCCC---EEECC Q ss_conf 36888887653238---------7--630674057776------57867678-----556579974202420---22032 Q gi|254780153|r 100 SFGLGWMSDIRQLS---------L--QDVREFTAPYGS------LPDFSKVD-----FDRDVVFVWNGTTSG---VCVPD 154 (391) Q Consensus 100 ~~~~r~~~~~~~~~---------~--~~~~~~~~~~g~------~~~~~~~~-----~~~~v~~~h~ETstG---v~~~~ 154 (391) T Consensus 131 ~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~l~~~~~~~~~~iAavi~EPi~g~~G~~~~~ 210 (413) T cd00610 131 AYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPP 210 (413) T ss_pred CCCCCCHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC T ss_conf 84787663344137832245778888996680898765554322778999999997389978999997987889987388 Q ss_pred ------EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCC Q ss_conf ------0350256861488640110-110--254--55685799970012001766515445677888765411445778 Q gi|254780153|r 155 ------VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPL 223 (391) Q Consensus 155 ------~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~ 223 (391) T Consensus 211 ~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~lggG~Pisav~~~~~i~~~~~~---~-~- 285 (413) T cd00610 211 PGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFPA---G-P- 285 (413) T ss_pred HHHHHHHHHHEEECCCEEEEEECEECCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHC---C-C- T ss_conf 8997888632860580698520200777545431233258178756523345688986047775999998633---8-8- Q ss_pred CCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 31232001123210334786446664488999999998620103189999999977999999987479716766882003 Q gi|254780153|r 224 PKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTR 303 (391) Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~r 303 (391) T Consensus 286 ---------------~~h~~T~~gnp~-~~Aaa~a~L~~i~~e~----l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vr 343 (413) T cd00610 286 ---------------GLHGGTFGGNPL-ACAAALAVLEVLEEEG----LLENAAELGEYLRERLRELAEKHPLVGD--VR 343 (413) T ss_pred ---------------CEECCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCCEE--EE T ss_conf ---------------506778888849-9999999999984256----9999999999999999999974899369--64 Q ss_pred CCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH Q ss_conf 65317-89824731011373456788899999888628287266556767505686158889999999999999999 Q gi|254780153|r 304 SNTSI-CMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391) Q Consensus 304 S~~~v-~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391) T Consensus 344 G~Gl~~gie~~~~~~~~---~~~~~~~~~i~~~~~~~Gvl~~~~g----~~~l~~~Ppl~it~~eid~~~~~l~~aL 413 (413) T cd00610 344 GRGLMIGIELVKDRATK---PPDKELAAKIIKAALERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413) T ss_pred EECEEEEEEEECCCCCC---CCCHHHHHHHHHHHHHCCEEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHC T ss_conf 32449999993687767---7589999999999997994891179----9989997883689999999999999869 |
This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation. |
| >PRK07481 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.4e-09 Score=77.86 Aligned_cols=334 Identities=13% Similarity=0.075 Sum_probs=167.7 Q ss_pred CHHHHHHHHHHHCCCCCCCCH--HH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC------C-CC-C Q ss_conf 968999986321036532898--89-999999999999996889985799974873489998753205------7-89-7 Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCV--LG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL------G-YR-G 92 (391) Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~--~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~------~-~~-~ 92 (391) T Consensus 60 ~p~-v~~Ai~~q~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-p~~~~rv~f~~SGseA~E~AiKlAr~y~~~~g~~~r~ 137 (448) T PRK07481 60 REE-VKEAIVRQLDELEYYSTFDGTTHPRAIELSYKLIDMFE-PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERT 137 (448) T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC T ss_conf 799-99999999965677136664468899999999998518-7787889974977999999999999999971898863 Q ss_pred EEEEEECCHHHHHHHHHHHCC-----------CCCEEEEEC------CCCCCCC------HHHC------CCCCCEEEEE Q ss_conf 079970736888887653238-----------763067405------7776578------6767------8556579974 Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLS-----------LQDVREFTA------PYGSLPD------FSKV------DFDRDVVFVW 143 (391) Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~-----------~~~~~~~~~------~~g~~~~------~~~~------~~~~~v~~~h 143 (391) T Consensus 138 ~Ii~~~~syHG~t~g~~s~sg~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi 217 (448) T PRK07481 138 KFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTQDPEELGRLCARLLEREIAFQGPDTIAAFI 217 (448) T ss_pred EEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE T ss_conf 69963686377662212146884344688899998278268752237778998999999999999998741888479999 