HHsearch alignment for GI: 254780153 and conserved domain: COG0112
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism].
Probab=99.01 E-value=3e-07 Score=65.47 Aligned_cols=313 Identities=15% Similarity=0.132 Sum_probs=182.1
Q ss_pred HHHHHHHHCCCC------CCC---CHHHHHHHH-HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 999863210365------328---988999999-9999999996889985799974873489998753205789707997
Q gi|254780153|r 28 SLGILEGALLGR------SHR---CVLGKERIN-KAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA 97 (391)
Q Consensus 28 v~~~~~~~~l~~------sHR---s~~f~~i~~-~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~ 97 (391)
T Consensus 42 V~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~---anVQPhSGs~AN~av~~All~pGD~imgm 118 (413)
T COG0112 42 VMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEY---ANVQPHSGSQANQAVYLALLQPGDTIMGL 118 (413)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHHHCCCCCEEEEC
T ss_conf 999974577530115899763567872179999999999999848875---04588875689999999973898857505
Q ss_pred ---ECC-HHHH-HHHHHHHCCCCCEEEEE-CCCCCCCCHHHCCC-----CCCEEEEEEECCCCEEEC--CEEEECCCCCC
Q ss_conf ---073-6888-88765323876306740-57776578676785-----565799742024202203--20350256861
Q gi|254780153|r 98 ---WES-FGLG-WMSDIRQLSLQDVREFT-APYGSLPDFSKVDF-----DRDVVFVWNGTTSGVCVP--DVGFIPESREG 164 (391)
Q Consensus 98 ---~g~-~~~r-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~v~~~h~ETstGv~~~--~~~~~~~~~~~ 164 (391)
T Consensus 119 ~l~~GGHltHg~~v~~sG~~--~~~v~Y~vd~et~~IDyD~~~k~a~e~kPKlii~G~-SaY~r~id~~~~reIad~VGA 195 (413)
T COG0112 119 DLSHGGHLTHGSPVNFSGKL--FNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGG-SAYSRPIDFKRFREIADEVGA 195 (413)
T ss_pred CCCCCCCCCCCCCCCCCCCE--EEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECC-CCCCCCCCHHHHHHHHHHHCC
T ss_conf 67878765579987766405--776762406334751799999999984997899776-035544678999999987193
Q ss_pred EEEEEECCHHH-----HCCCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCC
Q ss_conf 48864011011-----0254556857999700120017665154456778887654114457783123200112321033
Q gi|254780153|r 165 LVICDATSAVF-----ARHIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGL 239 (391)
Q Consensus 165 llivD~vSs~g-----~~p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (391)
T Consensus 196 ~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrGG~Il~~~eel~kkin~aV----F---------------- 255 (413)
T COG0112 196 YLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRGGIILTNDEELAKKINSAV----F---------------- 255 (413)
T ss_pred EEEEHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHC----C----------------
T ss_conf 67721778888874566799987552675775347789984179836299998764000----7----------------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 47864466644889999999986201031899999999779999999874797167668820036531789824731011
Q gi|254780153|r 240 FCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIAS 319 (391)
Q Consensus 240 ~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~ 319 (391)
T Consensus 256 --Pg~qggpl~HviAakaVa~~Eal~p-~fk~Ya~qVv~NAkaLAe~l~~~G-~~vvs--GgTdnHl-~lVDl~~~~~~- 327 (413)
T COG0112 256 --PGLQGGPLMHVIAAKAVAFKEALEP-EFKEYAKQVVKNAKALAEALKERG-FKVVS--GGTDNHL-VLVDLRSKGLT- 327 (413)
T ss_pred --CCCCCCHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHCC-CEEEC--CCCCCEE-EEEECCCCCCC-
T ss_conf --7667882788899999999997281-389999999999999999999769-86715--8864448-99972467987-
Q ss_pred CCHHHHHHHHHHHHHHHHHCCEEECCCCC------CCCCCEEEEECCC----CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 37345678889999988862828726655------6767505686158----8899999999999999999999
Q gi|254780153|r 320 LDINSQKSFCKSMLSFLEKEEIAYDIGSY------RDAPLGLRVWVGV----TVEKEDLLLLCDWLRWVFYFQK 383 (391)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~------r~~~~~~RIg~~g----~i~~~dv~~L~~aLe~~~~~~k 383 (391)
T Consensus 328 ---------Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 328 ---------GKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred ---------HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf ---------78999999970976526889999988878766340668886357988999999999999995500