Q ss_pred EECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECH Q ss_conf 202420---22032------035025686148864011011025---4--5568579997001200176-6515445677 Q gi|254780153|r 144 NGTTSG---VCVPD------VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSP 208 (391) Q Consensus 144 ~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~ 208 (391) T Consensus 218 ~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~lggG~~Plsa~~~~~ 297 (448) T PRK07481 218 AEPVQGAGGVIVPPANYWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGISSGYVPLGATMVNA 297 (448) T ss_pred EECCCCCCCEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHCCH T ss_conf 60466679714599999999999999779279995145388847632576568999971001224358977642111568 Q ss_pred HHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 88876541144577831232001123210334786446664488999999998620103189999999977999999987 Q gi|254780153|r 209 ASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQ 288 (391) Q Consensus 209 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~ 288 (391) T Consensus 298 ~i~~~~~~~~~~~---------------~~~~hg~T~~gnpl-a~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~ 361 (448) T PRK07481 298 RIEDAFEANADFG---------------GAIMHGYTYSGHPV-ACAAALASLDIVVREDLPANAAKRGAYLLEGLQPLVE 361 (448) T ss_pred HHHHHHCCCCCCC---------------CCCCCCCCCCCCHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999765688766---------------52100667788979-9999999999997556999999999999999999998 Q ss_pred HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHH Q ss_conf 47971676688200365317898247310113734567888999998886282872665567675056861588899999 Q gi|254780153|r 289 ENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDL 368 (391) Q Consensus 289 ~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv 368 (391) T Consensus 362 ~~----~~i~~VRG~Glm~~ielv~d~~~~~-~~~~~~~~~~~v~~~~~~~Gll~~~-----~g~~i~~~PpL~it~~ei 431 (448) T PRK07481 362 RF----ELVGDVRGKGLMVALDLVADKATRA-PIDPSKGYANAVADVARENGVLVRP-----SGTKIILSPPLVIQREDV 431 (448) T ss_pred HC----CCEEEEEECCEEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHCCEEEEE-----CCCEEEEECCCCCCHHHH T ss_conf 48----9846755224999999960665567-6771279999999999969949972-----499899989978899999 Q ss_pred HHHHHHHHHHHHHHHHH Q ss_conf 99999999999999998 Q gi|254780153|r 369 LLLCDWLRWVFYFQKIS 385 (391) Q Consensus 369 ~~L~~aLe~~~~~~k~~ 385 (391) T Consensus 432 d~~l~~l~~al~~v~~~ 448 (448) T PRK07481 432 DRIVDALDAGFAAVPFQ 448 (448) T ss_pred HHHHHHHHHHHHHHCCC T ss_conf 99999999999975339 |
|
| >PRK07482 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-08 Score=71.83 Aligned_cols=337 Identities=12% Similarity=0.026 Sum_probs=173.0 Q ss_pred CHHHHHHHHHHHCC--CCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH------CCCC-C-C Q ss_conf 96899998632103--653289889-9999999999999968899857999748734899987532------0578-9-7 Q gi|254780153|r 24 RPGWSLGILEGALL--GRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS------LLGY-R-G 92 (391) Q Consensus 24 ~p~~v~~~~~~~~l--~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n------l~~~-~-~ 92 (391) T Consensus 68 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~-l~~v~f-~~SGSEAvE~AiKlAr~y~~~~g~~~r~ 144 (461) T PRK07482 68 RTE-VAEAIAEQAKELAYYHTYVGHGTEASIELSKRIIDRAPAG-MSKVYY-GLSGSDANETQIKLVWYYNNVLGRPEKK 144 (461) T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCEEEE-CCCHHHHHHHHHHHHHHHHHHHCCCCCC T ss_conf 499-9999999996587611467756889999999999757888-687996-1866999999999999998861887654 Q ss_pred EEEEEECCHHHHHHHHHHHCC-----------CCCEEEEECCC-------CCCCC------HHHCC------CCCCEEEE Q ss_conf 079970736888887653238-----------76306740577-------76578------67678------55657997 Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLS-----------LQDVREFTAPY-------GSLPD------FSKVD------FDRDVVFV 142 (391) Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~-----------~~~~~~~~~~~-------g~~~~------~~~~~------~~~~v~~~ 142 (391) T Consensus 145 ~Iis~~~syHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAv 224 (461) T PRK07482 145 KIISRWRGYHGSGIVTGSLTGLSLFHQHFDLPIDRVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAF 224 (461) T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE T ss_conf 59996178556753130024663334666799878322468854567886633777789999999999985098848999 Q ss_pred EEECCCC---EEECC------EEEECCCCCCEEEEEECCHHHHC---CC--CCCCCEEEEECCHHCCCCC-CCCEEEEEC Q ss_conf 4202420---22032------03502568614886401101102---54--5568579997001200176-651544567 Q gi|254780153|r 143 WNGTTSG---VCVPD------VGFIPESREGLVICDATSAVFAR---HI--DFNKLDVVTFSAQKVLGGE-AGFGIIILS 207 (391) Q Consensus 143 h~ETstG---v~~~~------~~~~~~~~~~llivD~vSs~g~~---p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s 207 (391) |